##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727130.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2148934 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.534585520076465 31.0 31.0 34.0 30.0 34.0 2 31.787143299887294 31.0 31.0 34.0 30.0 34.0 3 31.899064373312534 31.0 31.0 34.0 30.0 34.0 4 35.63935793281692 37.0 35.0 37.0 33.0 37.0 5 35.22276998735187 37.0 35.0 37.0 32.0 37.0 6 35.236758783657386 37.0 35.0 37.0 32.0 37.0 7 35.18932456743669 37.0 35.0 37.0 32.0 37.0 8 35.14258278755886 37.0 35.0 37.0 32.0 37.0 9 36.96880360215809 39.0 37.0 39.0 33.0 39.0 10 36.72854354763804 39.0 35.0 39.0 32.0 39.0 11 36.85457161550797 39.0 37.0 39.0 33.0 39.0 12 36.722805819071226 39.0 35.0 39.0 32.0 39.0 13 36.86313353504575 39.0 37.0 39.0 33.0 39.0 14 37.869906660697815 39.0 37.0 41.0 33.0 41.0 15 37.874306051279376 39.0 37.0 41.0 33.0 41.0 16 37.809778243538425 39.0 37.0 41.0 33.0 41.0 17 37.73073672807075 39.0 37.0 41.0 33.0 41.0 18 37.75332374098041 39.0 37.0 41.0 33.0 41.0 19 37.80324337555272 39.0 37.0 41.0 33.0 41.0 20 37.676707614100756 39.0 37.0 41.0 32.0 41.0 21 37.66359087808188 39.0 37.0 40.0 32.0 41.0 22 37.5655227196368 39.0 37.0 40.0 32.0 41.0 23 37.50442219258479 39.0 36.0 40.0 32.0 41.0 24 37.390370295225445 39.0 36.0 40.0 32.0 41.0 25 37.36506705184989 39.0 36.0 40.0 32.0 41.0 26 37.210813826762475 39.0 36.0 40.0 31.0 41.0 27 37.01857572172994 39.0 36.0 40.0 31.0 41.0 28 36.90230784193465 39.0 36.0 40.0 31.0 41.0 29 36.81039575901354 39.0 36.0 40.0 30.0 41.0 30 36.74781403244585 39.0 35.0 40.0 30.0 41.0 31 36.69696277317033 39.0 35.0 40.0 30.0 41.0 32 36.58281920245108 38.0 35.0 40.0 30.0 41.0 33 36.54242801314512 38.0 35.0 40.0 30.0 41.0 34 36.515958144829014 38.0 35.0 40.0 30.0 41.0 35 36.412282554978425 38.0 35.0 40.0 30.0 41.0 36 36.31821638077298 38.0 35.0 40.0 30.0 41.0 37 36.16970507237542 38.0 35.0 40.0 30.0 41.0 38 36.10348619361972 38.0 35.0 40.0 29.0 41.0 39 35.985768757905085 38.0 35.0 40.0 29.0 41.0 40 35.90773658009041 38.0 35.0 40.0 29.0 41.0 41 35.834651506281716 38.0 35.0 40.0 28.0 41.0 42 35.763446434371645 38.0 35.0 40.0 28.0 41.0 43 34.41439011156229 37.0 33.0 40.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 5.0 11 8.0 12 5.0 13 3.0 14 2.0 15 5.0 16 6.0 17 32.0 18 79.0 19 138.0 20 328.0 21 730.0 22 1333.0 23 2546.0 24 4455.0 25 7338.0 26 11588.0 27 17450.0 28 24994.0 29 35127.0 30 48126.0 31 63130.0 32 82670.0 33 106730.0 34 139443.0 35 184413.0 36 250678.0 37 351020.0 38 503493.0 39 313058.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.64900643761046 18.5983841290612 12.891508068651714 25.861101364676625 2 18.66883766555883 21.00031922804516 35.42007339452957 24.910769711866443 3 20.15087480583396 22.64234266850448 30.039638257852495 27.167144267809064 4 15.209494568004414 15.684427720907204 33.70280334342516 35.40327436766322 5 15.699737637358801 35.42858924471389 33.496515016282494 15.375158101644814 6 35.296477230105715 33.82114108669694 15.10809545570036 15.774286227496981 7 29.089260070341854 30.309306847022754 21.25947097491128 19.341962107724108 8 26.499464385597697 34.59022008121236 19.60632574104184 19.30398979214811 9 26.828232044353157 14.743403008189176 19.68329413560398 38.745070811853694 10 17.498396879569125 26.4524643381323 32.65795971397912 23.391179068319456 11 35.49480812346959 21.86353792159275 21.304470030256862 21.337183924680794 12 21.688520913159735 24.976569778317995 29.92967676066366 23.405232547858613 13 31.028593712045133 19.78525166431356 24.353284000346218 24.832870623295083 14 22.246378902283645 20.88365673398997 25.956590570022158 30.91337379370423 15 