##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727118.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2808321 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.28042734431 31.0 30.0 31.0 27.0 34.0 2 30.691167783170087 31.0 30.0 33.0 27.0 34.0 3 30.998078923313965 31.0 31.0 34.0 28.0 34.0 4 34.9211037484675 35.0 35.0 37.0 32.0 37.0 5 34.62265424785842 35.0 35.0 37.0 32.0 37.0 6 34.544361203722794 35.0 35.0 37.0 30.0 37.0 7 34.375369838419466 35.0 35.0 37.0 30.0 37.0 8 34.392089793153986 35.0 35.0 37.0 30.0 37.0 9 35.693057168322284 37.0 35.0 39.0 30.0 39.0 10 35.52796884686615 37.0 35.0 39.0 30.0 39.0 11 35.543638351883565 37.0 35.0 39.0 30.0 39.0 12 35.35567087950416 37.0 34.0 39.0 30.0 39.0 13 35.50215733885122 37.0 35.0 39.0 30.0 39.0 14 36.15988022736717 38.0 34.0 40.0 30.0 41.0 15 36.212221822220464 38.0 34.0 40.0 30.0 41.0 16 36.02968855768269 38.0 34.0 40.0 29.0 41.0 17 36.07555688968604 38.0 34.0 40.0 29.0 41.0 18 35.968733631233754 38.0 34.0 40.0 29.0 41.0 19 35.94714671150484 38.0 34.0 40.0 27.0 41.0 20 36.391663915912744 38.0 35.0 40.0 30.0 41.0 21 36.48394610160306 38.0 35.0 40.0 30.0 41.0 22 36.47466439911962 38.0 35.0 40.0 30.0 41.0 23 36.37209314747139 38.0 35.0 40.0 30.0 41.0 24 36.23687320644613 38.0 35.0 40.0 29.0 41.0 25 35.9317140027796 38.0 34.0 40.0 27.0 41.0 26 35.71828576576538 38.0 34.0 40.0 27.0 41.0 27 35.53794669484009 38.0 34.0 40.0 27.0 41.0 28 35.28310972997745 38.0 34.0 40.0 27.0 41.0 29 35.115091544022214 38.0 33.0 40.0 26.0 41.0 30 34.778437721328864 37.0 33.0 40.0 25.0 41.0 31 34.5930411801215 37.0 33.0 40.0 25.0 41.0 32 34.37977068860718 37.0 33.0 40.0 24.0 41.0 33 34.303213913224305 37.0 33.0 40.0 24.0 41.0 34 34.10727691029622 37.0 33.0 40.0 24.0 41.0 35 33.70060438247622 37.0 32.0 40.0 22.0 41.0 36 33.68040939764364 37.0 32.0 40.0 22.0 41.0 37 33.499170144723486 36.0 31.0 40.0 21.0 41.0 38 33.368938237473564 36.0 31.0 40.0 21.0 41.0 39 33.209735639195095 36.0 31.0 39.0 19.0 41.0 40 32.94536735650946 36.0 31.0 39.0 18.0 40.0 41 32.676083325232405 36.0 30.0 39.0 16.0 40.0 42 32.42636044811117 36.0 30.0 39.0 15.0 40.0 43 32.198990784885346 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 9.0 11 18.0 12 18.0 13 28.0 14 55.0 15 134.0 16 257.0 17 495.0 18 992.0 19 2091.0 20 3782.0 21 6721.0 22 11007.0 23 17230.0 24 25071.0 25 34525.0 26 46740.0 27 61449.0 28 77851.0 29 96798.0 30 117873.0 31 142551.0 32 169486.0 33 201995.0 34 235193.0 35 270461.0 36 317426.0 37 361392.0 38 385754.0 39 220916.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.85181323644982 24.345649945287594 16.02615940271785 23.776377415544733 2 18.455618143367513 27.17381666839368 30.59141031242511 23.7791548758137 3 20.571188265159147 26.852663922678353 30.983459511929013 21.592688300233483 4 16.470909130402113 18.33476301320255 31.24503929572154 33.94928856067379 5 13.024009719686603 41.82844482521763 31.586310824154364 13.561234630941406 6 33.029877994716415 37.62960145937733 14.459956678741499 14.880563867164758 7 26.577730964515812 33.855638297758695 20.54665403278329 19.019976704942206 8 29.168816527740237 35.5032775811597 19.10999490442866 16.217910986671395 9 28.471816434089973 14.12491663168135 19.22988860603898 38.17337832818969 10 17.852588788817233 30.721879728136493 30.909678772476507 20.515852710569767 11 34.96174404564151 24.097209685075175 19.237295166756223 21.703751102527097 12 20.686808950971063 30.654330470056664 28.38813654137116 20.270724037601116 13 30.613950470761715 20.675663501430215 25.972600710531314 22.737785317276764 14 22.50326796687416 22.81822483968179 26.590407578051085 28.08809961539297 15 26.050832508107156 29.117967639739188 22.352038816075513 22.47916103607814 16 22.36261453017657 27.209852434960247 26.558644827282922 23.86888820758026 17 22.680242037858207 29.527536204016563 26.109657692265237 21.682564065859992 18 22.894498171683363 25.565880823452876 28.5536090781645 22.986011926699263 19 23.850834715831986 27.59061375106336 27.79482829776226 20.7637232353424 20 23.198558854205057 