##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727128.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3280656 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.588172609380564 31.0 31.0 34.0 30.0 34.0 2 31.8225275676572 31.0 31.0 34.0 30.0 34.0 3 31.91737384230471 31.0 31.0 34.0 30.0 34.0 4 35.659025511970775 37.0 35.0 37.0 33.0 37.0 5 35.27131250579153 37.0 35.0 37.0 33.0 37.0 6 35.29964159607103 37.0 35.0 37.0 32.0 37.0 7 35.24417067805951 37.0 35.0 37.0 32.0 37.0 8 35.205574738710794 37.0 35.0 37.0 32.0 37.0 9 37.02278964938719 39.0 37.0 39.0 33.0 39.0 10 36.79431522232139 39.0 37.0 39.0 32.0 39.0 11 36.9132777103116 39.0 37.0 39.0 33.0 39.0 12 36.790788488643734 39.0 37.0 39.0 32.0 39.0 13 36.93921977799562 39.0 37.0 39.0 33.0 39.0 14 37.92200401383138 39.0 37.0 41.0 33.0 41.0 15 37.928791375871164 39.0 37.0 41.0 33.0 41.0 16 37.87145741583391 39.0 37.0 41.0 33.0 41.0 17 37.81973849132613 39.0 37.0 41.0 33.0 41.0 18 37.86107961334562 39.0 37.0 41.0 33.0 41.0 19 37.90536923103184 40.0 37.0 41.0 33.0 41.0 20 37.78328267273375 39.0 37.0 41.0 33.0 41.0 21 37.76442760228442 39.0 37.0 41.0 32.0 41.0 22 37.66130249559844 39.0 37.0 41.0 32.0 41.0 23 37.58296694319672 39.0 37.0 40.0 32.0 41.0 24 37.47591548763418 39.0 36.0 40.0 32.0 41.0 25 37.441391294911746 39.0 36.0 40.0 32.0 41.0 26 37.2684975200082 39.0 36.0 40.0 32.0 41.0 27 37.05919517316049 39.0 36.0 40.0 31.0 41.0 28 36.926077589360176 39.0 36.0 40.0 31.0 41.0 29 36.81134687696607 39.0 35.0 40.0 31.0 41.0 30 36.71770310572032 39.0 35.0 40.0 30.0 41.0 31 36.62480491706537 39.0 35.0 40.0 30.0 41.0 32 36.483170134265826 38.0 35.0 40.0 30.0 41.0 33 36.41194017294102 38.0 35.0 40.0 30.0 41.0 34 36.367771872454774 38.0 35.0 40.0 30.0 41.0 35 36.22878716939539 38.0 35.0 40.0 30.0 41.0 36 36.11565674669944 38.0 35.0 40.0 30.0 41.0 37 35.93959622709605 38.0 35.0 40.0 29.0 41.0 38 35.84137288395979 38.0 35.0 40.0 29.0 41.0 39 35.68278265078692 38.0 35.0 40.0 27.0 41.0 40 35.55724647753376 38.0 34.0 40.0 27.0 41.0 41 35.4480085690179 38.0 34.0 40.0 27.0 41.0 42 35.31936509039655 38.0 34.0 40.0 26.0 41.0 43 34.00205934422871 37.0 33.0 40.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 10.0 11 15.0 12 16.0 13 20.0 14 8.0 15 18.0 16 21.0 17 41.0 18 108.0 19 225.0 20 642.0 21 1130.0 22 2298.0 23 4282.0 24 7252.0 25 11939.0 26 18656.0 27 27898.0 28 40873.0 29 56483.0 30 75279.0 31 97964.0 32 126252.0 33 163474.0 34 212047.0 35 279255.0 36 382257.0 37 532889.0 38 748242.0 39 491060.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.49614833130935 18.327432074560697 13.272010232099921 24.904409362030034 2 18.422626450319694 21.801188542779247 35.4000846172229 24.37610038967816 3 20.50656941782375 23.17716334781824 30.365634190235124 25.950633044122885 4 15.108167390912062 15.937483235060304 33.52460605439887 35.429743319628756 5 15.424445598685141 35.76918762588945 33.36796055423062 15.438406221194786 6 34.60134192673661 33.91486336878965 15.048606132432049 16.43518857204169 7 28.146139064869953 30.80326007969138 21.76817685243439 19.282424003004277 8 26.560511068518007 34.500447471481316 19.799210889529412 19.139830570471272 9 26.513935017874473 14.894246760404018 20.183951014675113 38.4078672070464 10 17.854782701996186 26.886360532771498 32.14128515760263 23.117571607629696 11 34.39199355250901 22.43554337912905 21.261509893143323 21.910953175218616 12 21.310829297555124 26.001842314463936 30.229502879911823 22.457825508069117 13 31.043547388083358 19.929184894728373 24.834636731190347 24.192630985997923 14 21.82158080579006 21.499206256309712 27.068885003487107 29.610327934413117 15 24.96348291317346 27.742378353597573 23.869890656015137 23.424248077213825 16 23.003387127452555 26.37862671368165 26.20350929814037 