##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727120.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5453432 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.638636366970378 31.0 31.0 31.0 28.0 34.0 2 31.05659408607277 31.0 31.0 34.0 28.0 34.0 3 31.379588670033844 31.0 31.0 34.0 30.0 34.0 4 35.26172582696548 35.0 35.0 37.0 33.0 37.0 5 35.010043033451225 35.0 35.0 37.0 32.0 37.0 6 34.86055808525714 35.0 35.0 37.0 32.0 37.0 7 34.76510480005985 35.0 35.0 37.0 32.0 37.0 8 34.73987499981663 35.0 35.0 37.0 32.0 37.0 9 36.137495434067944 37.0 35.0 39.0 32.0 39.0 10 35.98634034494241 37.0 35.0 39.0 30.0 39.0 11 35.951801911163464 37.0 35.0 39.0 30.0 39.0 12 35.77106141600372 37.0 35.0 39.0 30.0 39.0 13 35.86753735995975 37.0 35.0 39.0 30.0 39.0 14 36.690493252689315 38.0 36.0 40.0 31.0 41.0 15 36.65810814180868 38.0 36.0 40.0 31.0 41.0 16 36.523149825651075 38.0 35.0 40.0 30.0 41.0 17 36.418624821946985 38.0 35.0 40.0 30.0 41.0 18 36.27425775181574 38.0 35.0 40.0 30.0 41.0 19 36.1955117437973 38.0 34.0 40.0 29.0 41.0 20 36.64087862468992 38.0 35.0 40.0 30.0 41.0 21 36.72348055316358 39.0 35.0 40.0 30.0 41.0 22 36.67825820510827 39.0 35.0 40.0 30.0 41.0 23 36.59703100726295 38.0 35.0 40.0 30.0 41.0 24 36.420595874304475 38.0 35.0 40.0 30.0 41.0 25 36.100722077400064 38.0 34.0 40.0 29.0 41.0 26 35.91283929092725 38.0 34.0 40.0 27.0 41.0 27 35.74448970849916 38.0 34.0 40.0 27.0 41.0 28 35.47455858989348 38.0 34.0 40.0 27.0 41.0 29 35.29161984599789 38.0 34.0 40.0 26.0 41.0 30 35.0101015287254 38.0 34.0 40.0 25.0 41.0 31 34.867598972536925 38.0 33.0 40.0 25.0 41.0 32 34.68957804919911 38.0 33.0 40.0 24.0 41.0 33 34.59855610191894 38.0 33.0 40.0 24.0 41.0 34 34.41200550405689 38.0 33.0 40.0 24.0 41.0 35 33.990486357948534 37.0 32.0 40.0 22.0 41.0 36 33.95532006266879 37.0 32.0 40.0 22.0 41.0 37 33.81383759804835 37.0 32.0 40.0 21.0 41.0 38 33.68879267221082 37.0 32.0 40.0 21.0 41.0 39 33.56485695613331 37.0 31.0 40.0 20.0 41.0 40 33.35409591611301 37.0 31.0 40.0 18.0 41.0 41 33.13842329014096 37.0 31.0 40.0 18.0 41.0 42 32.969574755860165 37.0 31.0 40.0 16.0 41.0 43 32.848776146837444 37.0 30.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 28.0 11 50.0 12 54.0 13 68.0 14 146.0 15 317.0 16 560.0 17 987.0 18 1814.0 19 3586.0 20 6885.0 21 12299.0 22 20089.0 23 31164.0 24 45113.0 25 62203.0 26 83480.0 27 107821.0 28 136571.0 29 168803.0 30 207604.0 31 250075.0 32 300869.0 33 358972.0 34 425699.0 35 501913.0 36 596103.0 37 696558.0 38 828382.0 39 605211.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.144541639099934 22.907116105967766 14.867463278170517 26.080878976761788 2 19.227800034913795 23.880008038974356 32.650650086037565 24.241541840074287 3 18.847012303444878 25.614512109071864 30.471050157038725 25.067425430444533 4 15.185574882019248 17.18739685394445 33.72683477120463 33.90019349283167 5 13.110808019610404 39.98654425323356 33.28780848463867 13.614839242517373 6 33.65238624044455 38.5841246393097 14.328664958140122 13.434824162105624 7 28.46348868015591 32.60687948433207 20.75093262371292 18.178699211799103 8 27.45337248176928 36.43551436966666 18.75017420222715 17.360938946336912 9 27.816098192844436 14.661684605217411 18.395681838519305 39.12653536341885 10 16.806865841547122 28.62307625729999 32.19563386872707 22.374424032425818 11 36.936556649097305 22.83717849603699 20.131451166898202 20.094813687967502 12 21.238717196803776 27.44748628019933 28.934733210205977 22.37906331279092 13 30.064443821798825 20.502685281488795 24.753806410348567 24.679064486363817 14 22.557776460768192 21.62674807350674 24.627573975434185 31.187901490290887 15 25.381997978520683 29.03160798557679 21.162691677461094 24.42370235844144 16 24.674608576764136 26.886793490777915 23.84624948106073 