##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727115.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1715837 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.328621541556686 31.0 30.0 31.0 27.0 34.0 2 30.696134889269786 31.0 30.0 33.0 27.0 34.0 3 30.996935606354217 31.0 31.0 34.0 28.0 34.0 4 34.921089240994334 35.0 35.0 37.0 32.0 37.0 5 34.607206861724045 35.0 35.0 37.0 32.0 37.0 6 34.54355629351739 35.0 35.0 37.0 30.0 37.0 7 34.32831440282498 35.0 35.0 37.0 30.0 37.0 8 34.3877390451424 35.0 35.0 37.0 30.0 37.0 9 35.64485379438723 37.0 35.0 39.0 30.0 39.0 10 35.509748303597604 37.0 35.0 39.0 30.0 39.0 11 35.514849604012504 37.0 35.0 39.0 30.0 39.0 12 35.36984107464753 37.0 34.0 39.0 30.0 39.0 13 35.50872314794471 37.0 35.0 39.0 30.0 39.0 14 36.13634745025314 38.0 34.0 40.0 29.0 41.0 15 36.22034727074891 38.0 34.0 40.0 30.0 41.0 16 36.00427721281217 38.0 34.0 40.0 29.0 41.0 17 36.14969836878445 38.0 34.0 40.0 30.0 41.0 18 36.07491795549344 38.0 34.0 40.0 29.0 41.0 19 36.03355563494667 38.0 34.0 40.0 28.0 41.0 20 36.526000430110784 38.0 35.0 40.0 30.0 41.0 21 36.61848823635345 38.0 35.0 40.0 30.0 41.0 22 36.637051188428735 38.0 35.0 40.0 30.0 41.0 23 36.554011249320304 38.0 35.0 40.0 30.0 41.0 24 36.423724398063456 38.0 35.0 40.0 30.0 41.0 25 36.1067875328484 38.0 35.0 40.0 29.0 41.0 26 35.86190529753117 38.0 34.0 40.0 27.0 41.0 27 35.65924327310811 38.0 34.0 40.0 27.0 41.0 28 35.39855300940591 38.0 34.0 40.0 27.0 41.0 29 35.19884697672332 38.0 34.0 40.0 26.0 41.0 30 34.80534398080937 37.0 33.0 40.0 25.0 41.0 31 34.61818983971088 37.0 33.0 40.0 25.0 41.0 32 34.348214311732406 37.0 33.0 40.0 24.0 41.0 33 34.27549236903039 37.0 33.0 40.0 24.0 41.0 34 34.050242534692984 36.0 33.0 40.0 24.0 41.0 35 33.62369735586772 36.0 32.0 40.0 22.0 41.0 36 33.607772183488294 36.0 32.0 40.0 22.0 41.0 37 33.40664119027623 36.0 32.0 39.0 21.0 41.0 38 33.23446108225898 36.0 31.0 39.0 20.0 41.0 39 33.028245690004354 36.0 31.0 39.0 18.0 41.0 40 32.70495507440392 35.0 31.0 39.0 16.0 40.0 41 32.3745046877996 35.0 30.0 39.0 15.0 40.0 42 32.07645423195793 35.0 30.0 39.0 15.0 40.0 43 31.766126968937026 35.0 30.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 7.0 11 5.0 12 9.0 13 13.0 14 33.0 15 75.0 16 137.0 17 265.0 18 571.0 19 1102.0 20 2182.0 21 3891.0 22 6522.0 23 10255.0 24 14904.0 25 21062.0 26 28401.0 27 37356.0 28 47901.0 29 59226.0 30 72238.0 31 87819.0 32 105104.0 33 124745.0 34 145906.0 35 166769.0 36 195203.0 37 222748.0 38 226086.0 39 135299.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.503329278946666 23.80062908073436 15.784191621931454 22.91185001838753 2 17.853968646205903 28.43014808516194 29.629387873090508 24.08649539554165 3 21.303888422967916 27.779620092118307 30.79983704745847 20.116654437455306 4 16.87992507446803 18.76996474606854 29.508047675857323 34.842062503606115 5 13.1706566532835 42.36806876177632 30.391348362344438 14.069926222595736 6 32.83616101063213 36.089267220604285 14.873382494957271 16.20118927380631 7 25.849774774643514 34.65270885288055 20.247844055117124 19.24967231735882 8 30.03152397343104 34.471281362973286 19.69009876812308 15.807095895472589 9 29.292001512964227 14.344544382712343 19.54591257794301 36.817541526380424 10 19.108050473325846 31.371977641232824 29.481238602501286 20.038733282940047 11 33.158219574470074 25.06112177322205 18.688138791738375 23.092519860569507 12 20.638557158984216 32.67658874356946 27.614161485036163 19.070692612410152 13 30.387327001341035 21.079566415691 26.51190060594334 22.021205977024625 14 22.617999262167675 24.027340592375616 27.03794124966416 26.31671889579255 15 26.805984484540197 29.02641684495672 22.68589615447155 21.481702516031532 16 21.039003122091433 27.797162550988237 27.95825011350146 23.205584213418874 17 22.046907719089866 31.049744235612124 26.372260302114945 20.531087743183065 18 22.16865588048282 25.928337015695547 29.50251101940336 22.400496084418275 19 23.135938903287435 29.0258340390142 28.606097199209486 19.23212985848889 20 22.629014294481355 27.016668832762086 29.64908671394777 20.705230158808792 21 22.693239509347332 29.183657888249293 