##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727140.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11631322 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.911500859489575 33.0 31.0 34.0 30.0 34.0 2 32.14435917086639 33.0 31.0 34.0 30.0 34.0 3 32.26178400013343 34.0 31.0 34.0 30.0 34.0 4 35.88596300575291 37.0 35.0 37.0 35.0 37.0 5 35.58080311077279 37.0 35.0 37.0 33.0 37.0 6 35.59449880245771 37.0 35.0 37.0 33.0 37.0 7 35.55712403112905 37.0 35.0 37.0 33.0 37.0 8 35.52184850526879 37.0 35.0 37.0 33.0 37.0 9 37.33927983422693 39.0 37.0 39.0 34.0 39.0 10 37.15501789048571 39.0 37.0 39.0 33.0 39.0 11 37.24227349221353 39.0 37.0 39.0 34.0 39.0 12 37.14209046916593 39.0 37.0 39.0 33.0 39.0 13 37.220230254136204 39.0 37.0 39.0 34.0 39.0 14 38.40299967621909 40.0 38.0 41.0 34.0 41.0 15 38.35542451666285 40.0 38.0 41.0 34.0 41.0 16 38.3132634450323 40.0 38.0 41.0 34.0 41.0 17 38.26504459252353 40.0 38.0 41.0 33.0 41.0 18 38.26257883669629 40.0 38.0 41.0 33.0 41.0 19 38.30745524885305 40.0 38.0 41.0 34.0 41.0 20 38.22381643290419 40.0 38.0 41.0 34.0 41.0 21 38.181070646999544 40.0 38.0 41.0 33.0 41.0 22 38.118120107069515 40.0 38.0 41.0 33.0 41.0 23 38.06395051224616 40.0 37.0 41.0 33.0 41.0 24 37.980131837120496 40.0 37.0 41.0 33.0 41.0 25 37.95276925529188 40.0 37.0 41.0 33.0 41.0 26 37.799104693344404 40.0 37.0 41.0 33.0 41.0 27 37.66941169713984 40.0 37.0 41.0 32.0 41.0 28 37.593413371240175 39.0 37.0 41.0 32.0 41.0 29 37.498727057852925 39.0 37.0 41.0 32.0 41.0 30 37.46643502776383 39.0 37.0 41.0 32.0 41.0 31 37.429152421367064 39.0 37.0 41.0 32.0 41.0 32 37.33020433962709 39.0 36.0 41.0 31.0 41.0 33 37.267911334584326 39.0 36.0 41.0 31.0 41.0 34 37.2415403855211 39.0 36.0 41.0 31.0 41.0 35 37.175124977195196 39.0 36.0 41.0 31.0 41.0 36 37.08013139005179 39.0 36.0 40.0 31.0 41.0 37 37.01141125660523 39.0 36.0 40.0 31.0 41.0 38 36.97956259830138 39.0 36.0 40.0 31.0 41.0 39 36.89243699039542 39.0 36.0 40.0 30.0 41.0 40 36.8242934036217 39.0 36.0 40.0 30.0 41.0 41 36.78520747684571 39.0 35.0 40.0 30.0 41.0 42 36.68279487060886 39.0 35.0 40.0 30.0 41.0 43 35.40516985085616 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 8.0 10 20.0 11 18.0 12 11.0 13 14.0 14 11.0 15 23.0 16 49.0 17 98.0 18 225.0 19 573.0 20 1254.0 21 2861.0 22 5697.0 23 10150.0 24 17610.0 25 29368.0 26 45846.0 27 69188.0 28 100418.0 29 143048.0 30 194852.0 31 258987.0 32 340231.0 33 445530.0 34 591268.0 35 802702.0 36 1132037.0 37 1713628.0 38 2988693.0 39 2736900.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.34130049877392 18.629215148544592 12.651975416036112 26.377508936645377 2 18.23717028898349 20.547208649197398 36.021253645974205 25.194367415844905 3 19.737128763179285 22.438386625355225 29.946131660700303 27.878352950765183 4 14.933160650182325 15.667986837609687 34.23958170876879 35.1592708034392 5 15.418513905813974 35.44688213429222 34.03603648837166 15.098567471522154 6 35.19900833284471 34.29041857838688 15.364074694174917 15.146498394593493 7 29.13668798783148 30.044194460440526 21.540449142410466 19.278668409317532 8 25.99170584392729 35.08331211189923 19.78538639030026 19.139595653873222 9 26.340531196711776 15.014699102991043 19.872341252352914 38.77242844794427 10 17.160001244914376 26.450914178113198 33.360713425352685 23.02837115161974 11 35.45540223200768 21.910793975095867 21.649310370738597 20.98449342215786 12 21.229667616458386 24.76655706032384 30.560326676537713 23.44344864668006 13 30.5835656514367 19.972484641040804 24.413518944794067 25.030430762728432 14 22.149717805078392 20.650980172331227 25.730170654720077 31.469131367870308 15 24.895321443254687 27.63893046723322 22.67638192803879 24.789366161473307 16 24.446344104307318 26.234232015930775 24.73339659928596 24.586027280475943 17 23.77832889503016 26.40642224503801 25.712563025939783 24.102685833992044 