##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727132.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10069145 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.485725451366527 31.0 31.0 34.0 30.0 34.0 2 31.728257960333277 31.0 31.0 34.0 30.0 34.0 3 31.826130421202595 31.0 31.0 34.0 30.0 34.0 4 35.55664239615181 37.0 35.0 37.0 33.0 37.0 5 35.09601113103446 37.0 35.0 37.0 32.0 37.0 6 35.109562728513694 37.0 35.0 37.0 32.0 37.0 7 35.072495926913355 37.0 35.0 37.0 32.0 37.0 8 35.02930884399817 37.0 35.0 37.0 32.0 37.0 9 36.77530316625692 39.0 37.0 39.0 33.0 39.0 10 36.53245881353382 38.0 35.0 39.0 32.0 39.0 11 36.6368480144044 38.0 35.0 39.0 32.0 39.0 12 36.5202305657531 38.0 35.0 39.0 32.0 39.0 13 36.61832578635028 38.0 35.0 39.0 32.0 39.0 14 37.67751591619745 39.0 37.0 40.0 33.0 41.0 15 37.6043964010847 39.0 37.0 40.0 32.0 41.0 16 37.55784974791802 39.0 37.0 40.0 32.0 41.0 17 37.49172129311873 39.0 36.0 40.0 32.0 41.0 18 37.48382111887355 39.0 36.0 40.0 32.0 41.0 19 37.52865402176649 39.0 37.0 40.0 32.0 41.0 20 37.431543889774154 39.0 36.0 40.0 32.0 41.0 21 37.3593845356284 39.0 36.0 40.0 32.0 41.0 22 37.28335335323903 39.0 36.0 40.0 32.0 41.0 23 37.215590996057756 39.0 36.0 40.0 31.0 41.0 24 37.112304570050384 39.0 36.0 40.0 31.0 41.0 25 37.072603383902006 39.0 36.0 40.0 31.0 41.0 26 36.87176766249766 39.0 36.0 40.0 31.0 41.0 27 36.7095179382162 39.0 36.0 40.0 30.0 41.0 28 36.609751374123626 39.0 35.0 40.0 30.0 41.0 29 36.49666669811588 38.0 35.0 40.0 30.0 41.0 30 36.4335714700702 38.0 35.0 40.0 30.0 41.0 31 36.39144366279361 38.0 35.0 40.0 30.0 41.0 32 36.273514782039584 38.0 35.0 40.0 30.0 41.0 33 36.184473557586074 38.0 35.0 40.0 30.0 41.0 34 36.141431273459666 38.0 35.0 40.0 30.0 41.0 35 36.05265452031925 38.0 35.0 40.0 29.0 41.0 36 35.91973300612912 38.0 35.0 40.0 29.0 41.0 37 35.828001384427374 38.0 35.0 40.0 28.0 41.0 38 35.78311326334063 38.0 35.0 40.0 28.0 41.0 39 35.67590475656076 38.0 34.0 40.0 27.0 41.0 40 35.57977385368867 38.0 34.0 40.0 27.0 41.0 41 35.52956621441046 38.0 34.0 40.0 27.0 41.0 42 35.38114050398519 38.0 34.0 40.0 27.0 41.0 43 34.071847411076114 37.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 12.0 10 18.0 11 12.0 12 12.0 13 18.0 14 30.0 15 44.0 16 140.0 17 309.0 18 658.0 19 1353.0 20 2867.0 21 5855.0 22 10826.0 23 18546.0 24 30439.0 25 47601.0 26 70417.0 27 101731.0 28 140861.0 29 189364.0 30 246966.0 31 317487.0 32 403483.0 33 512754.0 34 662430.0 35 879479.0 36 1215382.0 37 1751618.0 38 2401221.0 39 1057212.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.09033636917533 18.992933362266605 12.985849344706029 25.930880923852023 2 18.876270030871538 20.90875640384561 35.36215835604711 24.85281520923574 3 20.365562319342903 22.56022730827692 29.556859097768477 27.517351274611695 4 15.598424692463958 15.956180986568372 33.56632564135287 34.879068679614804 5 15.779740980986965 35.26420565003285 33.60021133869857 15.355842030281618 6 35.577608625161325 34.01485429001171 15.01891173480966 15.388625350017303 7 29.384639907360555 29.793890146581465 21.22585383366711 19.595616112390875 8 26.018296488927312 35.01949768326904 19.49751443642931 19.46469139137434 9 26.250034138946255 15.049083114802697 19.688831574081018 39.01205117217003 10 17.539572625083856 26.364214637886334 32.90495866332246 23.191254073707352 11 35.68680359653178 21.71615365554871 21.298322747363358 21.298720000556155 12 21.484127996964986 24.803784233914598 30.085046942913223 23.627040826207192 13 30.850782266021593 19.719757735140373 24.163551125741066 25.265908873096972 14 22.33761655036252 20.640153657534974 25.362729407511758 31.65950038459075 15 25.110642462691718 27.442627949046315 22.44119038905488 25.00553919920708 16 24.655062569860696 25.985205297967205 24.502437893187555 24.857294238984544 17 24.06758468569079 26.28612459151199 25.472778473246738 24.173512249550484 18 24.277900457288084 