##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727127.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2702364 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.59406911874196 31.0 31.0 34.0 30.0 34.0 2 31.838008499225122 31.0 31.0 34.0 30.0 34.0 3 31.939689101838244 31.0 31.0 34.0 30.0 34.0 4 35.67506708940765 37.0 35.0 37.0 33.0 37.0 5 35.282624768535996 37.0 35.0 37.0 33.0 37.0 6 35.30218949038694 37.0 35.0 37.0 32.0 37.0 7 35.24983199894611 37.0 35.0 37.0 32.0 37.0 8 35.21149667476328 37.0 35.0 37.0 32.0 37.0 9 37.041081438325854 39.0 37.0 39.0 33.0 39.0 10 36.805954712244535 39.0 37.0 39.0 33.0 39.0 11 36.92008515507163 39.0 37.0 39.0 33.0 39.0 12 36.80900130404342 39.0 37.0 39.0 32.0 39.0 13 36.93901080683431 39.0 37.0 39.0 33.0 39.0 14 37.948801863849575 39.0 37.0 41.0 33.0 41.0 15 37.95177370628087 39.0 37.0 41.0 33.0 41.0 16 37.890749358709634 39.0 37.0 41.0 33.0 41.0 17 37.82347196750697 39.0 37.0 41.0 33.0 41.0 18 37.85476271886393 39.0 37.0 41.0 33.0 41.0 19 37.902862086676706 40.0 37.0 41.0 33.0 41.0 20 37.77956855553138 39.0 37.0 41.0 33.0 41.0 21 37.77068818264305 39.0 37.0 41.0 33.0 41.0 22 37.670313843730895 39.0 37.0 41.0 32.0 41.0 23 37.60697781645996 39.0 37.0 40.0 32.0 41.0 24 37.49769794150603 39.0 36.0 40.0 32.0 41.0 25 37.47905648535875 39.0 36.0 40.0 32.0 41.0 26 37.319572418815525 39.0 36.0 40.0 32.0 41.0 27 37.1226252273935 39.0 36.0 40.0 31.0 41.0 28 37.001090526664804 39.0 36.0 40.0 31.0 41.0 29 36.90643562451246 39.0 36.0 40.0 31.0 41.0 30 36.832659848932266 39.0 36.0 40.0 31.0 41.0 31 36.76823995583126 39.0 35.0 40.0 30.0 41.0 32 36.646262309592636 39.0 35.0 40.0 30.0 41.0 33 36.5942049257613 39.0 35.0 40.0 30.0 41.0 34 36.56624311158674 38.0 35.0 40.0 30.0 41.0 35 36.45355880999007 38.0 35.0 40.0 30.0 41.0 36 36.35120102251214 38.0 35.0 40.0 30.0 41.0 37 36.199902011720106 38.0 35.0 40.0 30.0 41.0 38 36.124749663627846 38.0 35.0 40.0 30.0 41.0 39 35.989900694355015 38.0 35.0 40.0 29.0 41.0 40 35.900304326138155 38.0 35.0 40.0 29.0 41.0 41 35.81892742798527 38.0 35.0 40.0 28.0 41.0 42 35.7243850199307 38.0 35.0 40.0 28.0 41.0 43 34.40434782286916 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 9.0 11 10.0 12 7.0 13 8.0 14 12.0 15 4.0 16 8.0 17 19.0 18 75.0 19 175.0 20 393.0 21 872.0 22 1732.0 23 3033.0 24 5240.0 25 8523.0 26 13602.0 27 20533.0 28 30362.0 29 42763.0 30 58118.0 31 77776.0 32 100434.0 33 131168.0 34 172748.0 35 229963.0 36 314303.0 37 440431.0 38 635629.0 39 414413.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.790201468047975 18.670726815484517 13.159515150438652 25.379556566028853 2 18.421944638102048 21.33591181646884 35.70492354101816 24.537220004410955 3 20.134963313602462 23.001194509695956 30.391316639801303 26.47252553690028 4 15.123980337215858 15.916619670777141 33.69786601656919 35.2615339754378 5 15.445957687417385 35.71979940526147 33.60775972444866 15.226483182872478 6 34.81869947941876 33.9839488684722 15.20298523811004 15.994366413999003 7 28.443503539863617 30.7149962033242 21.63690753725257 19.204592719559617 8 26.31022319717107 34.82780262022437 19.811098726892453 19.05087545571211 9 26.563371921769235 15.000421852866602 20.09858775501746 38.337618470346705 10 17.59533504738814 26.784030574711622 32.62162314181214 22.99901123608811 11 34.79342531206011 22.286375928631376 21.420541422251034 21.499657337057478 12 21.29901819295994 25.426663469465993 30.36293408289927 22.911384254674797 13 30.87134079642861 19.94194712481368 24.70603516032629 24.480676918431417 14 21.95966198483994 21.283772282342422 26.53839379150995 30.218171941307688 15 25.14139471958626 27.565531512409137 