##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727113.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2160749 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.274369674589693 31.0 30.0 31.0 27.0 34.0 2 30.654205092771072 31.0 30.0 33.0 27.0 34.0 3 30.97818256539746 31.0 31.0 34.0 28.0 34.0 4 34.89270294698736 35.0 35.0 37.0 32.0 37.0 5 34.57014674078294 35.0 35.0 37.0 32.0 37.0 6 34.51566979783399 35.0 35.0 37.0 30.0 37.0 7 34.317516287176346 35.0 35.0 37.0 30.0 37.0 8 34.35932354938033 35.0 35.0 37.0 30.0 37.0 9 35.65779782843819 37.0 35.0 39.0 30.0 39.0 10 35.512559302353026 37.0 35.0 39.0 30.0 39.0 11 35.521320153335715 37.0 35.0 39.0 30.0 39.0 12 35.363981193558345 37.0 34.0 39.0 30.0 39.0 13 35.49112691941544 37.0 35.0 39.0 30.0 39.0 14 36.14714110708833 38.0 34.0 40.0 30.0 41.0 15 36.19550859447349 38.0 34.0 40.0 30.0 41.0 16 35.994704614001904 38.0 34.0 40.0 29.0 41.0 17 36.110678287945525 38.0 34.0 40.0 29.0 41.0 18 36.005905822471746 38.0 34.0 40.0 29.0 41.0 19 35.95265252928498 38.0 34.0 40.0 27.0 41.0 20 36.4477012369322 38.0 35.0 40.0 30.0 41.0 21 36.53949301839316 38.0 35.0 40.0 30.0 41.0 22 36.57454706678101 38.0 35.0 40.0 30.0 41.0 23 36.4762991906973 38.0 35.0 40.0 30.0 41.0 24 36.35951005878054 38.0 35.0 40.0 30.0 41.0 25 36.062913369391815 38.0 34.0 40.0 29.0 41.0 26 35.81551165822592 38.0 34.0 40.0 27.0 41.0 27 35.64193943859282 38.0 34.0 40.0 27.0 41.0 28 35.38644377482068 38.0 34.0 40.0 27.0 41.0 29 35.204767883729204 38.0 34.0 40.0 26.0 41.0 30 34.830602721556275 37.0 33.0 40.0 25.0 41.0 31 34.654750274094766 37.0 33.0 40.0 25.0 41.0 32 34.3932279964031 37.0 33.0 40.0 24.0 41.0 33 34.36035976413734 37.0 33.0 40.0 25.0 41.0 34 34.13722001028347 37.0 33.0 40.0 24.0 41.0 35 33.7359781261035 37.0 32.0 40.0 23.0 41.0 36 33.746237994325114 36.0 32.0 40.0 23.0 41.0 37 33.559626777566486 36.0 32.0 40.0 21.0 41.0 38 33.43123102220573 36.0 32.0 40.0 21.0 41.0 39 33.26835092831236 36.0 31.0 40.0 20.0 41.0 40 32.992690034798116 36.0 31.0 39.0 18.0 41.0 41 32.72539013092219 36.0 31.0 39.0 16.0 40.0 42 32.4645953787321 36.0 30.0 39.0 15.0 40.0 43 32.18836246135021 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 6.0 11 14.0 12 17.0 13 18.0 14 36.0 15 73.0 16 175.0 17 346.0 18 676.0 19 1434.0 20 2665.0 21 4758.0 22 8002.0 23 12387.0 24 18277.0 25 26088.0 26 35148.0 27 46794.0 28 59512.0 29 73860.0 30 90613.0 31 110287.0 32 131141.0 33 155320.0 34 182033.0 35 209190.0 36 246051.0 37 280689.0 38 294784.0 39 170353.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.79168658645683 23.81766692938421 15.483380994275597 23.90726548988337 2 17.448718013984966 28.367293008118942 29.734550380446777 24.449438597449312 3 20.984390135087416 27.85686815081252 30.556672709324406 20.602069004775657 4 17.0535772549241 19.105504619000172 29.781015749631262 34.05990237644446 5 13.320519875283987 41.53735579653166 31.190434428061753 13.951689900122597 6 33.0324345863402 36.05402571052908 14.947779681952877 15.965760021177841 7 25.821555395837276 33.82600200208354 20.864801973760024 19.487640628319163 8 29.240416170503842 34.95093599487955 20.116496640748185 15.692151193868423 9 28.756741296652226 14.441196085246366 19.56020805748377 37.24185456061764 10 18.660520032636832 30.769746971999062 30.391868745513705 20.1778642498504 11 33.24226923164144 24.696158600559343 19.10388481031346 22.957687357485764 12 20.491875733831186 31.775277924460454 28.217298723729595 19.515547617978765 13 30.623917909946968 20.892894084412397 26.093960936693712 22.389227068946926 14 22.627986869367984 23.47722942368595 26.60109989637852 27.293683810567536 15 26.939223389667195 28.366367403155106 22.53639825819658 22.158010948981115 16 21.24004222609845 27.606029205613424 28.063231777499375 23.09069679078875 17 22.57689347536433 30.673391495263914 26.42227301736574 20.32744201200602 18 23.070842564314503 25.31168590150915 29.042799510725214 22.57467202345113 19 23.4590875663948 29.37166695437554 27.72899582505881 19.440249654170845 20 22.702590629453027 26.94121344033944 29.17511474030533 21.181081189902205 21 22.25899445053544 29.287853424900344 28.0860016596097 20.367150464954513 22 22.94658009791975 