##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727117.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2582289 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.25355837398525 31.0 30.0 31.0 27.0 34.0 2 30.67821610981575 31.0 30.0 33.0 27.0 34.0 3 30.98474260626909 31.0 31.0 34.0 28.0 34.0 4 34.920856650824135 35.0 35.0 37.0 32.0 37.0 5 34.620465796043746 35.0 35.0 37.0 32.0 37.0 6 34.531635692209505 35.0 35.0 37.0 30.0 37.0 7 34.37854322269893 35.0 35.0 37.0 30.0 37.0 8 34.39967757288204 35.0 35.0 37.0 30.0 37.0 9 35.679735304607654 37.0 35.0 39.0 30.0 39.0 10 35.52010483722 37.0 35.0 39.0 30.0 39.0 11 35.52344373538361 37.0 35.0 39.0 30.0 39.0 12 35.32779212551345 37.0 34.0 39.0 30.0 39.0 13 35.48101161411446 37.0 34.0 39.0 30.0 39.0 14 36.12313106704943 38.0 34.0 40.0 29.0 41.0 15 36.181355766143916 38.0 34.0 40.0 30.0 41.0 16 36.003030644517324 38.0 34.0 40.0 29.0 41.0 17 36.038537901838254 38.0 34.0 40.0 29.0 41.0 18 35.94325189783173 38.0 34.0 40.0 29.0 41.0 19 35.9146942886718 38.0 34.0 40.0 27.0 41.0 20 36.35823914364349 38.0 34.0 40.0 30.0 41.0 21 36.43950890082404 38.0 35.0 40.0 30.0 41.0 22 36.41019111338816 38.0 35.0 40.0 30.0 41.0 23 36.31623493729788 38.0 35.0 40.0 30.0 41.0 24 36.164110601098486 38.0 34.0 40.0 29.0 41.0 25 35.84598238229726 38.0 34.0 40.0 27.0 41.0 26 35.60905111705158 38.0 34.0 40.0 27.0 41.0 27 35.41916299840955 38.0 34.0 40.0 27.0 41.0 28 35.15071357233834 38.0 33.0 40.0 26.0 41.0 29 34.95588216500941 38.0 33.0 40.0 25.0 41.0 30 34.6185109412618 37.0 33.0 40.0 25.0 41.0 31 34.4271926960925 37.0 33.0 40.0 24.0 41.0 32 34.219215587411014 37.0 33.0 40.0 24.0 41.0 33 34.12718560935666 37.0 33.0 40.0 24.0 41.0 34 33.92675955324908 37.0 32.0 40.0 23.0 41.0 35 33.48994090127015 36.0 31.0 40.0 21.0 41.0 36 33.447391442243685 36.0 31.0 40.0 21.0 41.0 37 33.27659103996493 36.0 31.0 39.0 20.0 41.0 38 33.136866167961834 36.0 31.0 39.0 19.0 41.0 39 32.98210928366267 36.0 31.0 39.0 18.0 40.0 40 32.68633913554989 36.0 30.0 39.0 16.0 40.0 41 32.40320545066799 35.0 30.0 39.0 15.0 40.0 42 32.138812503170634 35.0 30.0 39.0 15.0 40.0 43 31.90357159868628 35.0 30.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 8.0 11 15.0 12 14.0 13 30.0 14 78.0 15 159.0 16 252.0 17 504.0 18 1071.0 19 2104.0 20 4111.0 21 6857.0 22 11216.0 23 17423.0 24 24825.0 25 34040.0 26 45148.0 27 58769.0 28 73974.0 29 91384.0 30 110385.0 31 132485.0 32 158249.0 33 185636.0 34 216690.0 35 248336.0 36 289356.0 37 326031.0 38 344004.0 39 199129.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.43681594120565 24.701611632160457 16.613128894558276 23.248443532075612 2 18.957366894255443 26.88440372088484 30.911993196733594 23.246236188126115 3 20.411193324991896 26.62052930558896 31.273881428453592 21.694395940965556 4 16.132508793554866 18.2278203562808 31.499533940623998 34.14013690954034 5 12.71186145315261 42.09513342619668 31.521839732113637 13.671165388537068 6 32.67116887381699 38.54289740613851 14.185902507426551 14.600031212617953 7 26.732058263037175 34.0411162344726 20.20362554307438 19.02319995941585 8 29.204089859810423 35.61874755304306 18.7180056143987 16.45915697274782 9 28.4993662599345 14.054120201108397 18.980485917726483 38.46602762123062 10 17.706732282869968 31.040600025791072 30.451123015278302 20.801544676060658 11 35.414587600380905 24.01958107709865 19.069476731690372 21.496354590830073 12 20.637581618478798 30.929497046999778 27.95248711511376 20.480434219407666 13 30.428894674453556 20.826406339491825 25.84946921123081 22.895229774823807 14 22.39439505028291 22.953588850821887 26.521818433180794 28.130197665714412 15 25.768804343743092 29.83484807471201 21.958463982923675 22.437883598621223 16 22.455890878209217 27.63505556504326 25.828402630379482 24.08065092636804 17 22.463907022025808 29.72142157597387 25.69902129467306 22.11565010732726 18 22.70272614722829 26.022648897935124 28.28490536884137 22.989719585995218 19 23.90441193840039 27.190256396553604 27.885259937985253 