26.06518271949681 28.604066273050694 22.132192153247438 21 23.42769932639467 27.642886977663878 27.776383112899133 21.153030583042323 22 23.301396101086734 27.570316926020922 26.40652546485961 22.72176150803274 23 21.928974643568168 27.347657194458897 27.69986052164265 23.02350764033029 24 21.829555809325214 29.253529065943674 27.140273494376178 21.776641630354934 25 22.706414259623457 27.927149353652947 26.368566841183753 22.997869545539846 26 22.551980346976006 28.079197499146286 27.45544401797373 21.91337813590398 27 23.017810285932413 28.268955009060576 26.43689948549329 22.276335219513722 28 21.816594328070046 28.55563876066874 28.03906675910624 21.58870015215497 29 22.283599346371016 28.12196326559535 27.92508406268372 21.669353325349917 30 21.89464808332096 29.371321868119775 27.837202371096463 20.8968276774628 31 22.69765457723672 28.688351509674288 26.58738085852721 22.026613054561782 32 20.576137841792303 29.678444878630327 27.215122487778288 22.530294791799086 33 21.27687682426617 28.753550609064987 28.009939034747095 21.959633531921742 34 21.13184354637522 28.976780076066806 27.828941207219543 22.062435170338436 35 21.521863063374877 29.607227948656867 27.881285650750037 20.989623337218216 36 21.74576909121144 29.343760916220045 26.971275719549155 21.939194273019357 37 21.07223497598743 29.44392752822772 27.590471317203413 21.893366178581434 38 21.657175230324455 28.58458844270295 27.94292390364207 21.815312423330525 39 21.52424883052899 27.81334469955536 27.992633320763545 22.66977314915211 40 21.4796670323656 28.62895659007642 28.331198605857377 21.5601777717006 41 20.522547101987275 28.838191930338446 28.436279186033218 22.20298178164106 42 21.37066952104122 29.24024710850362 28.286118289184177 21.10296508127098 43 20.967261221206552 28.025286283156376 28.518783999407475 22.488668496229597 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 799.0 1 1153.5 2 1508.0 3 1534.0 4 1560.0 5 1560.0 6 1998.5 7 2437.0 8 3919.0 9 5401.0 10 9608.0 11 13815.0 12 13815.0 13 30846.5 14 47878.0 15 63891.5 16 79905.0 17 60249.0 18 40593.0 19 40593.0 20 45719.5 21 50846.0 22 44772.5 23 38699.0 24 42067.0 25 45435.0 26 45435.0 27 50441.5 28 55448.0 29 58839.5 30 62231.0 31 67141.0 32 72051.0 33 72051.0 34 81554.5 35 91058.0 36 102078.5 37 113099.0 38 125281.5 39 137464.0 40 137464.0 41 146112.0 42 154760.0 43 164605.0 44 174450.0 45 193298.5 46 212147.0 47 212147.0 48 252383.0 49 292619.0 50 279896.0 51 267173.0 52 226847.5 53 186522.0 54 186522.0 55 170973.0 56 155424.0 57 146461.0 58 137498.0 59 126034.5 60 114571.0 61 114571.0 62 97395.0 63 80219.0 64 69047.0 65 57875.0 66 48988.5 67 40102.0 68 40102.0 69 32725.0 70 25348.0 71 22580.5 72 19813.0 73 15706.0 74 11599.0 75 11599.0 76 8974.5 77 6350.0 78 5396.5 79 4443.0 80 3502.5 81 2562.0 82 2562.0 83 2094.0 84 1626.0 85 1338.5 86 1051.0 87 1037.0 88 1023.0 89 1023.0 90 723.5 91 424.0 92 331.5 93 239.0 94 218.5 95 198.0 96 198.0 97 112.0 98 26.0 99 29.0 100 32.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2808321.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.66570297586358 #Duplication Level Percentage of deduplicated Percentage of total 1 85.90168402744688 46.099742601434485 2 7.40095404662419 7.943548032082988 3 2.409424940968253 3.8791044967391977 4 1.1788457237464953 2.5305433785978537 5 0.6985041690935412 1.8742858632988184 6 0.4600814960964379 1.4814358148521425 7 0.3055620349668172 1.1478740986460758 8 0.2354002281939095 1.0106334981363883 9 0.18617411438739964 0.8992048252057775 >10 1.05451022125442 10.376950441065866 >50 0.08658288944762474 3.2082272062613493 >100 0.06816802666961833 7.391672447651598 >500 0.008318444047511272 3.0042668028709314 >1k 0.005124161533259686 4.751678542929824 >5k 4.658328666599715E-4 1.6538788383633354 >10k+ 1.9964265713998778E-4 2.7469531118633697 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 39163 1.3945343142753268 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22244 0.7920746951648334 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15510 