##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727116.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3361137 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.44793681423875 31.0 30.0 31.0 28.0 34.0 2 30.83747910305352 31.0 31.0 34.0 28.0 34.0 3 31.14174340409213 31.0 31.0 34.0 28.0 34.0 4 35.062197107704925 35.0 35.0 37.0 32.0 37.0 5 34.77601210542742 35.0 35.0 37.0 32.0 37.0 6 34.68375046896333 35.0 35.0 37.0 32.0 37.0 7 34.4953779033702 35.0 35.0 37.0 30.0 37.0 8 34.53811254941408 35.0 35.0 37.0 30.0 37.0 9 35.83718128716562 37.0 35.0 39.0 30.0 39.0 10 35.67498706538888 37.0 35.0 39.0 30.0 39.0 11 35.673612828040035 37.0 35.0 39.0 30.0 39.0 12 35.50491187952172 37.0 35.0 39.0 30.0 39.0 13 35.63552839411187 37.0 35.0 39.0 30.0 39.0 14 36.31392115227674 38.0 35.0 40.0 30.0 41.0 15 36.362350002395026 38.0 35.0 40.0 30.0 41.0 16 36.179012340169415 38.0 34.0 40.0 29.0 41.0 17 36.233779819150485 38.0 34.0 40.0 30.0 41.0 18 36.14374153746188 38.0 34.0 40.0 29.0 41.0 19 36.09272011227153 38.0 34.0 40.0 29.0 41.0 20 36.57557516994993 38.0 35.0 40.0 30.0 41.0 21 36.664752433477126 38.0 35.0 40.0 30.0 41.0 22 36.65541184426579 39.0 35.0 40.0 30.0 41.0 23 36.56715569761066 38.0 35.0 40.0 30.0 41.0 24 36.404475330818116 38.0 35.0 40.0 30.0 41.0 25 36.09328033936135 38.0 34.0 40.0 29.0 41.0 26 35.85905275506473 38.0 34.0 40.0 27.0 41.0 27 35.670714404084094 38.0 34.0 40.0 27.0 41.0 28 35.407095277580176 38.0 34.0 40.0 27.0 41.0 29 35.21033150389288 38.0 34.0 40.0 26.0 41.0 30 34.8630043940488 38.0 33.0 40.0 25.0 41.0 31 34.663155354869495 37.0 33.0 40.0 25.0 41.0 32 34.43606731888644 37.0 33.0 40.0 24.0 41.0 33 34.34263167493619 37.0 33.0 40.0 24.0 41.0 34 34.13531908993891 37.0 33.0 40.0 24.0 41.0 35 33.70552911113114 37.0 32.0 40.0 22.0 41.0 36 33.67008277258559 37.0 32.0 40.0 22.0 41.0 37 33.48493024830586 36.0 32.0 40.0 21.0 41.0 38 33.31774932113746 36.0 31.0 40.0 20.0 41.0 39 33.13795480517456 36.0 31.0 40.0 19.0 41.0 40 32.83427215254838 36.0 31.0 39.0 17.0 41.0 41 32.54483557201031 36.0 30.0 39.0 15.0 41.0 42 32.268361271795825 35.0 30.0 39.0 15.0 40.0 43 32.01437638513396 35.0 30.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 12.0 11 24.0 12 30.0 13 45.0 14 90.0 15 178.0 16 352.0 17 615.0 18 1208.0 19 2397.0 20 4468.0 21 7880.0 22 12995.0 23 20269.0 24 29244.0 25 40958.0 26 54465.0 27 71222.0 28 90277.0 29 112244.0 30 136569.0 31 165282.0 32 199125.0 33 236903.0 34 277989.0 35 321312.0 36 379184.0 37 435322.0 38 459780.0 39 300694.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.05243195978027 23.473039034112563 15.789805652075472 23.684723354031686 2 18.324453897594772 26.777545812622332 30.938012940263963 23.959987349518926 3 20.21827732698786 26.886645798728225 30.97109698295547 21.92397989132844 4 15.923986436732571 17.794246411259046 31.034051869947582 35.2477152820608 5 12.878201632364286 42.05770249769646 31.21229512513176 13.851800744807486 6 33.040366994859184 37.463780857489596 14.612674223038216 14.883177924613012 7 26.994853229725535 33.86440362294069 20.15817861634322 18.982564530990555 8 29.949389150159604 34.76293885075199 18.78926684630826 16.498405152780148 9 28.888944425651204 13.949386770012648 19.12427253039671 38.03739627393944 10 18.17316580668982 30.736473996745744 30.031831490355792 21.058528706208644 11 34.94144987246875 24.238464543397072 19.03385669789717 21.78622888623701 12 21.16926504334694 30.87107130712018 27.751561450782873 20.208102198750005 13 30.559688581572246 20.432074027330632 25.9479158391937 23.060321551903417 14 22.681312900961785 22.983889082771693 26.39377686776826 27.941021148498262 15 26.20047918308596 29.229245936717245 22.125756849542284 22.44451803065451 16 22.42907682727601 27.09160620349602 26.325139379918166 24.154177589309807 17 22.68631120956986 29.493680263553674 25.866574316964762 21.953434209911705 18 23.010516976844443 25.39539447514338 28.43272975781707 23.161358790195102 