21.02007172706076 20 23.300645280214567 26.175846313096635 28.20915861857445 22.314349788114342 21 23.908865351631828 27.478411595293945 27.608451261651968 21.004271791422262 22 23.467280385735293 27.44421712674298 26.440805037701047 22.647697449820683 23 22.03320387454696 27.41195892481438 27.756382031600644 22.79845516903801 24 22.089355606595543 28.639668139391063 27.266893829466802 22.004082424546596 25 22.56517376637549 27.813927875617328 26.73322002301059 22.887678334996586 26 22.677825758464678 28.15842843306849 27.311582863110985 21.852162945355847 27 22.970550546433806 28.319758168043936 26.43267271788711 22.27701856763515 28 21.868621211645948 28.665459210800957 27.904854956203586 21.56106462134951 29 22.49957305320977 28.17635826199159 27.766334442039604 21.55773424275904 30 22.087264438643388 29.321737419785315 27.51225753585288 21.078740605718416 31 22.60347312016587 28.749880435536067 26.737479809579796 21.909166634718265 32 20.95195386728596 29.647185113672403 26.953025009981452 22.44783600906018 33 21.250255103127497 28.824620327159355 27.72594392029707 22.199180649416082 34 21.347571863567556 28.98920299006037 27.660575559126034 22.002649587246044 35 21.744119267827884 29.381451882419046 27.64210357554867 21.232325274204396 36 21.535428451269397 29.38311707171428 27.00356156882518 22.077892908191142 37 21.17435345153079 29.265392061074497 27.531232948752056 22.029021538642652 38 21.568693511841623 28.39573727030553 28.052669550154917 21.98289966769792 39 21.52745103278525 27.929097014315595 27.955972395034017 22.587479557865134 40 21.491359022944373 28.446970885133304 28.416765125824412 21.644904966097908 41 20.526710991682187 28.77431612031031 28.585646300627076 22.11332658738042 42 21.213311135972774 28.960817321376496 28.47156147123734 21.354310071413384 43 20.756778191751582 28.03632745986216 28.589867361863835 22.617026986522422 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1145.0 1 1387.5 2 1630.0 3 1665.5 4 1701.0 5 1701.0 6 2286.0 7 2871.0 8 4466.0 9 6061.0 10 10543.5 11 15026.0 12 15026.0 13 31081.0 14 47136.0 15 63065.0 16 78994.0 17 58655.5 18 38317.0 19 38317.0 20 42483.5 21 46650.0 22 40065.5 23 33481.0 24 36571.0 25 39661.0 26 39661.0 27 43796.5 28 47932.0 29 51391.0 30 54850.0 31 59361.0 32 63872.0 33 63872.0 34 73063.0 35 82254.0 36 93222.0 37 104190.0 38 116207.5 39 128225.0 40 128225.0 41 136993.0 42 145761.0 43 154124.0 44 162487.0 45 178365.0 46 194243.0 47 194243.0 48 218271.5 49 242300.0 50 234646.5 51 226993.0 52 201990.5 53 176988.0 54 176988.0 55 163209.5 56 149431.0 57 141678.5 58 133926.0 59 122556.5 60 111187.0 61 111187.0 62 94062.5 63 76938.0 64 66443.5 65 55949.0 66 47276.5 67 38604.0 68 38604.0 69 31572.0 70 24540.0 71 21914.5 72 19289.0 73 15328.5 74 11368.0 75 11368.0 76 8809.0 77 6250.0 78 5374.5 79 4499.0 80 3593.0 81 2687.0 82 2687.0 83 2223.5 84 1760.0 85 1403.5 86 1047.0 87 1059.0 88 1071.0 89 1071.0 90 762.5 91 454.0 92 357.0 93 260.0 94 222.5 95 185.0 96 185.0 97 115.0 98 45.0 99 38.0 100 31.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2582289.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.22154185585527 #Duplication Level Percentage of deduplicated Percentage of total 1 86.36987907612425 47.694778924873546 2 7.105246547300621 7.847253392158649 3 2.3671822668022307 3.921583638799732 4 1.1354121965406683 2.5079684853967636 5 0.6978632304671625 1.9268541795452394 6 0.4448000045955057 1.47375252427532 7 0.32022621804420187 1.2378369852149091 8 0.23394500847996746 1.0335043262195953 9 0.18340684615544015 0.9115207948460743 >10 0.9844709859304899 9.961797669910775 >50 0.07948934860726052 3.060396160189059 >100 0.06469839610273104 7.493692117224748 >500 0.008872969637012307 3.395166042605049 >1k 0.004154803242727411 4.071103827831191 >5k 1.408407878890648E-4 0.5568262079541009 >10k+ 2.1126118183359717E-4 2.905964722955098 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 39098 1.5140830480244465 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20384 