28.6208421895553 19.502260412848074 22 22.79517226869452 29.114245700494862 26.15539821090232 21.935183819908303 23 20.80046064981697 28.983114363427294 28.223834781508966 21.992590205246767 24 20.466104880591804 31.68651800841222 27.449518806273552 20.39785830472242 25 21.550357056060687 29.826842526417135 26.30920069913401 22.31359971838817 26 21.63253269395636 29.786920319354344 27.96996451294616 20.610582473743136 27 21.946198852221976 30.02960071382072 26.692279045154056 21.33192138880325 28 20.5475228707622 30.74919121105326 28.686407858089087 20.016878060095454 29 21.301732040980585 29.499655270284997 28.821851959131315 20.376760729603102 30 20.42898014205312 31.807158838514383 28.637918403671208 19.12594261576129 31 21.687258171959225 30.6932418405711 26.68202166056566 20.937478326904014 32 18.605496909088686 32.087080532707944 27.866050213394395 21.441372344808975 33 19.631701612682324 31.013726828364234 28.70132769021766 20.65324386873578 34 19.192732176774367 31.07480489114059 28.41575277838163 21.31671015370341 35 19.49101225815739 32.12945052472933 28.60032742037851 19.77920979673477 36 20.224764939793232 31.444012455728604 27.424632992527847 20.90658961195032 37 19.210566038615557 31.789150134890438 28.286078456170372 20.714205370323636 38 20.16566841722145 30.954805147575204 28.54647615128943 20.333050283913913 39 20.059714296870858 29.540043722101807 28.547758324362977 21.852483656664358 40 19.710963220865384 30.867733939762342 29.00240524012479 20.418897599247483 41 18.666633252459295 31.08949160089216 28.87686884010544 21.367006306543104 42 19.55034190310618 31.60579938537285 28.941152335565672 19.902706375955294 43 19.385582663155066 29.90575445103468 29.13132191461077 21.57734097119948 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 794.0 1 1318.5 2 1843.0 3 1847.0 4 1851.0 5 1851.0 6 2385.0 7 2919.0 8 4474.0 9 6029.0 10 10075.5 11 14122.0 12 14122.0 13 28852.5 14 43583.0 15 55344.0 16 67105.0 17 51536.0 18 35967.0 19 35967.0 20 39247.0 21 42527.0 22 36229.0 23 29931.0 24 30676.0 25 31421.0 26 31421.0 27 33310.0 28 35199.0 29 35724.5 30 36250.0 31 37898.5 32 39547.0 33 39547.0 34 44311.0 35 49075.0 36 55003.0 37 60931.0 38 67875.5 39 74820.0 40 74820.0 41 80124.0 42 85428.0 43 92631.5 44 99835.0 45 116146.5 46 132458.0 47 132458.0 48 163937.5 49 195417.0 50 186033.5 51 176650.0 52 141099.0 53 105548.0 54 105548.0 55 94331.5 56 83115.0 57 77804.5 58 72494.0 59 66259.0 60 60024.0 61 60024.0 62 50922.5 63 41821.0 64 36004.5 65 30188.0 66 25364.5 67 20541.0 68 20541.0 69 16741.5 70 12942.0 71 11505.5 72 10069.0 73 7973.0 74 5877.0 75 5877.0 76 4583.0 77 3289.0 78 2828.0 79 2367.0 80 1828.5 81 1290.0 82 1290.0 83 1099.0 84 908.0 85 736.5 86 565.0 87 570.0 88 575.0 89 575.0 90 410.0 91 245.0 92 193.0 93 141.0 94 122.5 95 104.0 96 104.0 97 56.5 98 9.0 99 16.0 100 23.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1715837.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.80511517845907 #Duplication Level Percentage of deduplicated Percentage of total 1 86.89027599822823 45.013607559763116 2 6.910206566151427 7.159680941328375 3 2.194239499704875 3.410184900340063 4 1.0843587563030048 2.247013210601912 5 0.6659547459507479 1.7249931158809972 6 0.40873306078647864 1.2704677974772582 7 0.30532671064662253 1.1072239788475828 8 0.2226508615057004 0.9227562819908757 9 0.17270264188703588 0.8052192229123857 >10 0.9462891890376777 9.185578487146746 >50 0.09892564030536144 3.599501475268813 >100 0.08376509696174624 8.722800947197713 >500 0.009761136970373155 3.4466579595775713 >1k 0.005788581226616639 5.558799498141229 >5k 6.810095560725456E-4 2.3100610958923866 >10k+ 3.405047780362728E-4 3.515453527633012 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 29573 1.7235320138218257 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18466 1.0762094534620712 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11748 0.6846804212754475 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 8430 0.49130540954647794 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 7594 0.4425828327515958 