28.998463032957556 25.2075090628296 22.847447806293093 23 20.784366902402823 28.63544076614174 27.327560952243875 23.25263137921156 24 20.767752293302 31.788467795195093 26.650342080454507 20.7934378310484 25 22.204707719406557 29.1445697764988 25.27429146097025 23.3764310431244 26 21.992790462936696 29.160767863365898 27.43562533177153 21.41081634192588 27 22.98304893349482 29.26767523668876 25.74075008249454 22.008525747321876 28 21.115826039951887 29.919254850979915 28.053836887116457 20.91108222195174 29 21.796515930355632 28.787980464181633 28.310969946069626 21.10453365939311 30 20.881138901371703 31.093060785866385 28.3848332221836 19.64096709057831 31 22.619239902459746 29.594552629666843 25.84464923968494 21.941558228188466 32 18.870586079179024 31.116802553188734 27.43456088606312 22.57805048156912 33 20.442170747273284 30.120435089869304 28.182079454855703 21.255314708001716 34 19.827522771039117 30.131357228442546 27.814660564461676 22.226459436056665 35 20.105389381182174 31.36282835257589 28.38367621597881 20.148106050263127 36 21.407576724552456 30.20952456763835 26.768125312102427 21.614773395706766 37 20.066837934438475 30.7214766731351 27.77310090158551 21.438584490840906 38 21.050478329505186 29.837431372176965 28.21489215082363 20.897198147494226 39 20.990637968593298 28.039490010177026 28.059668198388614 22.910203822841062 40 20.493912064751623 29.700719519018637 28.62326906086732 21.182099355362425 41 19.531005220874796 29.732606610022728 28.40825102776861 22.328137141333862 42 20.558519291227256 30.440740687604162 28.61739146934697 20.383348551821616 43 20.525567754514753 28.435324972960764 28.736054025710526 22.303053246813953 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 861.0 1 1348.5 2 1836.0 3 1875.0 4 1914.0 5 1914.0 6 2508.5 7 3103.0 8 4973.0 9 6843.0 10 10768.0 11 14693.0 12 14693.0 13 29727.5 14 44762.0 15 56796.5 16 68831.0 17 52978.5 18 37126.0 19 37126.0 20 41166.5 21 45207.0 22 39643.0 23 34079.0 24 34642.0 25 35205.0 26 35205.0 27 38254.5 28 41304.0 29 42961.0 30 44618.0 31 46820.5 32 49023.0 33 49023.0 34 55088.0 35 61153.0 36 68661.5 37 76170.0 38 84330.0 39 92490.0 40 92490.0 41 99650.5 42 106811.0 43 117128.0 44 127445.0 45 149591.0 46 171737.0 47 171737.0 48 225139.5 49 278542.0 50 264825.0 51 251108.0 52 194023.0 53 136938.0 54 136938.0 55 120421.5 56 103905.0 57 97020.5 58 90136.0 59 81821.5 60 73507.0 61 73507.0 62 62573.5 63 51640.0 64 44518.0 65 37396.0 66 31551.0 67 25706.0 68 25706.0 69 20940.5 70 16175.0 71 14274.5 72 12374.0 73 9820.0 74 7266.0 75 7266.0 76 5559.0 77 3852.0 78 3234.0 79 2616.0 80 2072.5 81 1529.0 82 1529.0 83 1276.0 84 1023.0 85 839.0 86 655.0 87 634.5 88 614.0 89 614.0 90 437.5 91 261.0 92 198.0 93 135.0 94 128.5 95 122.0 96 122.0 97 68.5 98 15.0 99 19.0 100 23.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2160749.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.33869949061463 #Duplication Level Percentage of deduplicated Percentage of total 1 85.82856775290475 42.34669912070425 2 7.261063680242295 7.165028778033819 3 2.3590681376914246 3.4918006177032335 4 1.2168226943476916 2.401457969991231 5 0.7484787641664937 1.8464484410158626 6 0.47833846822189635 1.4160358763040637 7 0.33548764911370554 1.1586767011703718 8 0.25587570975410734 1.0099659800404508 9 0.191333398477687 0.8496126945007759 >10 1.1154162777017276 10.17546507286268 >50 0.10619589292463674 3.631197739432986 >100 0.08688464412783752 8.812670819433894 >500 0.008706652815843301 2.9373119481905814 >1k 0.006719264673096461 6.6090569425141785 >5k 4.73187653034962E-4 1.6366804712985243 >10k+ 5.678251836419544E-4 4.511890826803181 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 29639 1.371700276154241 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18545 0.8582672027153548 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 13966 0.6463499462454917 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 13317 0.6163140651690687 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10961 0.5072778004293881 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 10201 0.4721048118036847 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 