25.391147424723144 27.353981090159117 22.880786473665548 24.37408501145219 16 24.17128678684408 26.172092767856064 25.05605104670502 24.60056939859484 17 24.04289754827277 26.13458579928467 25.59552782914692 24.226988823295642 18 24.02386485578431 25.10407485758055 26.5825288259202 24.28953146071494 19 24.984387607995405 25.090347120944617 26.97946982085071 22.945795450209268 20 24.35919390730474 24.900299404262764 26.819250847164223 23.921255841268273 21 23.929725156752138 25.479377216796795 27.23480572227905 23.356091904172022 22 24.58656245375614 25.031015377857113 26.21876707241823 24.16365509596851 23 23.898267699240648 25.19281653135927 26.698121021864797 24.21079474753529 24 23.821997325185418 25.271553244538918 26.635578384445495 24.270871045830162 25 24.225453178180437 25.003699508686633 26.49374061744102 24.27710669569191 26 23.749728935369816 25.323113692649475 26.78588546693384 24.141271905046874 27 24.26528688177487 25.747556695552305 26.329985006519514 23.65717141615331 28 23.915252864908833 25.716657654446344 26.284101791865176 24.083987688779647 29 23.76057152057718 25.90279645628949 26.68727843665743 23.6493535864759 30 24.114281778779617 25.68682891145098 26.426730648777486 23.772158660991916 31 23.9936173004848 25.0503738132488 26.78481516882324 24.17119371744316 32 23.397228579379355 25.786878517441668 26.539530762694437 24.27636214048454 33 23.6187337535727 25.104447135184238 26.73874581536706 24.538073295876 34 23.939637047950285 25.15442540347912 27.11372243168008 23.792215116890514 35 23.789329965461945 25.229346271220987 26.88761032214112 24.09371344117595 36 23.45320982403368 24.86763204453929 27.30781866730202 24.371339464125004 37 23.29024530302001 24.63672686085287 27.55049713020502 24.5225307059221 38 23.240871985831113 24.413406833341554 27.90104302877613 24.444678152051203 39 22.851562681776176 24.431834574724025 28.449919820711106 24.266682922788693 40 23.226073951084583 24.212842274355566 28.480539653614308 24.08054412094555 41 22.56756140486399 24.3982830556918 28.617444742369933 24.41671079707427 42 22.18113725223762 24.65920312117543 28.55145853711654 24.60820108947041 43 21.957817224726305 24.27836313260435 28.47667727347606 25.287142369193283 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1223.0 1 1072.5 2 922.0 3 1818.0 4 2714.0 5 2714.0 6 3296.0 7 3878.0 8 3664.0 9 3450.0 10 5003.0 11 6556.0 12 6556.0 13 10331.0 14 14106.0 15 18280.0 16 22454.0 17 20426.0 18 18398.0 19 18398.0 20 20426.5 21 22455.0 22 18996.5 23 15538.0 24 18064.5 25 20591.0 26 20591.0 27 24371.5 28 28152.0 29 32035.5 30 35919.0 31 40820.5 32 45722.0 33 45722.0 34 52465.0 35 59208.0 36 66964.5 37 74721.0 38 84351.5 39 93982.0 40 93982.0 41 104444.5 42 114907.0 43 126411.5 44 137916.0 45 149344.5 46 160773.0 47 160773.0 48 171794.5 49 182816.0 50 187260.0 51 191704.0 52 189656.5 53 187609.0 54 187609.0 55 177667.0 56 167725.0 57 157436.5 58 147148.0 59 134029.5 60 120911.0 61 120911.0 62 105936.5 63 90962.0 64 77005.0 65 63048.0 66 52160.0 67 41272.0 68 41272.0 69 33773.0 70 26274.0 71 21676.5 72 17079.0 73 14061.0 74 11043.0 75 11043.0 76 9016.0 77 6989.0 78 5822.0 79 4655.0 80 3733.0 81 2811.0 82 2811.0 83 2283.5 84 1756.0 85 1374.5 86 993.0 87 710.0 88 427.0 89 427.0 90 261.5 91 96.0 92 61.0 93 26.0 94 15.0 95 4.0 96 4.0 97 2.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2148934.