##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727119.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2817213 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.45592221816384 31.0 30.0 31.0 28.0 34.0 2 30.864234617687764 31.0 31.0 34.0 28.0 34.0 3 31.18522632119048 31.0 31.0 34.0 28.0 34.0 4 35.08864044003773 35.0 35.0 37.0 33.0 37.0 5 34.806448074746214 35.0 35.0 37.0 32.0 37.0 6 34.694552737048994 35.0 35.0 37.0 32.0 37.0 7 34.54022716777184 35.0 35.0 37.0 30.0 37.0 8 34.546756315550155 35.0 35.0 37.0 30.0 37.0 9 35.88366800806329 37.0 35.0 39.0 30.0 39.0 10 35.73049499629599 37.0 35.0 39.0 30.0 39.0 11 35.71699335478006 37.0 35.0 39.0 30.0 39.0 12 35.53853329513956 37.0 35.0 39.0 30.0 39.0 13 35.65642533951107 37.0 35.0 39.0 30.0 39.0 14 36.38892302427967 38.0 35.0 40.0 30.0 41.0 15 36.39368127294599 38.0 35.0 40.0 30.0 41.0 16 36.2222646991903 38.0 34.0 40.0 30.0 41.0 17 36.21786709063177 38.0 34.0 40.0 30.0 41.0 18 36.09681483082749 38.0 34.0 40.0 29.0 41.0 19 36.02550925329395 38.0 34.0 40.0 28.0 41.0 20 36.504943360690156 38.0 35.0 40.0 30.0 41.0 21 36.59277236048535 38.0 35.0 40.0 30.0 41.0 22 36.57642712851318 38.0 35.0 40.0 30.0 41.0 23 36.48356017099169 38.0 35.0 40.0 30.0 41.0 24 36.3285513022977 38.0 35.0 40.0 30.0 41.0 25 36.018374542499984 38.0 34.0 40.0 28.0 41.0 26 35.782678838980225 38.0 34.0 40.0 27.0 41.0 27 35.60484776976395 38.0 34.0 40.0 27.0 41.0 28 35.34233052310918 38.0 34.0 40.0 26.0 41.0 29 35.149718178923635 38.0 34.0 40.0 25.0 41.0 30 34.82877049055219 38.0 33.0 40.0 25.0 41.0 31 34.65576795222796 38.0 33.0 40.0 25.0 41.0 32 34.44048320095073 37.0 33.0 40.0 24.0 41.0 33 34.36191370691531 37.0 33.0 40.0 24.0 41.0 34 34.15935642778874 37.0 33.0 40.0 24.0 41.0 35 33.73868429543666 37.0 32.0 40.0 21.0 41.0 36 33.70245629279717 37.0 32.0 40.0 21.0 41.0 37 33.535985741937154 37.0 31.0 40.0 21.0 41.0 38 33.395236710891226 37.0 31.0 40.0 20.0 41.0 39 33.25565869531342 37.0 31.0 40.0 19.0 41.0 40 32.98538271689077 36.0 31.0 40.0 18.0 41.0 41 32.727646791350175 36.0 30.0 40.0 15.0 41.0 42 32.49875462025768 36.0 30.0 39.0 15.0 41.0 43 32.30070463255707 36.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 8.0 11 17.0 12 23.0 13 37.0 14 63.0 15 137.0 16 271.0 17 532.0 18 964.0 19 1955.0 20 3944.0 21 6785.0 22 11346.0 23 17333.0 24 24902.0 25 34867.0 26 45946.0 27 60278.0 28 75496.0 29 93751.0 30 115055.0 31 138019.0 32 164115.0 33 194772.0 34 229416.0 35 264929.0 36 311917.0 37 359313.0 38 397034.0 39 263981.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.32327410103532 23.486899996556883 15.320531319428103 24.869294582979702 2 18.63540314488113 25.924912315824184 31.18674377833696 24.252940760957728 3 19.889834385969397 26.378339160013812 30.601271540348563 23.130554913668224 4 15.84594420088222 17.701536944490883 31.816373131886017 34.63614572274088 5 13.171137574617184 40.9920016697353 31.98022300763201 13.856637748015505 6 33.50027136748269 37.50362503651659 14.406578416328477 14.58952517967225 7 27.513361609505566 33.19333681904776 20.43370522569646 18.859596345750216 8 28.794166433279983 35.42135436688671 18.967717385941356 16.816761813891958 9 28.365480352390822 14.262925806461919 18.880929485984908 38.49066435516235 10 17.655179072366913 29.81283275350497 31.008021047751804 21.523967126376316 11 35.65655135057236 23.60613130778539 19.379223367207235 21.35809397443502 12 21.077355528318233 29.500751274397786 28.27982832678963 21.14206487049435 13 30.420490037494503 20.451062805687748 25.37845026272419 23.74999689409356 14 22.754332029562548 22.371045426810113 25.503431937876194 29.371190605751146 15 26.089010664085393 28.808187382352703 21.70009864358854 23.402703309973365 16 23.413778084937135 26.901267316315806 25.467225942802337 24.217728655944722 17 23.429076892659516 28.819794598420494 25.191172978400996 22.55995553051899 18 23.798307050265635 25.22272898783301 27.261978416257488 