18 23.977033737007712 25.66108994317241 26.293288071639665 24.068588248180216 19 24.792409667619896 25.41793615549462 26.546397735356308 23.243256441529176 20 24.357626759881637 25.290272249362538 26.467025846245164 23.885075144510658 21 24.095859438849683 25.502905000824498 26.61480784385472 23.786427716471096 22 24.61114910239782 25.100319636925196 26.056539402829703 24.231991857847284 23 24.121041443096495 25.356790913363074 26.143906943681895 24.378260699858536 24 24.070961151277558 25.368449089450024 26.163853085659568 24.396736673612853 25 24.458948002643208 25.10535775726955 26.05987522312597 24.37581901696127 26 24.050395991100583 25.457097654075778 26.275207581734904 24.217298773088732 27 24.26351879863699 25.74351393590514 25.928858301747642 24.06410896371023 28 24.11405169592932 25.5615913651088 26.05872316147726 24.265633777484624 29 24.024079120155044 25.83045160300781 26.30195432642996 23.843514950407187 30 24.28184001784148 25.607398711857517 26.069100313790646 24.04166095651036 31 24.239041787339392 25.099657631350937 26.366942639882208 24.294357941427467 32 23.722385125267788 25.60840461643139 26.301997313804915 24.367212944495904 33 23.814902553639218 25.155652985963243 26.356823411818535 24.672621048579003 34 24.16262742962494 24.930562493240235 26.723961386332522 24.1828486908023 35 23.915321061526797 24.977711046087453 26.679538233057258 24.427429659328492 36 23.732444171006527 24.639108091066518 27.0002670375732 24.628180700353752 37 23.540514139321395 24.190715380418496 27.483986772956676 24.784783707303433 38 23.347122536887895 24.136731834953927 27.861364340184203 24.65478128797397 39 23.01167485518843 24.07052268005305 28.38393606504918 24.533866399709336 40 23.163841565043082 23.91288797610452 28.511342046931553 24.411928411920847 41 22.605667696242953 24.08335871021368 28.659020874841225 24.651952718702137 42 22.259774082430184 24.37148588956612 28.56005534022702 24.808684687776676 43 22.105303249278112 24.11633862427676 28.541949057897288 25.23640906854784 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 6594.0 1 5667.0 2 4740.0 3 8297.5 4 11855.0 5 11855.0 6 13808.0 7 15761.0 8 14306.0 9 12851.0 10 17892.0 11 22933.0 12 22933.0 13 35545.0 14 48157.0 15 57741.0 16 67325.0 17 64543.5 18 61762.0 19 61762.0 20 73281.0 21 84800.0 22 80733.0 23 76666.0 24 92014.0 25 107362.0 26 107362.0 27 131474.0 28 155586.0 29 179790.5 30 203995.0 31 238781.5 32 273568.0 33 273568.0 34 315348.0 35 357128.0 36 406618.5 37 456109.0 38 510156.0 39 564203.0 40 564203.0 41 620165.5 42 676128.0 43 734703.5 44 793279.0 45 846774.0 46 900269.0 47 900269.0 48 946671.0 49 993073.0 50 1010947.5 51 1028822.0 52 1014612.0 53 1000402.0 54 1000402.0 55 955632.5 56 910863.0 57 845571.0 58 780279.0 59 710613.0 60 640947.0 61 640947.0 62 560035.0 63 479123.0 64 406123.0 65 333123.0 66 276402.0 67 219681.0 68 219681.0 69 178677.5 70 137674.0 71 110853.0 72 84032.0 73 68377.0 74 52722.0 75 52722.0 76 42346.5 77 31971.0 78 25321.0 79 18671.0 80 14255.5 81 9840.0 82 9840.0 83 7441.0 84 5042.0 85 3715.5 86 2389.0 87 1746.0 88 1103.0 89 1103.0 90 717.5 91 332.0 92 224.5 93 117.0 94 76.0 95 35.0 96 35.0 97 21.0 98 7.0 99 5.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1.1631322E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.304362901897164 #Duplication Level Percentage of deduplicated Percentage of total 1 77.11346490339811 38.020302582198504 2 11.238452884724396 11.082095189686493 3 4.065411505104718 6.0132757257969285 4 2.0853179260312746 4.112610871635101 5 1.223824636947414 3.016994701416892 6 0.8126781715110727 2.4041147694379297 7 0.5689173550766355 1.9635075415120145 8 0.4098891075039018 1.616745704472569 9 0.313684981646873 1.3919434354793137 >10 1.9449637890437441 18.070504139906387 >50 0.15392946169806904 5.215870221961021 >100 0.06787171595092169 5.523746305286005 >500 