SRR2727128.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2727128.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3280656
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	27481	0.8376678322872011	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	24667	0.751892304465936	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	19988	0.6092683902243942	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13369	0.40750996142234974	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4529	0.1380516579610907	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3726	0.11357484600640846	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3641	0.11098390078081945	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3383	0.10311961997844334	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3334	0.10162601626016261	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCCGTT	500	0.0	15.170001	7
CTTATAC	3440	0.0	15.058139	37
TACCCGT	465	0.0	14.32258	6
TACTTAC	745	0.0	13.657718	31
GGTATCA	15125	0.0	13.50347	1
ATACCCG	480	0.0	13.489584	5
TCTTATA	5280	0.0	13.244318	37
TATACAC	1525	0.0	13.10164	37
GTACTAG	240	1.1295924E-9	12.333334	1
GGACCGT	225	5.7170837E-9	12.333333	6
TATACGT	105	0.0026453712	12.333333	4
TCTATAC	365	0.0	12.164384	3
TAATACT	460	0.0	12.065218	4
TATACCG	185	1.0409312E-6	12.0	5
GTACTTA	910	0.0	11.994505	30
CTCGTTA	435	0.0	11.908045	22
GCACCGT	420	0.0	11.892857	6
TCGTTAC	375	0.0	11.840001	23
CCGTTTT	565	0.0	11.787611	9
CCCGTTT	600	0.0	11.716667	8