25.260347328397792 26.098839573767187 24.362912640546938 19 25.00396011776571 25.21545771761157 26.31539222049141 23.465189944131303 20 24.63260783313777 25.19153314407529 26.19679227978145 23.97906674300549 21 24.391455282449503 25.29352790132628 26.23415394256414 24.080862873660077 22 24.779293574578574 25.116343046008378 25.821368149927327 24.28299522948572 23 24.32329656589512 25.212915297177663 25.8041372926897 24.659650844237518 24 24.357192194570644 25.302426372844966 25.839323994241813 24.50105743834258 25 24.733410830810364 25.030933609556723 25.753626549225384 24.482029010407537 26 24.34713175746302 25.359114403457294 25.96951379685167 24.324240042228016 27 24.54331524672651 25.50148001642642 25.752325545018966 24.202879191828107 28 24.39716579709598 25.41734179019172 25.92057220349891 24.264920209213393 29 24.26613183145143 25.62741920987333 26.08291965206579 24.023529306609447 30 24.311945055910904 25.575994784065582 25.954795566058486 24.157264593965028 31 24.444915630870348 25.018996151113125 26.083267248609488 24.452820969407036 32 23.968380632119214 25.44024343675655 26.059700202946722 24.531675728177515 33 24.138156715391425 25.04334777183167 26.040920058257182 24.777575454519724 34 24.345999585863545 24.88002705294243 26.341730107173944 24.43224325402008 35 24.191428368545694 24.913316870498935 26.392300438617184 24.50295432233819 36 23.98332728349825 24.604194298522863 26.65939362279518 24.753084795183703 37 23.887688577332035 24.162945314622046 27.039157743780628 24.910208364265287 38 23.57355068379689 24.235861138160192 27.50377514674781 24.68681303129511 39 23.390486481225565 24.0999310269144 27.849196729215837 24.660385762644196 40 23.395670635391586 24.095551310463797 27.969028154823473 24.539749899321144 41 22.962754037209713 24.11196779865619 28.154098486018427 24.77117967811567 42 22.652191422409746 24.400403410617287 28.048260304127115 24.89914486284585 43 22.622079630395632 24.15999570966552 28.024971335699306 25.192953324239546 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 8186.0 1 6433.5 2 4681.0 3 7732.5 4 10784.0 5 10784.0 6 12784.5 7 14785.0 8 13393.5 9 12002.0 10 16325.0 11 20648.0 12 20648.0 13 34989.5 14 49331.0 15 60552.0 16 71773.0 17 65884.0 18 59995.0 19 59995.0 20 69840.0 21 79685.0 22 71055.5 23 62426.0 24 73696.0 25 84966.0 26 84966.0 27 103556.0 28 122146.0 29 140907.0 30 159668.0 31 185838.5 32 212009.0 33 212009.0 34 247026.5 35 282044.0 36 324198.0 37 366352.0 38 415531.5 39 464711.0 40 464711.0 41 513904.5 42 563098.0 43 616460.5 44 669823.0 45 715910.0 46 761997.0 47 761997.0 48 805829.5 49 849662.0 50 868398.0 51 887134.0 52 880363.0 53 873592.0 54 873592.0 55 838242.5 56 802893.0 57 751183.0 58 699473.0 59 638330.5 60 577188.0 61 577188.0 62 506293.0 63 435398.0 64 371142.5 65 306887.0 66 256473.0 67 206059.0 68 206059.0 69 169625.0 70 133191.0 71 110035.0 72 86879.0 73 70622.0 74 54365.0 75 54365.0 76 43825.5 77 33286.0 78 26586.0 79 19886.0 80 15287.5 81 10689.0 82 10689.0 83 8274.0 84 5859.0 85 4657.5 86 3456.0 87 2436.0 88 1416.0 89 1416.0 90 957.0 91 498.0 92 316.0 93 134.0 94 102.5 95 71.0 96 71.0 97 42.5 98 14.0 99 9.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1.0069145E7 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.55087943586181 #Duplication Level Percentage of deduplicated Percentage of total 1 79.43650156805437 41.74458016709473 2 10.29694528278527 10.822270602266295 3 3.639061105925132 5.737075843116168 4 1.8194402272782653 3.8245273609782844 5 1.0570472107711175 2.7774380265623497 6 0.719585074270413 2.268889708909809 7 0.48270585391506254 1.7756631992452623 8 0.3605653972466877 1.5158422975563444 9 0.27653699624408795 1.3079036114260594 >10 1.722903846982847 17.05312320899763 >50 0.13517328045456012 4.861420502643233 >100 0.052057949167503746 4.547034389484507 >500 0.0011359549769553504 0.38517595212075634 >1k 