19 23.824140461992474 27.13441909687109 28.00382727630561 21.03761316483083 20 23.342041696009417 26.00340301511066 28.41556294789531 22.238992340984613 21 23.901822508276215 27.445712566908163 27.702322160626004 20.950142764189618 22 23.463607701798527 27.337415880399995 26.32026007865791 22.87871633914357 23 21.879441391410108 27.396860050631677 27.64266972753565 23.08102883042256 24 21.95361272093342 29.089263543854354 27.09175496268078 21.865368772531436 25 22.600536663634955 27.901480957188003 26.38993888080135 23.1080434983757 26 22.7022284423396 28.136907242995452 27.366453673265923 21.794410641399026 27 22.930514287278385 28.263858331273017 26.420256002656245 22.385371378792353 28 21.775042195542756 28.713854865184015 28.00879583307672 21.502307106196504 29 22.297990233662002 28.209769491692843 27.90719330988293 21.58504696476222 30 21.7893230772801 29.670316919542405 27.737310320882486 20.803049682295008 31 22.58586900801723 28.853212469470897 26.48579929946325 22.075119223048628 32 20.488513262030082 29.832523934609036 27.09217148839812 22.586791314962763 33 21.04049909301525 28.967578530717432 27.913232932784354 22.078689443482965 34 21.10631015635483 29.10684687949346 27.74022600090386 22.046616963247853 35 21.506918640924187 29.642945229545838 27.776791008518842 21.073345121011133 36 21.43396713671594 29.55949132689325 27.071315450694218 21.935226085696595 37 21.03240659336409 29.48897947331513 27.536366414103323 21.942247519217457 38 21.34697276546597 28.832088665234412 28.05714256812501 21.7637960011746 39 21.461844607940705 27.949083896312466 27.895381830612674 22.69368966513415 40 21.228679461741667 28.87198587858811 28.389738353420285 21.50959630624994 41 20.234849100170567 29.12264510491539 28.56119818977923 22.08130760513481 42 21.179083149541363 29.310408947924465 28.47694098752892 21.03356691500525 43 20.71090824325221 28.149224503493908 28.573485698440738 22.566381554813148 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1268.0 1 1765.0 2 2262.0 3 2234.5 4 2207.0 5 2207.0 6 2904.5 7 3602.0 8 5576.0 9 7550.0 10 13270.5 11 18991.0 12 18991.0 13 41944.0 14 64897.0 15 86303.0 16 107709.0 17 80293.0 18 52877.0 19 52877.0 20 58898.5 21 64920.0 22 55300.0 23 45680.0 24 49631.5 25 53583.0 26 53583.0 27 58709.0 28 63835.0 29 66742.5 30 69650.0 31 74221.0 32 78792.0 33 78792.0 34 89298.0 35 99804.0 36 113549.0 37 127294.0 38 142839.5 39 158385.0 40 158385.0 41 168559.0 42 178733.0 43 189958.5 44 201184.0 45 224303.0 46 247422.0 47 247422.0 48 288772.5 49 330123.0 50 318795.5 51 307468.0 52 265493.0 53 223518.0 54 223518.0 55 207811.0 56 192104.0 57 183226.0 58 174348.0 59 161288.5 60 148229.0 61 148229.0 62 126432.5 63 104636.0 64 90459.0 65 76282.0 66 64367.0 67 52452.0 68 52452.0 69 43000.0 70 33548.0 71 30192.0 72 26836.0 73 21378.5 74 15921.0 75 15921.0 76 12211.5 77 8502.0 78 7285.0 79 6068.0 80 4771.0 81 3474.0 82 3474.0 83 2932.5 84 2391.0 85 1972.0 86 1553.0 87 1555.0 88 1557.0 89 1557.0 90 1109.0 91 661.0 92 528.5 93 396.0 94 351.0 95 306.0 96 306.0 97 180.5 98 55.0 99 59.5 100 64.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3361137.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.591158401162424 #Duplication Level Percentage of deduplicated Percentage of total 1 84.96522596504865 42.13523979423286 2 7.7486706056378685 7.685311028052374 3 2.5419457501374443 3.78174103026683 4 1.2550737957576281 2.489622536422589 5 0.786566458278187 1.950337091275745 6 0.48895059833841253 1.4548575943526019 7 0.35521362512314353 1.2330818604813059 8 0.26502765494801045 1.0514422733772324 9 0.19663059250752224 0.8776024973599462 >10 1.2050057333913822 11.04503649504477 >50 0.0959648636886065 3.2976203404166653 >100 0.07612563181198442 7.765285137186602 >500 0.011578323888168205 3.9292025789310387 >1k 0.007357059970322789 6.31188049662018 >5k 4.2212639173983213E-4 1.474213553180527 >10k+ 2.4121508099418982E-4 3.517525692798603 