##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727124.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9553423 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.959515034558816 33.0 31.0 34.0 30.0 34.0 2 32.190946323637085 33.0 31.0 34.0 30.0 34.0 3 32.308128824610826 34.0 31.0 34.0 30.0 34.0 4 35.92311645783925 37.0 35.0 37.0 35.0 37.0 5 35.63196919051946 37.0 35.0 37.0 33.0 37.0 6 35.641729775809154 37.0 35.0 37.0 33.0 37.0 7 35.605474079814115 37.0 35.0 37.0 33.0 37.0 8 35.57000626895721 37.0 35.0 37.0 33.0 37.0 9 37.38774384846143 39.0 37.0 39.0 34.0 39.0 10 37.21061016559196 39.0 37.0 39.0 34.0 39.0 11 37.29819489831027 39.0 37.0 39.0 34.0 39.0 12 37.202301101919176 39.0 37.0 39.0 34.0 39.0 13 37.27316324211751 39.0 37.0 39.0 34.0 39.0 14 38.46686376181605 40.0 38.0 41.0 34.0 41.0 15 38.41712651057113 40.0 38.0 41.0 34.0 41.0 16 38.37832481614181 40.0 38.0 41.0 34.0 41.0 17 38.33059103527605 40.0 38.0 41.0 34.0 41.0 18 38.328937596503366 40.0 38.0 41.0 34.0 41.0 19 38.378993791021294 40.0 38.0 41.0 34.0 41.0 20 38.29447497509531 40.0 38.0 41.0 34.0 41.0 21 38.2392061986578 40.0 38.0 41.0 34.0 41.0 22 38.18136473178252 40.0 38.0 41.0 34.0 41.0 23 38.12490423589534 40.0 38.0 41.0 33.0 41.0 24 38.045332861321015 40.0 37.0 41.0 33.0 41.0 25 38.01452170598957 40.0 37.0 41.0 33.0 41.0 26 37.8586395682469 40.0 37.0 41.0 33.0 41.0 27 37.73123832159426 40.0 37.0 41.0 33.0 41.0 28 37.65165752631282 40.0 37.0 41.0 32.0 41.0 29 37.56682698965596 39.0 37.0 41.0 32.0 41.0 30 37.517491479232106 39.0 37.0 41.0 32.0 41.0 31 37.477925451432434 39.0 37.0 41.0 32.0 41.0 32 37.37786958663926 39.0 36.0 41.0 32.0 41.0 33 37.30849738360795 39.0 36.0 41.0 31.0 41.0 34 37.27219489810092 39.0 36.0 41.0 31.0 41.0 35 37.20004044623587 39.0 36.0 41.0 31.0 41.0 36 37.08959437889435 39.0 36.0 41.0 31.0 41.0 37 37.01627060792765 39.0 36.0 40.0 31.0 41.0 38 36.982277242408294 39.0 36.0 40.0 31.0 41.0 39 36.88871234948981 39.0 36.0 40.0 30.0 41.0 40 36.81515829457148 39.0 36.0 40.0 30.0 41.0 41 36.76494058726385 39.0 35.0 40.0 30.0 41.0 42 36.64418460273349 39.0 35.0 40.0 30.0 41.0 43 35.34569043996063 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 1.0 10 11.0 11 10.0 12 10.0 13 5.0 14 11.0 15 42.0 16 56.0 17 106.0 18 208.0 19 478.0 20 1084.0 21 2358.0 22 4623.0 23 8417.0 24 14232.0 25 23088.0 26 36359.0 27 54806.0 28 79812.0 29 112850.0 30 155556.0 31 208230.0 32 272047.0 33 359417.0 34 479688.0 35 651376.0 36 920286.0 37 1401002.0 38 2455511.0 39 2311740.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.77833191307451 18.24179668376455 12.397566819767114 26.582304583393828 2 18.309248946686438 20.344278694662634 36.06772148579624 25.278750872854683 3 19.757871079297963 22.356635940855963 29.7243616241006 28.16113135574547 4 14.855115281716301 15.322821987469831 34.249357533943595 35.572705196870274 5 15.506117545512222 35.499108539420895 33.809483783979836 15.185290131087045 6 35.42308343302709 34.193880036506286 15.232948441621396 15.150088088845223 7 29.57479219751915 30.040101856685297 21.319761513752713 19.06534443204284 8 26.379298812582675 35.10397268078677 19.58744002018962 18.929288486440935 9 26.920738252666087 14.845705042056654 19.42565507671962 38.80790162855764 10 17.209370923908633 26.21845593982387 33.00154300715042 23.57063012911707 11 35.88344198723327 21.671300433362994 21.42117019208717 21.024087387316566 12 21.61023331637257 24.535572223694064 30.358312408023803 23.49588205190956 13 30.88591387610493 19.68087249983592 24.373871019842834 25.05934260421631 14 22.3769009285991 20.271351954163443 25.628803414231736 31.72294370300572 15 25.29078844305334 27.23070045155543 22.551435229027334 24.927075876363897 16 24.65857525621968 25.97126705265746 24.53658756657169 24.83357012455117 