0.0012618378206453438 0.3966468707713935 >1k 2.0951065598030858E-4 0.21082965296000214 >5k 5.237695124106411E-5 0.14495079744184525 >10k+ 6.983593498808547E-5 0.8158614900374518 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 30335 0.26080440383302944 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 27288 0.23460789753735645 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 21474 0.18462217794331545 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15682 0.13482560279906272 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.597474990375128E-6 2 0.0 8.597474990375128E-6 0.0 0.0 8.597474990375128E-6 3 0.0 8.597474990375128E-6 0.0 0.0 8.597474990375128E-6 4 0.0 8.597474990375128E-6 0.0 0.0 1.7194949980750255E-5 5 0.0 8.597474990375128E-6 0.0 8.597474990375128E-6 1.7194949980750255E-5 6 1.7194949980750255E-5 8.597474990375128E-6 0.0 8.597474990375128E-6 5.158484994225076E-5 7 1.7194949980750255E-5 8.597474990375128E-6 0.0 8.597474990375128E-6 6.0182324932625884E-5 8 2.579242497112538E-5 8.597474990375128E-6 0.0 8.597474990375128E-6 7.737727491337614E-5 9 2.579242497112538E-5 8.597474990375128E-6 0.0 1.7194949980750255E-5 1.1176717487487665E-4 10 3.438989996150051E-5 8.597474990375128E-6 0.0 2.579242497112538E-5 1.1176717487487665E-4 11 3.438989996150051E-5 8.597474990375128E-6 0.0 3.438989996150051E-5 1.1176717487487665E-4 12 3.438989996150051E-5 8.597474990375128E-6 0.0 3.438989996150051E-5 1.1176717487487665E-4 13 3.438989996150051E-5 8.597474990375128E-6 0.0 3.438989996150051E-5 1.1176717487487665E-4 14 3.438989996150051E-5 8.597474990375128E-6 0.0 6.0182324932625884E-5 1.4615707483637714E-4 15 3.438989996150051E-5 8.597474990375128E-6 0.0 6.877979992300102E-5 2.235343497497533E-4 16 4.298737495187563E-5 8.597474990375128E-6 0.0 1.1176717487487665E-4 2.4932677472087867E-4 17 4.298737495187563E-5 8.597474990375128E-6 0.0 1.289621248556269E-4 2.579242497112538E-4 18 4.298737495187563E-5 8.597474990375128E-6 0.0 1.633520248171274E-4 3.0091162466312944E-4 19 5.158484994225076E-5 8.597474990375128E-6 0.0 2.235343497497533E-4 3.0091162466312944E-4 20 5.158484994225076E-5 1.7194949980750255E-5 0.0 3.267040496342548E-4 3.0091162466312944E-4 21 6.0182324932625884E-5 1.7194949980750255E-5 0.0 5.158484994225076E-4 3.0091162466312944E-4 22 6.0182324932625884E-5 1.7194949980750255E-5 0.0 9.027348739893883E-4 3.0091162466312944E-4 23 6.0182324932625884E-5 1.7194949980750255E-5 0.0 0.0013927909484407705 3.9548384955725584E-4 24 6.877979992300102E-5 1.7194949980750255E-5 0.0 0.002441682897266536 4.126787995380061E-4 25 9.45722248941264E-5 1.7194949980750255E-5 0.0 0.0036367319209286786 4.3847122450913146E-4 26 9.45722248941264E-5 1.7194949980750255E-5 0.0 0.007393828491722609 4.3847122450913146E-4 27 9.45722248941264E-5 1.7194949980750255E-5 0.0 0.03319485093783837 4.3847122450913146E-4 28 1.0316969988450152E-4 1.7194949980750255E-5 0.0 0.10126106043663824 4.3847122450913146E-4 29 1.0316969988450152E-4 1.7194949980750255E-5 0.0 0.18964310333769455 4.3847122450913146E-4 30 1.0316969988450152E-4 1.7194949980750255E-5 0.0 0.3001722418139572 4.3847122450913146E-4 31 1.0316969988450152E-4 1.7194949980750255E-5 0.0 0.6396693342338902 4.3847122450913146E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11055 0.0 20.616915 1 CTTATAC 9500 0.0 16.12421 37 GTATCAA 15510 0.0 14.635397 2 TCTTATA 14975 0.0 14.268782 37 CTCTTAT 22880 0.0 12.605551 37 GTATAGA 1420 0.0 11.725352 1 TCGTTAC 1035 0.0 11.26087 23 TATCAAC 21050 0.0 10.950594 3 CTCGTTA 1185 0.0 10.928269 22 AACGCAG 20735 0.0 10.876055 7 ATCAACG 20940 0.0 10.840258 4 TCAACGC 21235 0.0 10.654816 5 TCTCTTA 32165 0.0 10.6462 37 CAACGCA 21335 0.0 10.570189 6 GTACCGT 720 0.0 10.534722 6 TTAGACA 2045 0.0 10.403422 4 TATACAC 4000 0.0 10.36 37 GGGTAAG 3395 0.0 10.189985 1 TATACTG 2045 0.0 10.041565 5 GTATTAC 1080 0.0 9.935185 1 >>END_MODULE