24.414476860725415 17 23.21267453826308 26.625650479660166 26.62180978438459 23.53986519769217 18 23.243857326095757 25.21148209382514 27.687511278232158 23.857149301846945 19 24.48769392462971 25.07422296028599 28.46753819967714 21.97054491540716 20 23.84712081973849 25.37641861871528 27.999430601684537 22.777029959861686 21 23.073159758292245 25.998946552152987 28.571297935534844 22.356595754019928 22 23.5624521437176 25.728726205978315 27.71253676094049 22.99628488936359 23 22.83549387683439 25.928716695685257 28.08651684297287 23.14927258450749 24 22.892525153505886 25.859462253890687 28.137848040148068 23.110164552455362 25 23.191459269121786 25.546780887724896 27.935967684511876 23.32579215864144 26 22.698996786008653 26.134254856345805 28.355975146434126 22.810773211211416 27 23.29204890729171 26.203326407889154 27.999643973644297 22.504980711174838 28 22.909930209080134 26.477753229841838 27.78807043469355 22.82424612638448 29 22.86131188396467 26.573770611731312 28.125533429899384 22.439384074404632 30 22.983787388863693 26.45074643607864 27.984067820582226 22.581398354475446 31 22.72124843324018 25.98559556381407 28.348872908345164 22.944283094600593 32 22.289535995239977 26.544020464199843 28.068867933730328 23.097575606829853 33 22.408688993908534 26.013303436873603 28.095539428699627 23.482468140518236 34 22.68567627937827 26.09215961685712 28.349634951058565 22.872529152706043 35 22.409268146370724 26.163364887998007 28.251483849571553 23.175883116059715 36 22.219732882691755 25.819531215708082 28.596536790202936 23.364199111397234 37 21.941191030086664 25.445551133675703 28.9447598285221 23.66849800771553 38 21.93381445662087 25.330939909579058 29.21443150394311 23.520814129856955 39 21.432939021951707 25.36559761218488 29.876311323101234 23.32515204276218 40 21.83151784277291 25.266532059441772 29.69970030384167 23.20224979394365 41 21.228498202798466 25.422567925439303 29.866008505615948 23.482925366146283 42 20.81662935705542 25.755214810696398 29.672541101535792 23.755614730712395 43 20.634623075384923 25.466766402816997 29.46752112992036 24.431089391877723 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3003.0 1 2613.0 2 2223.0 3 4543.0 4 6863.0 5 6863.0 6 8627.0 7 10391.0 8 10148.0 9 9905.0 10 14332.5 11 18760.0 12 18760.0 13 29912.5 14 41065.0 15 52992.0 16 64919.0 17 57455.0 18 49991.0 19 49991.0 20 51882.5 21 53774.0 22 41494.5 23 29215.0 24 32017.5 25 34820.0 26 34820.0 27 39815.0 28 44810.0 29 50004.0 30 55198.0 31 62356.0 32 69514.0 33 69514.0 34 78432.0 35 87350.0 36 99305.5 37 111261.0 38 124921.5 39 138582.0 40 138582.0 41 155162.0 42 171742.0 43 189753.0 44 207764.0 45 226316.0 46 244868.0 47 244868.0 48 260904.0 49 276940.0 50 280779.0 51 284618.0 52 278728.5 53 272839.0 54 272839.0 55 257370.5 56 241902.0 57 224540.0 58 207178.0 59 189127.0 60 171076.0 61 171076.0 62 149628.5 63 128181.0 64 108220.0 65 88259.0 66 73056.5 67 57854.0 68 57854.0 69 47128.5 70 36403.0 71 29785.0 72 23167.0 73 19029.5 74 14892.0 75 14892.0 76 12018.0 77 9144.0 78 7394.5 79 5645.0 80 4434.0 81 3223.0 82 3223.0 83 2542.0 84 1861.0 85 1383.5 86 906.0 87 660.0 88 414.0 89 414.0 90 256.0 91 98.0 92 64.0 93 30.0 94 18.5 95 7.0 96 7.0 97 4.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3280656.