8269 0.3826913722972914 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 7305 0.3380772130404781 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 6763 0.31299331852056855 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 6738 0.3118363123157757 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5977 0.2766170434418806 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4962 0.22964259152728983 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 4747 0.21969233816607112 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 4277 0.19794062151596506 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4137 0.19146138676912497 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 4107 0.1900729793233735 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 3921 0.18146485315971453 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 3855 0.17841035677906134 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 3648 0.16883034540337633 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3534 0.1635543971095208 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 2801 0.12963097518499372 No Hit CATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGT 2716 0.12569715408869794 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATC 2706 0.1252343516067808 No Hit ATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTC 2696 0.12477154912486366 No Hit CCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCA 2686 0.12430874664294651 No Hit AAAAAGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 2657 0.12296661944538677 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGT 2518 0.11653366494673839 No Hit GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGC 2478 0.11468245501906978 No Hit CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT 2445 0.11315520682874318 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 2405 0.11130399690107459 No Hit GCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 2349 0.10871230300233854 No Hit ACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAG 2319 0.10732389555658708 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 4.6280248191715E-5 0.0 5 0.0 0.0 0.0 4.6280248191715E-5 0.0 6 0.0 0.0 0.0 4.6280248191715E-5 0.0 7 0.0 0.0 0.0 4.6280248191715E-5 0.0 8 0.0 0.0 0.0 9.256049638343E-5 0.0 9 0.0 0.0 0.0 1.38840744575145E-4 0.0 10 0.0 0.0 0.0 2.7768148915029E-4 0.0 11 0.0 0.0 0.0 3.7024198553372E-4 0.0 12 0.0 0.0 0.0 5.090827301088651E-4 0.0 13 0.0 0.0 0.0 8.79324715642585E-4 0.0 14 0.0 0.0 0.0 0.00166608893490174 9.256049638343E-5 15 0.0 0.0 0.0 0.002637974146927755 9.256049638343E-5 16 0.0 0.0 0.0 0.00592387176853952 1.38840744575145E-4 17 0.0 0.0 0.0 0.00971885212026015 1.38840744575145E-4 18 0.0 0.0 0.0 0.01157006204792875 1.8512099276686E-4 19 0.0 0.0 0.0 0.016614609100825687 1.8512099276686E-4 20 0.0 0.0 0.0 0.02175171665010605 1.8512099276686E-4 21 0.0 0.0 0.0 0.03387714167633538 1.8512099276686E-4 22 0.0 0.0 0.0 0.05470325336260713 1.8512099276686E-4 23 0.0 0.0 0.0 0.08696058635223249 1.8512099276686E-4 24 0.0 0.0 0.0 0.14754143123518743 1.8512099276686E-4 25 0.0 0.0 0.0 0.18151113340790623 1.8512099276686E-4 26 0.0 0.0 0.0 0.2261252926647195 1.8512099276686E-4 27 0.0 0.0 0.0 0.285317730101923 1.8512099276686E-4 28 0.0 0.0 0.0 0.39560356154277987 1.8512099276686E-4 29 0.0 0.0 0.0 0.5017241706463823 1.8512099276686E-4 30 0.0 0.0 0.0 0.6666206949534629 1.8512099276686E-4 31 0.0 0.0 0.0 0.9603151499780863 1.8512099276686E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGGTATA 85 2.7249127E-5 17.411764 1 CAAGACG 475 0.0 17.136843 4 AAGACGG 450 0.0 16.444445 5 TAATACC 195 1.8189894E-12 16.128206 4 CGCCCGA 460 0.0 16.086956 26 CGCAAGA 495 0.0 16.070707 2 TATCTAG 485 0.0 16.020618 1 TAGACTC 190 2.7284841E-11 15.578948 5 GCCCGAC 495 0.0 15.323233 27 TAGAGTC 535 0.0 15.214952 5 CATTACG 135 3.9765473E-7 15.074075 24 AAAAAGT 1095 0.0 15.0365305 1 AAAAGTA 1135 0.0 14.832601 2 ACGGACC 490 0.0 14.724489 8 AGGTTAT 315 0.0 14.682539 1 CTAGAGT 610 0.0 14.557377 4 TTATCTA 280 0.0 14.535715 4 TAGGGTG 230 1.8189894E-12 14.478261 5 AGTACTC 1280 0.0 14.453125 5 TACACCG 90 8.278168E-4 14.388889 5 >>END_MODULE