24.59234845139721 17 23.893485790232646 27.763764176393874 24.391264070038833 23.951485963334648 18 24.52688508814266 25.538009825739096 25.627531433416607 24.307573652701638 19 25.297940819652652 26.01079467021868 25.15522335292711 23.536041157201556 20 24.52736185213275 25.23548473695097 25.557538812256208 24.679614598660073 21 25.24531340997742 26.13952094754276 25.189770405132034 23.425395237347786 22 24.837900243369678 25.68861223537765 24.892453046081805 24.581034475170867 23 23.856224850699522 25.559189149144977 25.378678967666602 25.2059070324889 24 24.114539247945146 26.29107688516149 25.219549817436064 24.374834049457295 25 24.621137661567982 25.683514528099003 24.919078481220634 24.77626932911238 26 24.685464126076937 26.10480886164896 25.118879267221082 24.090847745053022 27 25.15617688090729 26.019394759116825 24.51632293205453 24.308105427921355 28 24.27986633004684 26.14183141918704 25.29214630346541 24.28615594730071 29 24.278179319004987 26.269365786535893 25.49460596556444 23.957848928894684 30 24.354168164194583 26.375849190014655 25.388397618233803 23.88158502755696 31 24.82246042492141 25.788255909306283 25.022279547998398 24.36700411777391 32 23.761440502054487 26.25830852938113 24.95074661240848 25.0295043561559 33 23.928729651346163 25.54739840892854 25.5113110422941 25.012560897431197 34 24.414772202165537 25.829110915841618 25.80846336765545 23.947653514337393 35 24.932757940320887 25.723012590970235 25.549470498577776 23.794758970131102 36 24.235288896973504 26.02456581470164 25.49387248250276 24.246272805822095 37 24.379344970286603 25.670091788070337 25.635471387559246 24.315091854083814 38 24.224836763344623 24.96074031912381 26.221157612307262 24.593265305224307 39 24.4355481098875 24.955862656763667 25.920099489642485 24.68848974370635 40 24.471287072067643 25.07380673308111 26.37628927985166 24.078616914999582 41 23.42205788941716 25.5725935520971 26.7200544537825 24.28529410470324 42 24.339846907415367 25.40594620048439 26.67736573959297 23.576841152507267 43 23.618539664563524 24.704571359833587 26.641168350499285 25.035720625103604 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1040.0 1 1226.5 2 1413.0 3 1356.0 4 1299.0 5 1299.0 6 1679.5 7 2060.0 8 2955.5 9 3851.0 10 6406.5 11 8962.0 12 8962.0 13 19740.5 14 30519.0 15 38978.5 16 47438.0 17 39142.5 18 30847.0 19 30847.0 20 37323.5 21 43800.0 22 42612.0 23 41424.0 24 48892.0 25 56360.0 26 56360.0 27 66300.5 28 76241.0 29 86839.0 30 97437.0 31 110161.5 32 122886.0 33 122886.0 34 144856.5 35 166827.0 36 195161.0 37 223495.0 38 252970.5 39 282446.0 40 282446.0 41 301275.5 42 320105.0 43 338993.0 44 357881.0 45 388677.0 46 419473.0 47 419473.0 48 459044.0 49 498615.0 50 493364.5 51 488114.0 52 459583.5 53 431053.0 54 431053.0 55 409521.0 56 387989.0 57 368582.0 58 349175.0 59 322592.5 60 296010.0 61 296010.0 62 252651.0 63 209292.0 64 181441.5 65 153591.0 66 129581.0 67 105571.0 68 105571.0 69 86246.0 70 66921.0 71 59536.0 72 52151.0 73 41614.5 74 31078.0 75 31078.0 76 23862.0 77 16646.0 78 14191.0 79 11736.0 80 9149.5 81 6563.0 82 6563.0 83 5596.0 84 4629.0 85 3759.5 86 2890.0 87 2914.0 88 2938.0 89 2938.0 90 2072.5 91 1207.0 92 931.0 93 655.0 94 614.5 95 574.0 96 574.0 97 342.5 98 111.0 99 115.0 100 119.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5453432.