##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727131.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1908493 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.779754497396638 31.0 30.0 31.0 26.0 34.0 2 30.032700146136246 31.0 30.0 31.0 26.0 34.0 3 30.0875549451845 31.0 30.0 31.0 26.0 34.0 4 33.701409436660235 35.0 33.0 37.0 28.0 37.0 5 31.990965122743443 35.0 30.0 37.0 22.0 37.0 6 32.22176450214908 35.0 32.0 36.0 25.0 37.0 7 32.236775298625666 35.0 32.0 35.0 25.0 37.0 8 32.14364003430979 35.0 32.0 35.0 25.0 37.0 9 33.46375229041972 35.0 32.0 38.0 25.0 39.0 10 32.917043971342835 35.0 31.0 38.0 23.0 39.0 11 33.29824578869297 35.0 32.0 38.0 25.0 39.0 12 33.00325544814678 35.0 31.0 38.0 25.0 39.0 13 33.28459365583211 35.0 32.0 38.0 25.0 39.0 14 33.80987459739176 36.0 32.0 39.0 25.0 40.0 15 33.783965673439724 36.0 32.0 39.0 25.0 40.0 16 33.665924370694576 36.0 31.0 39.0 25.0 40.0 17 33.57676030250045 36.0 31.0 39.0 24.0 40.0 18 33.5218730170873 36.0 31.0 39.0 24.0 40.0 19 33.561923465268144 36.0 31.0 39.0 24.0 40.0 20 33.40312225405071 36.0 31.0 39.0 24.0 40.0 21 33.279233405624225 36.0 31.0 39.0 23.0 40.0 22 33.17940857000785 36.0 31.0 39.0 23.0 40.0 23 33.044495316461735 36.0 30.0 39.0 22.0 40.0 24 32.86377209662283 36.0 30.0 39.0 21.0 40.0 25 32.79748262110471 36.0 30.0 38.0 21.0 40.0 26 32.43878442310242 35.0 30.0 38.0 18.0 40.0 27 32.18803160399331 35.0 30.0 38.0 18.0 40.0 28 32.002205928971186 35.0 29.0 38.0 18.0 40.0 29 31.80748789751914 35.0 29.0 38.0 17.0 40.0 30 31.67082038026862 35.0 28.0 38.0 17.0 40.0 31 31.56777991850114 34.0 28.0 38.0 16.0 40.0 32 31.37967129038461 34.0 27.0 38.0 16.0 40.0 33 31.23159843918736 34.0 27.0 38.0 16.0 40.0 34 31.1282959906062 34.0 27.0 38.0 16.0 40.0 35 30.973006450639325 34.0 27.0 38.0 15.0 40.0 36 30.734367901794766 34.0 26.0 38.0 15.0 40.0 37 30.59814733404838 34.0 26.0 38.0 15.0 40.0 38 30.483278691616892 34.0 26.0 38.0 15.0 40.0 39 30.315862306018413 33.0 25.0 38.0 14.0 40.0 40 30.16726338529929 33.0 25.0 38.0 13.0 40.0 41 30.040141095618374 33.0 25.0 38.0 13.0 40.0 42 29.784600205502457 33.0 25.0 38.0 12.0 40.0 43 28.525940624356494 32.0 23.0 37.0 9.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 15.0 11 38.0 12 64.0 13 181.0 14 388.0 15 803.0 16 1605.0 17 2952.0 18 5050.0 19 8317.0 20 12645.0 21 18883.0 22 26330.0 23 36143.0 24 47686.0 25 59950.0 26 74493.0 27 88428.0 28 102411.0 29 117274.0 30 129409.0 31 140779.0 32 147676.0 33 153039.0 34 153127.0 35 149396.0 36 140374.0 37 130208.0 38 115260.0 39 45566.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.66302208077263 22.12756347547515 14.35368115052033 23.855733293231886 2 20.889570986113128 23.77404580472656 32.72644961233811 22.609933596822206 3 22.42512809845255 24.32091707960155 28.974012480003857 24.279942341942046 4 18.567267472293583 17.604151547844292 32.144314912341834 31.68426606752029 5 15.813000100078964 36.829477498738534 32.33415055753414 15.023371843648365 6 34.862008925366766 35.32080023348264 14.39512746444446 15.422063376706124 7 28.85035470394704 30.808548944114545 21.0553038444469 19.285792507491514 8 26.23604068760011 35.89580889214684 19.00017448321791 18.867975937035137 9 26.548328969506308 15.307103562863475 19.54536904248535 38.59919842514486 10 17.742952161731797 27.679221249436075 32.33168788148555 22.24613870734658 11 35.82313375003209 22.30021278569007 20.933741962899525 20.942911501378312 12 21.391223336947004 25.849976918961715 29.782398992293917 22.97640075179736 13 31.28761803160923 20.25629646008657 24.198883621789548 24.257201886514647 14 22.29560181776931 21.486691331851883 25.733287992148778 