17 24.189832272683834 25.971664815846633 25.388763797018093 24.44973911445144 18 24.32708150785326 25.216668412986632 26.161471129248646 24.29477894991146 19 25.275631572055378 24.97152067902782 26.265549007931504 23.4872987409853 20 24.615250470956852 24.86322441704926 26.266878374379527 24.25464673761436 21 24.291063004328397 25.21680448986714 26.58998769341628 23.902144812388187 22 24.860377270010968 24.75370346314614 25.849132818676612 24.536786448166275 23 24.320832438802302 25.005979532153034 26.069975128286476 24.60321290075819 24 24.185100984223144 25.096324113357067 26.114639747449687 24.60393515497011 25 24.67249696784074 24.804889305121318 25.91410429539234 24.6085094316456 26 24.28644685784352 25.13882196988451 26.114713019616108 24.46001815265586 27 24.654911647898352 25.482761519091113 25.688342283179548 24.173984549830987 28 24.368417477170226 25.312477004315625 25.725093508368673 24.594012010145473 29 24.27003389256395 25.612557928189716 26.102790591393266 24.014617587853067 30 24.584852989342146 25.367033365946423 25.819918159177078 24.22819548553435 31 24.470035504551614 24.792453971733483 26.207601191740387 24.52990933197452 32 23.894440767461045 25.40966729935438 26.10567960824094 24.590212324943636 33 24.071016221096876 24.86322441704926 26.21097171139601 24.85478765045785 34 24.451497646445677 24.77205290710984 26.60104132309435 24.175408123350135 35 24.266045793219877 24.877355477717252 26.426255803809795 24.430342925253072 36 24.015570126016613 24.574291329924364 26.691888342011026 24.718250202047997 37 23.843171185867096 24.230990295310907 26.98462111433776 24.941217404484238 38 23.770663143461775 24.099299277337558 27.276506023024417 24.853531556176254 39 23.408960327622886 24.119030425011015 27.805981165075593 24.666028082290506 40 23.70491707527239 23.861928860472315 27.9382688278327 24.49488523642259 41 23.10652422697079 24.047150429746488 28.114739606945072 24.731585736337646 42 22.813843791905793 24.224437670141896 28.092360193827908 24.869358344124404 43 22.558574031527755 23.924283474101376 27.979510590078547 25.53763190429231 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3857.0 1 3722.5 2 3588.0 3 7047.0 4 10506.0 5 10506.0 6 12248.0 7 13990.0 8 12305.0 9 10620.0 10 14804.5 11 18989.0 12 18989.0 13 30231.5 14 41474.0 15 49344.0 16 57214.0 17 54427.5 18 51641.0 19 51641.0 20 59767.0 21 67893.0 22 62866.0 23 57839.0 24 69330.5 25 80822.0 26 80822.0 27 98230.5 28 115639.0 29 134512.0 30 153385.0 31 179090.0 32 204795.0 33 204795.0 34 237336.5 35 269878.0 36 309075.5 37 348273.0 38 393219.0 39 438165.0 40 438165.0 41 486341.5 42 534518.0 43 584075.0 44 633632.0 45 682267.0 46 730902.0 47 730902.0 48 775450.5 49 819999.0 50 841212.5 51 862426.0 52 852791.0 53 843156.0 54 843156.0 55 804220.0 56 765284.0 57 714191.0 58 663098.0 59 605179.0 60 547260.0 61 547260.0 62 479862.5 63 412465.0 64 349232.0 65 285999.0 66 238524.5 67 191050.0 68 191050.0 69 155281.5 70 119513.0 71 97964.5 72 76416.0 73 62067.5 74 47719.0 75 47719.0 76 38701.5 77 29684.0 78 24187.5 79 18691.0 80 14826.5 81 10962.0 82 10962.0 83 8582.5 84 6203.0 85 4830.5 86 3458.0 87 2527.5 88 1597.0 89 1597.0 90 1079.5 91 562.0 92 360.0 93 158.0 94 117.0 95 76.0 96 76.0 97 49.5 98 23.0 99 13.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 9553423.