0.5522872919441901 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8117 0.2890339102972915 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 8019 0.28554428072859195 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 7359 0.2620426938373498 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 6113 0.2176745464638836 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5863 0.20877243021720096 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 5690 0.2026121657744966 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5149 0.18334798621667536 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 4984 0.17747258949386482 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 4899 0.17444586996999276 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 4648 0.1655081452583234 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3931 0.1399768758628376 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 3906 0.13908666423816934 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 2934 0.1044752362710673 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 2814 0.10020222047265963 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.5608464986730504E-5 2 0.0 0.0 0.0 1.0682539496019151E-4 3.5608464986730504E-5 3 0.0 0.0 0.0 1.4243385994692202E-4 3.5608464986730504E-5 4 0.0 0.0 0.0 1.7804232493365252E-4 3.5608464986730504E-5 5 0.0 7.121692997346101E-5 0.0 2.1365078992038303E-4 3.5608464986730504E-5 6 0.0 7.121692997346101E-5 0.0 2.4925925490711353E-4 3.5608464986730504E-5 7 0.0 7.121692997346101E-5 0.0 2.4925925490711353E-4 3.5608464986730504E-5 8 0.0 7.121692997346101E-5 0.0 2.4925925490711353E-4 3.5608464986730504E-5 9 0.0 7.121692997346101E-5 0.0 2.4925925490711353E-4 3.5608464986730504E-5 10 0.0 7.121692997346101E-5 0.0 2.4925925490711353E-4 3.5608464986730504E-5 11 0.0 7.121692997346101E-5 0.0 2.4925925490711353E-4 7.121692997346101E-5 12 0.0 7.121692997346101E-5 0.0 3.2047618488057454E-4 7.121692997346101E-5 13 0.0 7.121692997346101E-5 0.0 3.2047618488057454E-4 1.0682539496019151E-4 14 0.0 7.121692997346101E-5 0.0 4.985185098142271E-4 1.4243385994692202E-4 15 0.0 7.121692997346101E-5 0.0 9.614285546417237E-4 1.4243385994692202E-4 16 0.0 7.121692997346101E-5 0.0 0.0021365078992038305 2.4925925490711353E-4 17 0.0 7.121692997346101E-5 0.0 0.003169153383819015 2.8486771989384404E-4 18 0.0 7.121692997346101E-5 0.0 0.0039525396135270865 3.2047618488057454E-4 19 0.0 7.121692997346101E-5 0.0 0.00562613746790342 3.2047618488057454E-4 20 0.0 7.121692997346101E-5 0.0 0.007406560717239945 3.2047618488057454E-4 21 0.0 7.121692997346101E-5 0.0 0.01271222200026279 3.2047618488057454E-4 22 0.0 7.121692997346101E-5 0.0 0.020332433507423118 3.2047618488057454E-4 23 0.0 7.121692997346101E-5 0.0 0.03567968191670397 4.2730157984076605E-4 24 0.0 7.121692997346101E-5 0.0 0.06313380842147319 4.2730157984076605E-4 25 0.0 7.121692997346101E-5 0.0 0.07930005152544883 4.2730157984076605E-4 26 0.0 7.121692997346101E-5 0.0 0.10059391358751368 4.6291004482749656E-4 27 0.0 7.121692997346101E-5 0.0 0.13114597654612845 4.6291004482749656E-4 28 0.0 7.121692997346101E-5 0.0 0.18537766872091901 4.6291004482749656E-4 29 0.0 7.121692997346101E-5 0.0 0.24320581585936935 4.6291004482749656E-4 30 0.0 7.121692997346101E-5 0.0 0.33795994118905925 4.6291004482749656E-4 31 0.0 7.121692997346101E-5 0.0 0.5493317893502915 4.6291004482749656E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGTCGG 515 0.0 16.883495 37 AAGACGG 680 0.0 16.323528 5 CAAGACG 715 0.0 16.041958 4 CGCTTCG 410 0.0 15.792684 32 GGTTATC 375 0.0 15.786666 2 ATGGTCG 540 0.0 15.759259 36 TAGAGTG 425 0.0 15.6705885 5 TTAGAGT 445 0.0 15.382023 4 GTAAACG 450 0.0 15.211111 27 ATAACGC 680 0.0 14.963235 3 TAACGCC 645 0.0 14.914729 4 GTTATCT 435 0.0 14.885058 3 CGCATCG 610 0.0 14.860656 13 TAAGACT 325 0.0 14.799999 4 AATAACG 640 0.0 14.453125 2 CGCCAGT 630 0.0 14.388889 18 CGAACGT 180 3.3360266E-9 14.388887 4 TTATCTA 455 0.0 14.23077 4 ACCGTCG 445 0.0 14.134832 8 TCGTTTA 565 0.0 14.079646 30 >>END_MODULE