30.48441885823003 15 25.361790690350972 28.167669464860495 22.47108058557197 23.999459259216565 16 24.368965461230406 26.598787629821015 24.84190405728499 24.19034285166359 17 24.076692971889337 26.96892260018769 25.508974882276224 23.445409545646747 18 24.18945209649708 25.714529736289315 26.349952554188043 23.746065613025564 19 25.13286661255766 25.66297073135715 26.68760115965843 22.516561496426764 20 24.591759047583615 25.593387033643822 26.61089142061302 23.20396249815954 21 24.273811850501943 25.765197986054964 26.667742559181512 23.293247604261584 22 24.66385781870827 25.657783392446294 26.24327152365767 23.435087265187768 23 24.244050148467927 25.69755299076287 26.23462595880624 23.823770901962963 24 24.30839410990766 25.7941213302852 26.1567110804179 23.740773479389237 25 24.658722877160148 25.50294918556159 26.21041837722224 23.627909560056022 26 24.294351616694428 25.8315854446414 26.333447384926224 23.540615553737947 27 24.567027492372254 25.943768198259043 26.13271308828484 23.35649122108386 28 24.447299518520634 25.901588321256614 26.237507813756718 23.413604346466034 29 24.283557759970826 26.122443205188596 26.398315319993316 23.195683714847267 30 24.342871574587907 26.025927263028997 26.234311574629825 23.396889587753268 31 24.425973791887106 25.502530006659708 26.492211394016117 23.579284807437073 32 23.992280820521742 25.92202329272363 26.296297654746443 23.789398232008185 33 24.192229156722085 25.612774057856118 26.26957499975111 23.925421785670682 34 24.470616344938126 25.50687898776679 26.478273695528358 23.54423097176673 35 24.310332812328888 25.553879422140923 26.434155116104698 23.701632649425488 36 24.14727221949465 25.316833753123536 26.55540261347566 23.980491413906154 37 24.103048845345516 25.057571602306112 26.938584527163577 23.90079502518479 38 23.896079262538557 25.03210648401645 27.147911991293654 23.92390226215134 39 23.701370662611808 25.053379813287236 27.389568628231803 23.85568089586915 40 23.851489106850273 24.931870329102594 27.475971879383366 23.740668684663763 41 23.557015928274296 24.98369132084844 27.454698550112578 24.004594200764686 42 23.360159036475377 25.144132045545888 27.332507900212367 24.163201017766372 43 23.667102787382504 24.861972247212854 27.038296708450073 24.432628256954573 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2436.0 1 1924.0 2 1412.0 3 1835.0 4 2258.0 5 2258.0 6 2822.5 7 3387.0 8 3291.0 9 3195.0 10 4192.5 11 5190.0 12 5190.0 13 9015.0 14 12840.0 15 16576.0 16 20312.0 17 18122.5 18 15933.0 19 15933.0 20 17992.0 21 20051.0 22 17350.5 23 14650.0 24 16283.5 25 17917.0 26 17917.0 27 21152.5 28 24388.0 29 28155.5 30 31923.0 31 37137.0 32 42351.0 33 42351.0 34 48524.5 35 54698.0 36 62803.5 37 70909.0 38 79624.5 39 88340.0 40 88340.0 41 97457.5 42 106575.0 43 116334.0 44 126093.0 45 134577.5 46 143062.0 47 143062.0 48 150883.0 49 158704.0 50 162747.5 51 166791.0 52 164528.0 53 162265.0 54 162265.0 55 154355.5 56 146446.0 57 136512.5 58 126579.0 59 115341.5 60 104104.0 61 104104.0 62 91674.0 63 79244.0 64 67329.5 65 55415.0 66 46530.5 67 37646.0 68 37646.0 69 31194.0 70 24742.0 71 20293.5 72 15845.0 73 12834.5 74 9824.0 75 9824.0 76 7789.5 77 5755.0 78 4585.5 79 3416.0 80 2629.5 81 1843.0 82 1843.0 83 1439.5 84 1036.0 85 788.5 86 541.0 87 391.0 88 241.0 89 241.0 90 170.0 91 99.0 92 60.5 93 22.0 94 16.5 95 11.0 96 11.0 97 7.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1908493.