23.71698554564387 19 24.61727246040679 26.94876106279504 26.51254981430229 21.921416662495876 20 23.9030559634646 25.669127609449482 27.225630436889226 23.202185990196693 21 24.31197073135755 27.148461972878867 26.490897209405183 22.048670086358396 22 24.132183118564342 26.75122541320092 25.397866614984384 23.718724853250357 23 22.61188628619845 26.682576006855 26.43250616833019 24.273031538616355 24 22.849745475404237 28.255868477108404 25.991715926342806 22.90267012114455 25 23.607444662508655 27.042470697103838 25.32634202667672 24.023742613710787 26 23.648549115739563 27.317742747885944 26.128446801857013 22.905261334517483 27 24.04514674609268 27.388415430427166 25.28048109958317 23.285956723896987 28 22.93916008480722 27.609165512156874 26.67118176722882 22.78049263580709 29 23.217023348962254 27.32058243377409 26.72765602032931 22.734738196934345 30 22.894648008510536 28.454398016763378 26.5654034678954 22.085550506830685 31 23.723765295701817 27.555317968502912 25.47350874782986 23.24740798796541 32 21.751319477795963 28.453084662040105 26.00623382044595 23.789362039717975 33 22.352693956757975 27.64082800980969 26.682292038266187 23.324185995166143 34 22.406754476853543 27.795661882860827 26.654072659752742 23.143510980532888 35 22.927304396224212 28.244190268893405 26.652830297176678 22.175675037705705 36 22.858442013436683 28.07494498995994 26.037186396626737 23.029426599976645 37 22.496027101962117 28.01942913084669 26.44365193544116 23.04089183175003 38 22.69618946100277 27.31383817978974 26.998633046205594 22.991339313001895 39 22.845805411234434 26.5595466157511 26.792542842873434 23.80210513014103 40 22.67194564273273 27.341773589714375 27.2446563323398 22.741624435213097 41 21.61678935884507 27.644022656433858 27.560180930586363 23.179007054134708 42 22.702294785662282 27.786716872313168 27.445209148190074 22.065779193834473 43 22.12133054902132 26.65875814146818 27.52422340802772 23.695687901482778 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 635.0 1 909.5 2 1184.0 3 1233.5 4 1283.0 5 1283.0 6 1682.5 7 2082.0 8 3130.0 9 4178.0 10 7323.5 11 10469.0 12 10469.0 13 23472.0 14 36475.0 15 47740.0 16 59005.0 17 44842.5 18 30680.0 19 30680.0 20 34948.5 21 39217.0 22 34826.0 23 30435.0 24 33835.5 25 37236.0 26 37236.0 27 41729.5 28 46223.0 29 49718.5 30 53214.0 31 57938.0 32 62662.0 33 62662.0 34 72507.0 35 82352.0 36 95213.0 37 108074.0 38 121639.0 39 135204.0 40 135204.0 41 144826.5 42 154449.0 43 164595.5 44 174742.0 45 195090.5 46 215439.0 47 215439.0 48 253144.0 49 290849.0 50 281417.0 51 271985.0 52 237428.0 53 202871.0 54 202871.0 55 189101.0 56 175331.0 57 166607.0 58 157883.0 59 145692.5 60 133502.0 61 133502.0 62 114014.0 63 94526.0 64 81392.5 65 68259.0 66 57717.5 67 47176.0 68 47176.0 69 38578.0 70 29980.0 71 26860.5 72 23741.0 73 18787.0 74 13833.0 75 13833.0 76 10667.0 77 7501.0 78 6495.5 79 5490.0 80 4281.5 81 3073.0 82 3073.0 83 2550.0 84 2027.0 85 1707.0 86 1387.0 87 1390.0 88 1393.0 89 1393.0 90 957.0 91 521.0 92 427.0 93 333.0 94 282.5 95 232.0 96 232.0 97 133.5 98 35.0 99 41.0 100 47.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2817213.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.23986694671208 #Duplication Level Percentage of deduplicated Percentage of total 1 85.19461489909229 45.35749961804048 2 7.728990889454495 8.229808931738143 3 2.4683330651502913 3.942411719063145 4 1.2255108027979662 2.609841283308881 5 0.7638298659942725 2.033310021772999 6 0.50266487883369 1.6057086760734487 7 0.3308741075705173 1.2330985424216505 8 0.26069807960799807 1.1103624857274537 9 0.20080514277106823 0.9621755175012476 >10 1.1575325304271824 11.135588799579251 >50 0.08463086260495882 3.128107301849714 >100 0.06588425560983623 7.263491387791386 >500 0.009618843129532994 3.4694821019803217 >1k 0.0055441943038150076 4.998829556471327 >5k 2.6719008693084376E-4 0.9042937185600258 >10k+ 2.0039256519813282E-4 