23.435295911283603 23.857777856721004 16 23.518889387218007 26.373242094699307 25.798560075548664 24.309308442534018 17 23.501349189080376 26.558302286442537 26.197840113323 23.742508411154088 18 23.474187785213243 25.367456049592136 27.244146236406348 23.914209928788278 19 24.58388285219904 25.237532767606435 27.775717852961336 22.402866527233193 20 23.8978168744107 25.164559622611904 27.597022458854543 23.34060104412285 21 23.340082979198954 25.81584124122435 28.08296735746924 22.76110842210746 22 23.94740308855506 25.363237520926123 27.10730308722289 23.58205630329593 23 23.29671354414135 25.643695667941106 27.44374925065609 23.61584153726145 24 23.21060375286231 25.567577128765777 27.60719873414536 23.61462038422655 25 23.645445247198378 25.298738437901036 27.240371763389387 23.815444551511195 26 23.14122005769763 25.723995731145028 27.650938215577174 23.483845995580165 27 23.672865683527462 26.002418623101846 27.257652929065067 23.067062764305625 28 23.31440176082867 26.143443296313894 27.0107949928285 23.53135995002894 29 23.163607863337436 26.339974925657682 27.52231009590122 22.974107115103664 30 23.594156819732646 26.011003698983558 27.22712410319261 23.167715378091184 31 23.32143264193869 25.52169137836354 27.664444908235904 23.492431071461876 32 22.8267546488926 26.134969234344446 27.370110022187983 23.66816609457497 33 22.934919204074657 25.56717007775414 27.485934537316215 24.011976180854987 34 23.311700422296923 25.663234116499478 27.79499726905776 23.23006819214584 35 23.076350928298332 25.658682546096678 27.624775936920415 23.640190588684572 36 22.79141522015539 25.342884970344482 28.060357524004907 23.805342285495218 37 22.548738807947412 25.03970597595291 28.359762045379526 24.051793170720153 38 22.655682210094568 24.794032188113814 28.610061412896265 23.940224188895353 39 22.09280467028128 24.903639924155296 29.236364901249424 23.767190504314 40 22.536453268323587 24.716285444891952 29.155842810220978 23.591418476563483 41 21.890426308224946 24.90822849919552 29.32606414235832 23.875281050221215 42 21.561270058363714 25.196013564419893 29.170126600265544 24.07258977695085 43 21.29069214954018 24.87799571042243 28.95017103543416 24.88114110460323 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2736.0 1 2328.0 2 1920.0 3 3344.0 4 4768.0 5 4768.0 6 5765.0 7 6762.0 8 6336.0 9 5910.0 10 8507.5 11 11105.0 12 11105.0 13 17820.0 14 24535.0 15 30855.0 16 37175.0 17 33548.0 18 29921.0 19 29921.0 20 32579.0 21 35237.0 22 28610.5 23 21984.0 24 25161.5 25 28339.0 26 28339.0 27 32895.5 28 37452.0 29 42268.5 30 47085.0 31 53342.0 32 59599.0 33 59599.0 34 67785.0 35 75971.0 36 86395.5 37 96820.0 38 108078.5 39 119337.0 40 119337.0 41 133135.5 42 146934.0 43 160853.0 44 174772.0 45 189669.5 46 204567.0 47 204567.0 48 217724.5 49 230882.0 50 235928.5 51 240975.0 52 236547.5 53 232120.0 54 232120.0 55 217888.5 56 203657.0 57 188853.5 58 174050.0 59 158222.5 60 142395.0 61 142395.0 62 124364.0 63 106333.0 64 89863.0 65 73393.0 66 60572.0 67 47751.0 68 47751.0 69 38757.5 70 29764.0 71 24288.0 72 18812.0 73 15280.0 74 11748.0 75 11748.0 76 9544.5 77 7341.0 78 5909.5 79 4478.0 80 3583.0 81 2688.0 82 2688.0 83 2195.0 84 1702.0 85 1278.5 86 855.0 87 615.0 88 375.0 89 375.0 90 228.0 91 81.0 92 52.0 93 23.0 94 15.0 95 7.0 96 7.0 97 5.5 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2702364.