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 54458 1.6202255367752043 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29719 0.884194842400057 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 21186 0.6303224176818737 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12259 0.36472776920429006 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 9155 0.27237806730282044 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 8460 0.25170054062062924 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7927 0.23584281152479056 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6775 0.20156869535517297 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 5933 0.17651764864092123 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 5835 0.1736019686195475 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5211 0.1550368223610046 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 4996 0.14864017741615412 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 4837 0.14390963534066 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 4529 0.13474606955919977 No Hit GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA 4448 0.13233617076602353 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 4170 0.12406516009314705 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 3762 0.11192641061640747 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 2.9751836952793058E-5 0.0 0.0 0.0 0.0 6 2.9751836952793058E-5 0.0 0.0 0.0 0.0 7 2.9751836952793058E-5 0.0 0.0 0.0 2.9751836952793058E-5 8 5.9503673905586116E-5 0.0 0.0 0.0 5.9503673905586116E-5 9 5.9503673905586116E-5 0.0 0.0 8.925551085837917E-5 5.9503673905586116E-5 10 5.9503673905586116E-5 0.0 0.0 1.7851102171675834E-4 5.9503673905586116E-5 11 5.9503673905586116E-5 0.0 0.0 2.0826285866955142E-4 5.9503673905586116E-5 12 5.9503673905586116E-5 0.0 0.0 2.975183695279306E-4 5.9503673905586116E-5 13 5.9503673905586116E-5 0.0 0.0 4.1652571733910283E-4 5.9503673905586116E-5 14 5.9503673905586116E-5 0.0 0.0 8.628032716309987E-4 8.925551085837917E-5 15 5.9503673905586116E-5 0.0 0.0 0.0011008179672533432 8.925551085837917E-5 16 1.1900734781117223E-4 0.0 0.0 0.0022908914453650653 1.487591847639653E-4 17 1.1900734781117223E-4 0.0 0.0 0.004433023705966165 1.487591847639653E-4 18 1.1900734781117223E-4 0.0 0.0 0.005325578814549957 1.7851102171675834E-4 19 1.1900734781117223E-4 0.0 0.0 0.007735477607726195 1.7851102171675834E-4 20 1.1900734781117223E-4 0.0 0.0 0.010383391096524777 1.7851102171675834E-4 21 1.1900734781117223E-4 0.0 0.0 0.01701805073699763 1.7851102171675834E-4 22 1.1900734781117223E-4 0.0 0.0 0.02850225980077575 1.7851102171675834E-4 23 1.1900734781117223E-4 0.0 0.0 0.047454179939704924 2.975183695279306E-4 24 1.1900734781117223E-4 0.0 0.0 0.07982417854434377 2.975183695279306E-4 25 1.1900734781117223E-4 0.0 0.0 0.09654471091181348 2.975183695279306E-4 26 1.1900734781117223E-4 0.0 0.0 0.11859082209383313 2.975183695279306E-4 27 1.1900734781117223E-4 0.0 0.0 0.1512583390679999 2.975183695279306E-4 28 1.1900734781117223E-4 0.0 0.0 0.20897690275641845 2.975183695279306E-4 29 1.1900734781117223E-4 0.0 0.0 0.2751152363024774 2.975183695279306E-4 30 1.1900734781117223E-4 0.0 0.0 0.3858218216038204 2.975183695279306E-4 31 1.1900734781117223E-4 0.0 0.0 0.621813392313375 2.975183695279306E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAAGACG 920 0.0 17.293476 4 TTTGCGT 510 0.0 16.686274 3 AAGACGG 945 0.0 16.640211 5 TTTTGCG 480 0.0 16.572918 2 GGTTATC 535 0.0 16.252337 2 TATCTAG 905 0.0 16.149172 1 TTGCGTT 530 0.0 16.056604 4 AGGTTAT 580 0.0 15.948276 1 ACGAACG 385 0.0 15.857142 15 TCGTTTA 620 0.0 15.5161295 30 CGTCGTA 730 0.0 15.20548 10 ACACGCT 795 0.0 14.893081 9 TGCGTAC 300 0.0 14.799999 16 CGAACGA 415 0.0 14.710843 16 CGCAAGA 1135 0.0 14.669603 2 TACGACG 720 0.0 14.645833 5 TACCGTC 720 0.0 14.645833 7 ATACCGT 775 0.0 14.561291 6 GTGCGTA 305 0.0 14.557377 15 TTATCTA 675 0.0 14.525927 4 >>END_MODULE