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.330175286116734 #Duplication Level Percentage of deduplicated Percentage of total 1 78.52621126739422 38.73711766375192 2 10.588625277009557 10.446774819077756 3 3.7825585410794873 5.597828275843473 4 1.8848298996943382 3.719159573457421 5 1.0936766123273625 2.6975629496217564 6 0.7253400266497434 2.1468690394001055 7 0.5367670394169366 1.853516849957319 8 0.372590485289507 1.4703963159416542 9 0.29295483088068314 1.3006361842432903 >10 1.955631155993769 18.247028584511966 >50 0.1659776470378961 5.651013093131754 >100 0.07209149039677354 6.0448282206595145 >500 0.0021926768337346613 0.7380986290652164 >1k 4.254232163552288E-4 0.3622426280353796 >5k 4.25422598465112E-5 0.11238094759509665 >10k+ 8.50845196930224E-5 0.8745462257061933 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 25050 0.26220968128387073 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 23967 0.2508734303924363 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 19872 0.20800921303285744 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14456 0.15131749112333873 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.1869809386646025E-5 2 0.0 0.0 0.0 0.0 4.1869809386646025E-5 3 0.0 0.0 0.0 2.0934904693323013E-5 4.1869809386646025E-5 4 0.0 0.0 0.0 2.0934904693323013E-5 6.280471407996903E-5 5 0.0 0.0 0.0 3.1402357039984514E-5 6.280471407996903E-5 6 0.0 0.0 0.0 3.1402357039984514E-5 1.0467452346661506E-4 7 0.0 0.0 0.0 3.1402357039984514E-5 1.0467452346661506E-4 8 1.0467452346661506E-5 0.0 0.0 3.1402357039984514E-5 1.3607688050659957E-4 9 2.0934904693323013E-5 0.0 0.0 4.1869809386646025E-5 1.988815945865686E-4 10 2.0934904693323013E-5 0.0 0.0 4.1869809386646025E-5 1.988815945865686E-4 11 3.1402357039984514E-5 0.0 0.0 6.280471407996903E-5 1.988815945865686E-4 12 4.1869809386646025E-5 0.0 0.0 6.280471407996903E-5 2.0934904693323012E-4 13 4.1869809386646025E-5 0.0 0.0 7.327216642663053E-5 2.0934904693323012E-4 14 4.1869809386646025E-5 0.0 0.0 8.373961877329205E-5 2.512188563198761E-4 15 4.1869809386646025E-5 0.0 0.0 1.4654433285326107E-4 3.035561180531837E-4 16 5.233726173330753E-5 0.0 0.0 2.7215376101319915E-4 3.454259274398297E-4 17 5.233726173330753E-5 0.0 0.0 4.1869809386646024E-4 3.454259274398297E-4 18 6.280471407996903E-5 1.0467452346661506E-5 0.0 5.338400696797368E-4 4.1869809386646024E-4 19 8.373961877329205E-5 1.0467452346661506E-5 0.0 6.803844025329978E-4 4.1869809386646024E-4 20 9.420707111995356E-5 1.0467452346661506E-5 0.0 9.10668354159551E-4 4.1869809386646024E-4 21 1.0467452346661506E-4 1.0467452346661506E-5 0.0 0.0014863782332259338 4.2916554621312173E-4 22 1.2560942815993806E-4 1.0467452346661506E-5 0.0 0.0023028395162655313 4.2916554621312173E-4 23 1.2560942815993806E-4 1.0467452346661506E-5 0.0 0.002941354109411883 5.757098790663828E-4 24 1.2560942815993806E-4 1.0467452346661506E-5 0.0 0.004145111129277956 5.757098790663828E-4 25 1.2560942815993806E-4 1.0467452346661506E-5 0.0 0.005254661078024076 5.861773314130443E-4 26 1.2560942815993806E-4 1.0467452346661506E-5 0.0 0.008049470854582698 5.966447837597058E-4 27 1.2560942815993806E-4 1.0467452346661506E-5 0.0 0.0264303171753203 5.966447837597058E-4 28 1.2560942815993806E-4 1.0467452346661506E-5 0.0 0.08475496165091821 5.966447837597058E-4 29 1.2560942815993806E-4 1.0467452346661506E-5 0.0 0.16624407816967804 6.071122361063674E-4 30 1.2560942815993806E-4 1.0467452346661506E-5 0.0 0.26652227165069525 6.071122361063674E-4 31 1.2560942815993806E-4 1.0467452346661506E-5 0.0 0.5750504295685431 6.280471407996903E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10560 0.0 18.762783 1 CTTATAC 6825 0.0 16.480587 37 TCTTATA 10830 0.0 13.546168 37 GTATCAA 14745 0.0 13.449983 2 GTACTAG 705 0.0 12.333333 1 CTCTTAT 15945 0.0 11.985261 37 TCTATAC 1030 0.0 11.495146 3 TACTTAC 2160 0.0 11.391204 31 TCGTTAC 1180 0.0 11.288136 23 TATACTG 1550 0.0 11.219356 5 CTATACT 1305 0.0 11.057471 4 GGGTAAG 4225 0.0 10.815385 1 GTATTAT 1025 0.0 10.468292 1 GTTACGG 1700 0.0 10.447059 25 TACGGAT 2330 0.0 10.401288 27 GTACTTA 2515 0.0 10.29821 30 AACGCAG 19100 0.0 10.296073 7 GGAGTGT 3310 0.0 10.228097 6 GAGTGTC 2900 0.0 10.206897 7 GTAAGAG 4385 0.0 10.125428 3 >>END_MODULE