2.015990338120605 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 28465 1.0103957350757646 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16688 0.5923584762671477 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11535 0.4094472089969768 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 7066 0.25081525607044974 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 7046 0.25010533459841344 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6296 0.22348327939704948 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 5020 0.17819028948112905 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 4516 0.1603002683858125 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4359 0.154727384830327 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 4269 0.15153273820616334 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 3829 0.13591446582136316 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3665 0.13009310975066493 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 3394 0.12047367380457209 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 3208 0.11387140411463385 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 2823 0.10020541577793372 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.5496073601818535E-5 2 0.0 0.0 0.0 0.0 3.5496073601818535E-5 3 0.0 0.0 0.0 0.0 3.5496073601818535E-5 4 0.0 0.0 0.0 0.0 3.5496073601818535E-5 5 0.0 0.0 0.0 0.0 3.5496073601818535E-5 6 0.0 0.0 0.0 0.0 7.099214720363707E-5 7 0.0 0.0 0.0 0.0 1.064882208054556E-4 8 7.099214720363707E-5 0.0 0.0 0.0 1.064882208054556E-4 9 7.099214720363707E-5 0.0 0.0 0.0 1.4198429440727414E-4 10 1.064882208054556E-4 0.0 0.0 7.099214720363707E-5 1.4198429440727414E-4 11 1.064882208054556E-4 0.0 0.0 1.4198429440727414E-4 1.4198429440727414E-4 12 1.064882208054556E-4 0.0 0.0 2.839685888145483E-4 1.4198429440727414E-4 13 1.064882208054556E-4 0.0 0.0 4.259528832218224E-4 1.4198429440727414E-4 14 1.4198429440727414E-4 0.0 0.0 6.389293248327336E-4 1.7748036800909267E-4 15 1.4198429440727414E-4 0.0 0.0 0.0010293861344527375 1.7748036800909267E-4 16 1.4198429440727414E-4 0.0 0.0 0.0020232761953036566 1.7748036800909267E-4 17 1.4198429440727414E-4 0.0 0.0 0.0030171662561545754 1.7748036800909267E-4 18 1.4198429440727414E-4 0.0 0.0 0.003762583801792765 2.4847251521272975E-4 19 1.4198429440727414E-4 0.0 0.0 0.005430899261078236 2.4847251521272975E-4 20 1.4198429440727414E-4 0.0 0.0 0.0070282225731600695 2.839685888145483E-4 21 1.4198429440727414E-4 0.0 0.0 0.011926680730211027 2.839685888145483E-4 22 1.4198429440727414E-4 0.0 0.0 0.019203375818583827 2.839685888145483E-4 23 1.4198429440727414E-4 0.0 0.0 0.03148501728481304 3.5496073601818534E-4 24 1.4198429440727414E-4 0.0 0.0 0.056545245247696926 3.5496073601818534E-4 25 1.4198429440727414E-4 0.0 0.0 0.07045970609960979 3.5496073601818534E-4 26 1.4198429440727414E-4 0.0 0.0 0.08756881357568633 3.5496073601818534E-4 27 1.4198429440727414E-4 0.0 0.0 0.11174163969852474 3.5496073601818534E-4 28 1.4198429440727414E-4 0.0 0.0 0.1570346296144452 3.5496073601818534E-4 29 1.4198429440727414E-4 0.0 0.0 0.20814897560106388 3.5496073601818534E-4 30 1.4198429440727414E-4 0.0 0.0 0.2887960548243956 3.5496073601818534E-4 31 1.4198429440727414E-4 0.0 0.0 0.47241724356660286 3.5496073601818534E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGTTAT 430 0.0 19.360464 1 GGTTATC 500 0.0 16.279999 2 ATACCGT 710 0.0 15.633803 6 TACCGTC 685 0.0 15.394161 7 GTTATCT 555 0.0 15.333333 3 CGTCGTA 675 0.0 15.074075 10 ACGAACG 395 0.0 14.987342 15 TAATACC 310 0.0 14.919354 4 TATCTAG 760 0.0 14.848684 1 TATACCG 100 1.0942584E-4 14.8 5 TTATCTA 565 0.0 14.734513 4 CGAACGA 390 0.0 14.705129 16 ACCGTCG 690 0.0 14.47826 8 AAGACGG 850 0.0 14.364706 5 CCGTCGT 710 0.0 14.330986 9 ACTGCGC 155 1.212029E-7 14.32258 8 TAGAGTC 925 0.0 14.2 5 ATAACGA 405 0.0 14.160494 12 CTAGAGT 950 0.0 14.021052 4 CGAACGT 225 2.7284841E-11 13.9777775 4 >>END_MODULE