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6586 0.3838359937453266 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 6071 0.3538214877054172 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 5364 0.3126171075690756 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5242 0.30550687507030094 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 4885 0.2847007029222473 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 4558 0.26564294860176113 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4267 0.24868329567435601 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 4017 0.2341131471112932 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3537 0.20613846187021262 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 3076 0.1792711079199248 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 2669 0.15555090605925856 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 2624 0.15292827931790723 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 2433 0.14179668581572727 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 2348 0.1368428353042859 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 2336 0.1361434681732589 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2219 0.12932463864574548 No Hit GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA 2175 0.12676029249864645 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 2079 0.12116535545043032 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAA 2068 0.12052426891365556 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 1783 0.10391429955176396 No Hit CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1773 0.10333149360924143 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.828059425225123E-5 2 0.0 0.0 0.0 0.0 5.828059425225123E-5 3 0.0 0.0 0.0 0.0 5.828059425225123E-5 4 0.0 0.0 0.0 1.1656118850450246E-4 5.828059425225123E-5 5 0.0 0.0 0.0 1.1656118850450246E-4 5.828059425225123E-5 6 0.0 0.0 0.0 1.1656118850450246E-4 5.828059425225123E-5 7 0.0 0.0 0.0 1.1656118850450246E-4 5.828059425225123E-5 8 0.0 0.0 0.0 1.1656118850450246E-4 5.828059425225123E-5 9 0.0 0.0 0.0 1.1656118850450246E-4 1.1656118850450246E-4 10 0.0 0.0 0.0 1.748417827567537E-4 1.1656118850450246E-4 11 0.0 0.0 0.0 2.9140297126125617E-4 1.1656118850450246E-4 12 0.0 0.0 0.0 4.6624475401800986E-4 1.1656118850450246E-4 13 0.0 0.0 0.0 5.245253482702611E-4 1.1656118850450246E-4 14 0.0 0.0 0.0 0.0010490506965405222 1.1656118850450246E-4 15 0.0 0.0 0.0 0.0023895043643423004 1.1656118850450246E-4 16 0.0 0.0 0.0 0.006352584773495385 1.1656118850450246E-4 17 0.0 0.0 0.0 0.011656118850450247 1.1656118850450246E-4 18 0.0 0.0 0.0 0.013812500837783542 1.1656118850450246E-4 19 0.0 0.0 0.0 0.019640560263008665 1.1656118850450246E-4 20 0.0 0.0 0.0 0.02552690028248604 1.1656118850450246E-4 21 0.0 0.0 0.0 0.04050501300531461 1.1656118850450246E-4 22 0.0 0.0 0.0 0.06352584773495384 1.1656118850450246E-4 23 0.0 0.0 0.0 0.10542959500232248 1.748417827567537E-4 24 0.0 0.0 0.0 0.18504088675089767 1.748417827567537E-4 25 0.0 0.0 0.0 0.22758572055504106 1.748417827567537E-4 26 0.0 0.0 0.0 0.27817327636599515 1.748417827567537E-4 27 0.0 0.0 0.0 0.3485179536284624 1.748417827567537E-4 28 5.828059425225123E-5 0.0 0.0 0.46338900489964957 1.748417827567537E-4 29 5.828059425225123E-5 0.0 0.0 0.5779103726053232 1.748417827567537E-4 30 5.828059425225123E-5 0.0 0.0 0.7609697191516444 1.748417827567537E-4 31 5.828059425225123E-5 0.0 0.0 1.0990554464089537 1.748417827567537E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGACT 130 6.9667294E-10 18.5 4 TTAGAGT 200 0.0 17.575 4 AGGTTAT 200 0.0 17.575 1 TAGAGTG 215 0.0 17.209303 5 TATCTAG 305 0.0 16.37705 1 AAGACGG 335 0.0 16.014925 5 CGAACGT 105 9.34839E-6 15.857142 4 CTAGAGT 470 0.0 15.744679 4 GGTTATC 215 0.0 15.488374 2 CCGATCG 210 9.094947E-12 14.97619 18 CGATCGC 210 9.094947E-12 14.97619 19 ACACGCT 325 0.0 14.8 9 GTATTAG 325 0.0 14.8 1 CTTACTC 75 0.0041055023 14.8 3 ATTAACC 290 0.0 14.672415 3 TACCGTC 215 1.2732926E-11 14.627908 7 TACTTAC 280 0.0 14.535714 31 CAAGACG 370 0.0 14.5 4 CGCCCGA 370 0.0 14.5 26 TCTAGAT 230 1.8189894E-12 14.478261 2 >>END_MODULE