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.64483206287939 #Duplication Level Percentage of deduplicated Percentage of total 1 83.28372994449069 51.340115459983274 2 8.805421092410235 10.856174089691299 3 2.930078668415769 5.41872622336546 4 1.4552934518339822 3.5884528176205555 5 0.8229977392772508 2.536677871293776 6 0.5576810404127894 2.062689244853895 7 0.3813569827060265 1.6456081008443584 8 0.2970985118573312 1.4651670295661252 9 0.2154481946542292 1.1953140999939458 >10 1.1744361678656787 12.723646340741876 >50 0.05523098027472364 2.300021617402978 >100 0.01978855713440505 2.1249991681557607 >500 8.392233890581694E-4 0.354265568326355 >1k 3.596671667255351E-4 0.48297183455607867 >5k 5.994452778758919E-5 0.29684106709938635 >10k+ 1.7983358336276755E-4 1.6083294665048788 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 15909 0.5887067767332602 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15866 0.5871155773241502 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 11749 0.43476748506122787 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8033 0.2972582524041913 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2799 0.10357598014183136 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.700463742116162E-5 2 0.0 0.0 0.0 0.0 3.700463742116162E-5 3 0.0 0.0 0.0 0.0 3.700463742116162E-5 4 0.0 0.0 0.0 0.0 7.400927484232325E-5 5 3.700463742116162E-5 0.0 0.0 0.0 7.400927484232325E-5 6 7.400927484232325E-5 0.0 0.0 0.0 7.400927484232325E-5 7 1.1101391226348486E-4 0.0 0.0 0.0 7.400927484232325E-5 8 1.480185496846465E-4 0.0 0.0 0.0 7.400927484232325E-5 9 1.850231871058081E-4 0.0 0.0 0.0 7.400927484232325E-5 10 2.2202782452696972E-4 0.0 0.0 0.0 7.400927484232325E-5 11 2.2202782452696972E-4 0.0 0.0 0.0 7.400927484232325E-5 12 2.2202782452696972E-4 0.0 0.0 0.0 7.400927484232325E-5 13 2.5903246194813135E-4 0.0 0.0 0.0 7.400927484232325E-5 14 2.5903246194813135E-4 0.0 0.0 1.850231871058081E-4 7.400927484232325E-5 15 2.5903246194813135E-4 0.0 0.0 2.2202782452696972E-4 7.400927484232325E-5 16 2.96037099369293E-4 0.0 0.0 4.070510116327778E-4 2.2202782452696972E-4 17 2.96037099369293E-4 0.0 0.0 5.180649238962627E-4 2.2202782452696972E-4 18 2.96037099369293E-4 0.0 0.0 5.92074198738586E-4 2.2202782452696972E-4 19 3.3304173679045456E-4 0.0 0.0 0.0010361298477925254 2.2202782452696972E-4 20 3.3304173679045456E-4 0.0 0.0 0.001554194771688788 2.2202782452696972E-4 21 3.3304173679045456E-4 0.0 0.0 0.0024793107072178283 2.2202782452696972E-4 22 4.070510116327778E-4 0.0 0.0 0.0037744730169584854 2.5903246194813135E-4 23 4.070510116327778E-4 0.0 0.0 0.0052176538763837885 4.070510116327778E-4 24 4.070510116327778E-4 0.0 0.0 0.007067885747441869 4.070510116327778E-4 25 4.070510116327778E-4 0.0 0.0 0.008770099068815304 4.070510116327778E-4 26 4.070510116327778E-4 0.0 0.0 0.012396553536089143 4.070510116327778E-4 27 4.070510116327778E-4 0.0 0.0 0.035117400912682374 4.070510116327778E-4 28 4.070510116327778E-4 0.0 0.0 0.10279888275598698 4.070510116327778E-4 29 4.070510116327778E-4 0.0 0.0 0.2147009063175797 4.070510116327778E-4 30 4.070510116327778E-4 0.0 0.0 0.34754755465954995 4.070510116327778E-4 31 4.070510116327778E-4 0.0 0.0 0.7155956784504234 4.4405564905393945E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2280 0.0 16.796053 37 GGTATCA 8635 0.0 14.63289 1 TATACAC 965 0.0 13.994819 37 TCTTATA 3560 0.0 13.511236 37 ACGGATG 815 0.0 13.392637 28 TAATCGA 140 9.569443E-6 13.214285 20 GTTACGG 660 0.0 13.174242 25 CGTTACG 325 0.0 13.092307 24 TACGGAT 820 0.0 13.085366 27 GTACTAG 170 3.7364953E-7 13.058823 1 TCGTTAC 375 0.0 12.826666 23 GCACCGT 275 3.6379788E-12 12.781818 6 AGTGTAC 870 0.0 12.75862 27 TAGTACT 310 0.0 12.532258 4 CGAACGG 105 0.002645163 12.333333 29 TTACGGA 895 0.0 12.195531 26 CTCTTAT 5320 0.0 11.475564 37 CGACCGA 210 3.8465805E-7 11.45238 18 TAAGGCG 210 3.8465805E-7 11.45238 5 CTCGTTA 440 0.0 11.352273 22 >>END_MODULE