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.761826662353386 #Duplication Level Percentage of deduplicated Percentage of total 1 83.2171145359676 43.07469857951963 2 8.597600359735614 8.900549990656438 3 2.896796225840834 4.498303923543983 4 1.4215305533370732 2.9432407238829152 5 0.8162853986931569 2.1126211657082608 6 0.5560283733429526 1.7268626568196936 7 0.39157490868302625 1.4188042784004362 8 0.30303158588284734 1.25483747373488 9 0.2278337871193931 1.0613783697031391 >10 1.3931344970490744 13.486724805788702 >50 0.10299647382209579 3.6517410322566763 >100 0.06204243609344634 6.233895622884289 >500 0.008089226724966725 2.927989913268562 >1k 0.005726879718464784 5.483357497154782 >5k 1.0737899472088995E-4 0.35877747946446603 >10k+ 1.0737899472088995E-4 0.8662164872130981 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 22079 0.4048643129684206 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12905 0.23663997277310875 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11770 0.215827390898062 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7323 0.13428241151627085 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 7015 0.12863459194136828 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8337076541891417E-5 2 0.0 0.0 0.0 0.0 1.8337076541891417E-5 3 0.0 0.0 0.0 0.0 1.8337076541891417E-5 4 0.0 0.0 0.0 0.0 1.8337076541891417E-5 5 0.0 0.0 0.0 0.0 1.8337076541891417E-5 6 1.8337076541891417E-5 0.0 0.0 0.0 3.6674153083782834E-5 7 1.8337076541891417E-5 0.0 0.0 0.0 3.6674153083782834E-5 8 1.8337076541891417E-5 0.0 0.0 0.0 3.6674153083782834E-5 9 1.8337076541891417E-5 0.0 0.0 0.0 9.168538270945709E-5 10 1.8337076541891417E-5 0.0 0.0 0.0 9.168538270945709E-5 11 1.8337076541891417E-5 0.0 0.0 0.0 9.168538270945709E-5 12 1.8337076541891417E-5 0.0 0.0 0.0 9.168538270945709E-5 13 1.8337076541891417E-5 1.8337076541891417E-5 0.0 1.8337076541891417E-5 9.168538270945709E-5 14 1.8337076541891417E-5 3.6674153083782834E-5 0.0 1.8337076541891417E-5 1.4669661233513134E-4 15 1.8337076541891417E-5 3.6674153083782834E-5 0.0 1.6503368887702276E-4 1.4669661233513134E-4 16 1.8337076541891417E-5 3.6674153083782834E-5 0.0 2.933932246702627E-4 1.8337076541891418E-4 17 3.6674153083782834E-5 3.6674153083782834E-5 0.0 5.134381431729597E-4 1.8337076541891418E-4 18 3.6674153083782834E-5 3.6674153083782834E-5 0.0 6.417976789661996E-4 2.2004491850269702E-4 19 3.6674153083782834E-5 3.6674153083782834E-5 0.0 9.351909036364623E-4 2.3838199504458844E-4 20 3.6674153083782834E-5 3.6674153083782834E-5 0.0 0.0013019324344742907 2.3838199504458844E-4 21 3.6674153083782834E-5 3.6674153083782834E-5 0.0 0.00245716825661345 2.5671907158647983E-4 22 3.6674153083782834E-5 3.6674153083782834E-5 0.0 0.004290875910802592 2.5671907158647983E-4 23 3.6674153083782834E-5 3.6674153083782834E-5 0.0 0.0077932575303038525 3.6674153083782836E-4 24 5.5011229625674255E-5 3.6674153083782834E-5 0.0 0.013551099564457759 3.6674153083782836E-4 25 5.5011229625674255E-5 3.6674153083782834E-5 0.0 0.01604494197415499 3.6674153083782836E-4 26 7.334830616756567E-5 3.6674153083782834E-5 0.0 0.02000575050720354 3.6674153083782836E-4 27 7.334830616756567E-5 3.6674153083782834E-5 0.0 0.028770873094227635 3.6674153083782836E-4 28 7.334830616756567E-5 3.6674153083782834E-5 0.0 0.04965680327544196 3.6674153083782836E-4 29 7.334830616756567E-5 3.6674153083782834E-5 0.0 0.07848268759929528 3.6674153083782836E-4 30 7.334830616756567E-5 3.6674153083782834E-5 0.0 0.12289508698375629 3.6674153083782836E-4 31 7.334830616756567E-5 3.6674153083782834E-5 0.0 0.2595796555270149 3.6674153083782836E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGT 480 0.0 19.270832 4 AAGACGG 1795 0.0 16.799442 5 ACGAACG 875 0.0 16.702858 15 CGAACGA 885 0.0 16.514126 16 CACTCTA 1125 0.0 16.444445 9 CGCTTCG 1085 0.0 16.368664 32 TCGAACG 555 0.0 16.333334 3 CAAGACG 1885 0.0 16.291777 4 TATCTAG 1645 0.0 16.194529 1 AGGTTAT 875 0.0 15.645715 1 GTAAACG 1140 0.0 15.578947 27 TTCGGGC 1175 0.0 15.114894 35 TAGAGTG 1035 0.0 14.835749 5 TAAACGC 1235 0.0 14.829959 28 CGATAAC 1000 0.0 14.799999 10 CTAGAGT 2135 0.0 14.644028 4 TAACGAA 1025 0.0 14.619512 13 CCGATAA 1045 0.0 14.516747 9 GTATTAG 1385 0.0 14.425993 1 GGTTATC 885 0.0 14.42373 2 >>END_MODULE