2.0793187178265316E-4 0.2584233795896065 >5k 5.670859540230913E-5 0.17494101469174247 >10k+ 7.561146053641218E-5 0.9456907353170504 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 31039 0.308258546281735 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 27798 0.27607110633524495 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 20669 0.20527065604875094 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15695 0.15587222152427044 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 9.931329819959887E-6 3.972531927983955E-5 2 0.0 9.931329819959887E-6 0.0 9.931329819959887E-6 4.965664909979944E-5 3 0.0 9.931329819959887E-6 0.0 9.931329819959887E-6 4.965664909979944E-5 4 0.0 9.931329819959887E-6 0.0 9.931329819959887E-6 7.94506385596791E-5 5 0.0 9.931329819959887E-6 0.0 9.931329819959887E-6 7.94506385596791E-5 6 9.931329819959887E-6 9.931329819959887E-6 0.0 9.931329819959887E-6 9.931329819959887E-5 7 9.931329819959887E-6 9.931329819959887E-6 0.0 9.931329819959887E-6 9.931329819959887E-5 8 9.931329819959887E-6 9.931329819959887E-6 0.0 9.931329819959887E-6 1.0924462801955876E-4 9 9.931329819959887E-6 9.931329819959887E-6 0.0 1.9862659639919775E-5 1.2910728765947854E-4 10 1.9862659639919775E-5 9.931329819959887E-6 0.0 2.9793989459879662E-5 1.2910728765947854E-4 11 2.9793989459879662E-5 9.931329819959887E-6 0.0 2.9793989459879662E-5 1.2910728765947854E-4 12 2.9793989459879662E-5 9.931329819959887E-6 0.0 3.972531927983955E-5 1.3903861747943842E-4 13 2.9793989459879662E-5 9.931329819959887E-6 0.0 4.965664909979944E-5 1.3903861747943842E-4 14 4.965664909979944E-5 9.931329819959887E-6 0.0 6.951930873971921E-5 2.1848925603911752E-4 15 4.965664909979944E-5 1.9862659639919775E-5 0.0 7.94506385596791E-5 2.5821457531895707E-4 16 5.9587978919759324E-5 1.9862659639919775E-5 0.0 1.3903861747943842E-4 2.979398945987966E-4 17 5.9587978919759324E-5 1.9862659639919775E-5 0.0 1.8869526657923786E-4 2.979398945987966E-4 18 5.9587978919759324E-5 1.9862659639919775E-5 0.0 2.6814590513891696E-4 3.3766521387863617E-4 19 5.9587978919759324E-5 1.9862659639919775E-5 0.0 3.6745920333851583E-4 3.3766521387863617E-4 20 5.9587978919759324E-5 1.9862659639919775E-5 0.0 4.866351611780345E-4 3.3766521387863617E-4 21 5.9587978919759324E-5 1.9862659639919775E-5 0.0 8.342317048766305E-4 3.6745920333851583E-4 22 5.9587978919759324E-5 1.9862659639919775E-5 0.0 0.001241416227494986 3.6745920333851583E-4 23 5.9587978919759324E-5 1.9862659639919775E-5 0.0 0.0017876393675927797 4.4690984189819493E-4 24 5.9587978919759324E-5 1.9862659639919775E-5 0.0 0.003098574903827485 4.568411717181548E-4 25 5.9587978919759324E-5 1.9862659639919775E-5 0.0 0.004886214271420265 4.667725015381147E-4 26 5.9587978919759324E-5 1.9862659639919775E-5 0.0 0.008630325613545143 4.667725015381147E-4 27 5.9587978919759324E-5 1.9862659639919775E-5 0.0 0.032455585851628915 4.866351611780345E-4 28 5.9587978919759324E-5 1.9862659639919775E-5 0.0 0.09685032840424883 4.965664909979944E-4 29 5.9587978919759324E-5 1.9862659639919775E-5 0.0 0.1825974300697825 4.965664909979944E-4 30 5.9587978919759324E-5 1.9862659639919775E-5 0.0 0.29186192074898115 5.064978208179543E-4 31 5.9587978919759324E-5 1.9862659639919775E-5 0.0 0.5978064671826655 5.064978208179543E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 13690 0.0 16.418919 1 CTTATAC 7135 0.0 15.97197 37 TCTTATA 11435 0.0 14.010493 37 CGTATAC 260 1.8189894E-12 13.519231 3 CTCTTAT 17640 0.0 12.836735 37 GTATTAG 1200 0.0 12.025 1 GTATCAA 18805 0.0 11.943101 2 GTCTTAG 1435 0.0 11.602787 1 TCTCTTA 24890 0.0 10.82945 37 TATACCG 480 0.0 10.791667 5 AACGCAG 21200 0.0 10.340802 7 GTATTAT 1090 0.0 10.183486 1 GTACTAG 820 0.0 10.15244 1 TAGTACT 830 0.0 10.030121 4 ACCGTCC 980 0.0 10.005102 8 TAGGACT 1390 0.0 9.982015 4 CGTACAC 600 0.0 9.866666 3 CTAGAGT 1820 0.0 9.758243 4 GTACCGT 515 0.0 9.69903 6 CTAGACA 1300 0.0 9.676924 4 >>END_MODULE