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.40274533261842 #Duplication Level Percentage of deduplicated Percentage of total 1 82.67115794362631 48.28222583734283 2 8.955795627901592 10.460861026146286 3 3.040894970426629 5.327898436231999 4 1.4492842005699824 3.385687043219047 5 0.8856358131758219 2.586178142717698 6 0.5811316138469352 2.0363808988941665 7 0.425313629323734 1.7387638505919998 8 0.3079624953775755 1.4388684151627378 9 0.2416872920713254 1.2703681232074606 >10 1.3466437684835755 14.048624381578968 >50 0.06680962781126362 2.6203157589139545 >100 0.025128117033097114 2.655061795651042 >500 0.0016163655301937253 0.5930463196763033 >1k 7.299715280809726E-4 0.9519497285423429 >5k 0.0 0.0 >10k+ 2.0856329373742071E-4 2.60377024212319 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 27481 0.8376678322872011 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 24667 0.751892304465936 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 19988 0.6092683902243942 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13369 0.40750996142234974 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4529 0.1380516579610907 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3726 0.11357484600640846 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3641 0.11098390078081945 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3383 0.10311961997844334 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3334 0.10162601626016261 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.048170853634151E-5 2 0.0 0.0 0.0 0.0 3.048170853634151E-5 3 0.0 0.0 0.0 0.0 3.048170853634151E-5 4 0.0 0.0 0.0 0.0 3.048170853634151E-5 5 9.144512560902454E-5 0.0 0.0 0.0 3.048170853634151E-5 6 9.144512560902454E-5 0.0 0.0 0.0 6.096341707268302E-5 7 9.144512560902454E-5 0.0 0.0 0.0 6.096341707268302E-5 8 9.144512560902454E-5 0.0 0.0 0.0 9.144512560902454E-5 9 1.5240854268170755E-4 0.0 0.0 3.048170853634151E-5 9.144512560902454E-5 10 2.1337195975439059E-4 0.0 0.0 3.048170853634151E-5 9.144512560902454E-5 11 3.048170853634151E-4 0.0 0.0 3.048170853634151E-5 9.144512560902454E-5 12 3.048170853634151E-4 0.0 0.0 6.096341707268302E-5 1.2192683414536605E-4 13 3.048170853634151E-4 0.0 0.0 9.144512560902454E-5 1.2192683414536605E-4 14 3.6578050243609816E-4 0.0 0.0 1.5240854268170755E-4 2.438536682907321E-4 15 3.6578050243609816E-4 0.0 0.0 3.048170853634151E-4 2.438536682907321E-4 16 4.2674391950878117E-4 0.0 0.0 7.620427134085379E-4 2.438536682907321E-4 17 4.572256280451227E-4 0.0 0.0 0.0011887866329173189 2.438536682907321E-4 18 4.572256280451227E-4 0.0 0.0 0.001371676884135368 3.048170853634151E-4 19 4.877073365814642E-4 0.0 0.0 0.002133719597543906 3.048170853634151E-4 20 4.877073365814642E-4 0.0 0.0 0.0030176891450978097 3.048170853634151E-4 21 5.486707536541472E-4 0.0 0.0 0.005578152662150497 3.3529879389975663E-4 22 5.486707536541472E-4 0.0 0.0 0.00887017718407538 3.3529879389975663E-4 23 5.486707536541472E-4 0.0 0.0 0.010607634570646847 4.572256280451227E-4 24 5.791524621904888E-4 0.0 0.0 0.014021585926717095 4.877073365814642E-4 25 6.096341707268302E-4 0.0 0.0 0.01758794582546905 4.877073365814642E-4 26 6.096341707268302E-4 0.0 0.0 0.023775732658346378 4.877073365814642E-4 27 6.401158792631717E-4 0.0 0.0 0.05285528260201618 4.877073365814642E-4 28 6.401158792631717E-4 0.0 0.0 0.13555215786111072 4.877073365814642E-4 29 6.401158792631717E-4 0.0 0.0 0.30624972566462316 4.877073365814642E-4 30 6.705975877995133E-4 0.0 0.0 0.4995342394935647 4.877073365814642E-4 31 6.705975877995133E-4 0.0 0.0 0.9300578908608522 4.877073365814642E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCCGTT 500 0.0 15.170001 7 CTTATAC 3440 0.0 15.058139 37 TACCCGT 465 0.0 14.32258 6 TACTTAC 745 0.0 13.657718 31 GGTATCA 15125 0.0 13.50347 1 ATACCCG 480 0.0 13.489584 5 TCTTATA 5280 0.0 13.244318 37 TATACAC 1525 0.0 13.10164 37 GTACTAG 240 1.1295924E-9 12.333334 1 GGACCGT 225 5.7170837E-9 12.333333 6 TATACGT 105 0.0026453712 12.333333 4 TCTATAC 365 0.0 12.164384 3 TAATACT 460 0.0 12.065218 4 TATACCG 185 1.0409312E-6 12.0 5 GTACTTA 910 0.0 11.994505 30 CTCGTTA 435 0.0 11.908045 22 GCACCGT 420 0.0 11.892857 6 TCGTTAC 375 0.0 11.840001 23 CCGTTTT 565 0.0 11.787611 9 CCCGTTT 600 0.0 11.716667 8 >>END_MODULE