0.7893771766057168 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15246 0.5904064184915012 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8421 0.3261060245386942 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5898 0.22840201077416197 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4945 0.19149676895188728 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 4700 0.1820090625022993 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 4695 0.18181543584006282 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 3606 0.1396435488049556 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 3387 0.1311627009989974 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3324 0.12872300505481765 No Hit GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA 2854 0.11052209880458772 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 2813 0.1089343601742485 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 2812 0.10889563484180122 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 2682 0.10386134162365251 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 2641 0.1022736029933133 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.8725332447297724E-5 2 0.0 0.0 0.0 0.0 3.8725332447297724E-5 3 0.0 0.0 0.0 0.0 3.8725332447297724E-5 4 0.0 0.0 0.0 0.0 3.8725332447297724E-5 5 0.0 0.0 0.0 0.0 3.8725332447297724E-5 6 0.0 0.0 0.0 0.0 3.8725332447297724E-5 7 0.0 0.0 0.0 3.8725332447297724E-5 3.8725332447297724E-5 8 0.0 0.0 0.0 3.8725332447297724E-5 3.8725332447297724E-5 9 0.0 0.0 0.0 1.1617599734189319E-4 1.1617599734189319E-4 10 0.0 0.0 0.0 1.1617599734189319E-4 1.1617599734189319E-4 11 0.0 0.0 0.0 1.549013297891909E-4 1.1617599734189319E-4 12 0.0 0.0 0.0 1.9362666223648865E-4 1.1617599734189319E-4 13 0.0 0.0 0.0 2.3235199468378637E-4 1.1617599734189319E-4 14 0.0 0.0 0.0 4.25978656920275E-4 1.549013297891909E-4 15 0.0 0.0 0.0 0.0010843093085243364 1.549013297891909E-4 16 0.0 0.0 0.0 0.00255587194152165 1.549013297891909E-4 17 0.0 0.0 0.0 0.005498997207516277 1.549013297891909E-4 18 3.8725332447297724E-5 3.8725332447297724E-5 0.0 0.006157327859120339 1.549013297891909E-4 19 3.8725332447297724E-5 3.8725332447297724E-5 0.0 0.007783791821906843 1.549013297891909E-4 20 3.8725332447297724E-5 3.8725332447297724E-5 0.0 0.010029861103850112 1.549013297891909E-4 21 3.8725332447297724E-5 3.8725332447297724E-5 0.0 0.01568375964115558 1.549013297891909E-4 22 3.8725332447297724E-5 3.8725332447297724E-5 0.0 0.025094015425848926 1.549013297891909E-4 23 3.8725332447297724E-5 3.8725332447297724E-5 0.0 0.03977091642337476 1.9362666223648865E-4 24 3.8725332447297724E-5 3.8725332447297724E-5 0.0 0.06486493184922369 1.9362666223648865E-4 25 3.8725332447297724E-5 3.8725332447297724E-5 0.0 0.0750109689504157 1.9362666223648865E-4 26 3.8725332447297724E-5 3.8725332447297724E-5 0.0 0.09050110192933479 2.3235199468378637E-4 27 3.8725332447297724E-5 3.8725332447297724E-5 0.0 0.11129660545353366 2.710773271310841E-4 28 3.8725332447297724E-5 3.8725332447297724E-5 0.0 0.15373956981577197 3.098026595783818E-4 29 3.8725332447297724E-5 3.8725332447297724E-5 0.0 0.21178884315427127 3.4852799202567954E-4 30 3.8725332447297724E-5 3.8725332447297724E-5 0.0 0.3118163768656413 3.4852799202567954E-4 31 3.8725332447297724E-5 3.8725332447297724E-5 0.0 0.5481570807914993 3.4852799202567954E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTAAT 120 5.182301E-9 18.5 1 CGAACGT 255 0.0 18.137255 4 CAAGACG 900 0.0 17.677778 4 AAGACGG 830 0.0 17.608435 5 TCGAACG 270 0.0 17.12963 3 TTAGTAC 90 4.449411E-5 16.444445 3 ATACCGT 515 0.0 16.165049 6 CGCAAGA 930 0.0 15.913979 2 GCGCAAG 915 0.0 15.770491 1 TACCGTC 460 0.0 15.684783 7 TTTTACG 95 7.065125E-5 15.578948 2 TATCTAG 690 0.0 15.282609 1 TAGAGTC 780 0.0 14.942308 5 TAGACGG 75 0.004106248 14.8 5 TTAGAGT 350 0.0 14.8 4 ATAACAC 200 6.184564E-11 14.8 3 AGGTTAT 415 0.0 14.710843 1 CCGTCGT 505 0.0 14.653464 9 CGTCGTA 505 0.0 14.653464 10 ACCGTCG 505 0.0 14.653464 8 >>END_MODULE