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 74.17048262577845 #Duplication Level Percentage of deduplicated Percentage of total 1 88.39859604849165 65.56566532357857 2 6.4483608184397605 9.565560680976736 3 2.0543659952093765 4.571199520640013 4 0.9772772328537703 2.899404960797976 5 0.5642575075492676 2.0925625830073997 6 0.36631853014365084 1.630201330531221 7 0.23962445692640716 1.2441143133420174 8 0.1770430390740078 1.0505094122922967 9 0.1482965181291961 0.9899301889228477 >10 0.6052253676926614 7.3347400144550186 >50 0.01564102218883323 0.777656744986701 >100 0.004137948699271317 0.5245882753740434 >500 2.1387865054426313E-4 0.11828870292148674 >1k 4.990501846032751E-4 0.8163348215028599 >5k 1.4258576702950716E-4 0.8192431266707998 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7852 0.4114240922025913 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7641 0.40036824866530824 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4654 0.24385732617305905 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4048 0.21210452435508018 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 5.239736273593877E-5 0.0 12 0.0 0.0 0.0 5.239736273593877E-5 0.0 13 0.0 0.0 0.0 5.239736273593877E-5 5.239736273593877E-5 14 0.0 0.0 5.239736273593877E-5 1.0479472547187755E-4 1.0479472547187755E-4 15 0.0 5.239736273593877E-5 5.239736273593877E-5 1.0479472547187755E-4 1.0479472547187755E-4 16 0.0 5.239736273593877E-5 5.239736273593877E-5 1.5719208820781633E-4 1.0479472547187755E-4 17 0.0 5.239736273593877E-5 5.239736273593877E-5 2.6198681367969385E-4 1.0479472547187755E-4 18 0.0 5.239736273593877E-5 5.239736273593877E-5 2.6198681367969385E-4 1.0479472547187755E-4 19 0.0 5.239736273593877E-5 5.239736273593877E-5 4.191789018875102E-4 1.0479472547187755E-4 20 0.0 5.239736273593877E-5 5.239736273593877E-5 4.71576264623449E-4 1.0479472547187755E-4 21 0.0 5.239736273593877E-5 5.239736273593877E-5 8.907551665109591E-4 1.0479472547187755E-4 22 5.239736273593877E-5 5.239736273593877E-5 5.239736273593877E-5 0.0013623314311344082 1.0479472547187755E-4 23 5.239736273593877E-5 5.239736273593877E-5 5.239736273593877E-5 0.0016767156075500407 1.5719208820781633E-4 24 5.239736273593877E-5 5.239736273593877E-5 5.239736273593877E-5 0.0022530865976453673 1.5719208820781633E-4 25 5.239736273593877E-5 5.239736273593877E-5 5.239736273593877E-5 0.003248636489628204 1.5719208820781633E-4 26 5.239736273593877E-5 5.239736273593877E-5 5.239736273593877E-5 0.005501723087273571 1.5719208820781633E-4 27 5.239736273593877E-5 5.239736273593877E-5 5.239736273593877E-5 0.017238732340123856 1.5719208820781633E-4 28 5.239736273593877E-5 5.239736273593877E-5 5.239736273593877E-5 0.05653675439207794 1.5719208820781633E-4 29 5.239736273593877E-5 5.239736273593877E-5 5.239736273593877E-5 0.11417385340161058 1.5719208820781633E-4 30 5.239736273593877E-5 5.239736273593877E-5 5.239736273593877E-5 0.18805413485928427 1.5719208820781633E-4 31 5.239736273593877E-5 5.239736273593877E-5 5.239736273593877E-5 0.39056994183368765 2.6198681367969385E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGT 55 5.144805E-4 20.181818 4 GGTATCA 3765 0.0 15.92032 1 CTTATAC 865 0.0 14.971098 37 TCTATTC 165 1.646913E-8 14.575757 3 TCTTATA 1450 0.0 14.162069 37 ATACCGT 80 0.0063006305 13.875001 6 CTATACT 195 1.0270014E-8 13.282052 4 TCGAACG 85 0.009407707 13.058823 3 CAATACG 100 0.0018332514 12.950001 4 ATTATAC 260 2.3646862E-11 12.807693 3 GTCTTAT 175 5.309503E-7 12.685715 1 CTCTTAT 2230 0.0 12.609865 37 GGGTTAT 195 1.4686884E-7 12.333334 1 CATATAG 105 0.0026446725 12.333333 1 GTATAAC 210 2.8936483E-8 12.333333 3 GTATCAA 4950 0.0 12.109091 2 ACCGTGC 200 2.041561E-7 12.025001 8 GTAATAC 185 1.0401745E-6 12.0 3 GACCCGT 110 0.0037466025 11.772727 6 CGTGCGC 195 1.9617528E-6 11.384616 10 >>END_MODULE