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.84736487748216 #Duplication Level Percentage of deduplicated Percentage of total 1 84.24469260513922 53.78801627751646 2 8.382875286908734 10.704489943313796 3 2.722937655932708 5.215571821709148 4 1.3244209049604307 3.3824313908149497 5 0.7992074091334898 2.551364353186654 6 0.5265183933760563 2.017008718595205 7 0.3576121973919517 1.5982817516065482 8 0.2813171399137553 1.4369086462690586 9 0.21010208691994076 1.2073018144588137 >10 1.0805990285908869 12.04333178610122 >50 0.050014037112251795 2.1565623758915122 >100 0.01882850537040043 2.0840574178948343 >500 2.186873125416374E-4 0.08382219385632446 >1k 4.3737462508327E-4 0.5075873660172486 >5k 2.18687312541635E-4 1.2232641427683246 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 9618 0.44757074903184557 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 9493 0.44175391147424725 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7172 0.3337468717047615 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4426 0.2059625842394415 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.65347004607866E-5 2 0.0 0.0 0.0 0.0 4.65347004607866E-5 3 0.0 0.0 0.0 0.0 4.65347004607866E-5 4 0.0 0.0 0.0 0.0 4.65347004607866E-5 5 0.0 0.0 0.0 4.65347004607866E-5 4.65347004607866E-5 6 0.0 0.0 0.0 4.65347004607866E-5 4.65347004607866E-5 7 0.0 0.0 0.0 4.65347004607866E-5 9.30694009215732E-5 8 0.0 0.0 0.0 4.65347004607866E-5 9.30694009215732E-5 9 0.0 0.0 0.0 4.65347004607866E-5 1.3960410138235982E-4 10 4.65347004607866E-5 0.0 0.0 4.65347004607866E-5 1.3960410138235982E-4 11 4.65347004607866E-5 0.0 0.0 9.30694009215732E-5 1.3960410138235982E-4 12 4.65347004607866E-5 0.0 0.0 9.30694009215732E-5 1.3960410138235982E-4 13 4.65347004607866E-5 0.0 0.0 1.3960410138235982E-4 1.3960410138235982E-4 14 4.65347004607866E-5 0.0 0.0 1.3960410138235982E-4 1.3960410138235982E-4 15 4.65347004607866E-5 0.0 0.0 2.7920820276471965E-4 2.32673502303933E-4 16 4.65347004607866E-5 0.0 0.0 4.65347004607866E-4 2.32673502303933E-4 17 9.30694009215732E-5 0.0 0.0 6.98020506911799E-4 2.32673502303933E-4 18 9.30694009215732E-5 0.0 0.0 7.445552073725856E-4 2.32673502303933E-4 19 1.3960410138235982E-4 0.0 0.0 9.30694009215732E-4 2.32673502303933E-4 20 1.861388018431464E-4 0.0 0.0 0.0011168328110588786 2.32673502303933E-4 21 1.861388018431464E-4 0.0 0.0 0.0018148533179706775 3.2574290322550623E-4 22 2.32673502303933E-4 0.0 0.0 0.0023267350230393303 3.2574290322550623E-4 23 2.32673502303933E-4 0.0 0.0 0.003071290230411916 4.1881230414707944E-4 24 2.32673502303933E-4 0.0 0.0 0.0039089148387060745 4.1881230414707944E-4 25 2.32673502303933E-4 0.0 0.0 0.005258421152068886 4.65347004607866E-4 26 2.32673502303933E-4 0.0 0.0 0.007724760276490576 4.65347004607866E-4 27 2.32673502303933E-4 0.0 0.0 0.027502007972324882 4.65347004607866E-4 28 2.32673502303933E-4 0.0 0.0 0.08427434253448454 4.65347004607866E-4 29 2.32673502303933E-4 0.0 0.0 0.18283483811043055 4.65347004607866E-4 30 2.32673502303933E-4 0.0 0.0 0.2947042580181616 4.65347004607866E-4 31 2.32673502303933E-4 0.0 0.0 0.6203540918427463 4.65347004607866E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1530 0.0 16.32353 37 CGTAACC 70 0.0025934775 15.857143 3 GGTATCA 4775 0.0 15.381151 1 TATACCG 115 2.2115026E-5 14.478261 5 TACCGTC 90 8.2781457E-4 14.388888 7 TCTTATA 2495 0.0 13.643287 37 AATAGCG 100 0.001833382 12.950001 5 TATACTG 360 0.0 12.847222 5 CGGTCGT 245 1.1459633E-10 12.836736 17 GTCGTGT 160 2.6979033E-6 12.71875 1 CTCTTAT 3805 0.0 12.34954 37 ACTATAC 180 7.4703894E-7 12.333333 3 TGGACCG 210 2.894376E-8 12.333333 5 ATAGCGT 120 5.124664E-4 12.333333 6 GTATTAC 215 4.0168743E-8 12.046512 1 TACTAAG 170 5.3139993E-6 11.970588 2 GTGCTAT 155 2.7222655E-5 11.935483 1 GTCTAGA 280 8.367351E-11 11.892858 1 GATAGTA 140 1.3993902E-4 11.892858 2 TACCGGC 140 1.3993902E-4 11.892858 7 >>END_MODULE