##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727111.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2844637 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.42642101610856 31.0 30.0 31.0 28.0 34.0 2 30.820590817035708 31.0 31.0 34.0 27.0 34.0 3 31.149020068289907 31.0 31.0 34.0 28.0 34.0 4 35.05450080273863 35.0 35.0 37.0 32.0 37.0 5 34.75874109772178 35.0 35.0 37.0 32.0 37.0 6 34.665880391768795 35.0 35.0 37.0 31.0 37.0 7 34.50754560247933 35.0 35.0 37.0 30.0 37.0 8 34.51517293770699 35.0 35.0 37.0 30.0 37.0 9 35.847347130758685 37.0 35.0 39.0 30.0 39.0 10 35.70412745105966 37.0 35.0 39.0 30.0 39.0 11 35.691514593953464 37.0 35.0 39.0 30.0 39.0 12 35.52441594481124 37.0 35.0 39.0 30.0 39.0 13 35.63913919421002 37.0 35.0 39.0 30.0 39.0 14 36.36600100469761 38.0 35.0 40.0 30.0 41.0 15 36.380523420035665 38.0 35.0 40.0 30.0 41.0 16 36.20912474948473 38.0 34.0 40.0 30.0 41.0 17 36.22509831658662 38.0 34.0 40.0 30.0 41.0 18 36.10346135552621 38.0 34.0 40.0 29.0 41.0 19 36.04901328359295 38.0 34.0 40.0 29.0 41.0 20 36.5170754651648 38.0 35.0 40.0 30.0 41.0 21 36.613449800449054 38.0 35.0 40.0 30.0 41.0 22 36.60637086559726 38.0 35.0 40.0 30.0 41.0 23 36.52675402872141 38.0 35.0 40.0 30.0 41.0 24 36.39391458382915 38.0 35.0 40.0 30.0 41.0 25 36.08752962152992 38.0 34.0 40.0 29.0 41.0 26 35.8697946346054 38.0 34.0 40.0 27.0 41.0 27 35.69570071682257 38.0 34.0 40.0 27.0 41.0 28 35.442677220327234 38.0 34.0 40.0 27.0 41.0 29 35.27222489196337 38.0 34.0 40.0 26.0 41.0 30 34.93031096762083 38.0 33.0 40.0 25.0 41.0 31 34.765154218271086 38.0 33.0 40.0 25.0 41.0 32 34.562856350388465 37.0 33.0 40.0 25.0 41.0 33 34.49909355745566 37.0 33.0 40.0 24.0 41.0 34 34.301855034579106 37.0 33.0 40.0 24.0 41.0 35 33.906623938309174 37.0 32.0 40.0 23.0 41.0 36 33.886940934818746 37.0 32.0 40.0 23.0 41.0 37 33.72811856134895 37.0 32.0 40.0 22.0 41.0 38 33.598970624371404 37.0 32.0 40.0 21.0 41.0 39 33.45465273776584 37.0 31.0 40.0 20.0 41.0 40 33.204668996430826 36.0 31.0 40.0 19.0 41.0 41 32.97138931962145 36.0 31.0 40.0 18.0 41.0 42 32.750292568085136 36.0 31.0 40.0 15.0 41.0 43 32.545977219589005 36.0 30.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 6.0 11 17.0 12 26.0 13 26.0 14 54.0 15 116.0 16 202.0 17 459.0 18 828.0 19 1692.0 20 3382.0 21 6075.0 22 10304.0 23 16167.0 24 23227.0 25 32937.0 26 44452.0 27 58755.0 28 74715.0 29 94124.0 30 114812.0 31 139278.0 32 166728.0 33 198242.0 34 231943.0 35 268968.0 36 316857.0 37 367100.0 38 407384.0 39 265756.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.58020337920093 23.38590125910617 15.064206786314035 24.96968857537886 2 18.269466367765023 26.10371727570161 31.127697488291123 24.49911886824224 3 20.11325170839021 26.716625003471446 30.3949853707169 22.77513791742145 4 16.183822399835197 18.04121228824627 31.404499062622047 34.370466249296484 5 13.254134007256463 40.91991350741765 31.95550082488556 13.870451660440331 6 33.532222213238455 36.913778453982005 14.603796547679018 14.950202785100524 7 27.132354673021545 33.31940068275846 20.62305313472334 18.925191509496642 8 28.5490556440066 35.74238118958588 19.223436944678706 16.48512622172882 9 28.460538198722716 14.453619213980554 18.988538783683122 38.097303803613606 10 17.720011375792414 29.962698228280093 31.179338523685097 21.1379518722424 11 34.960277884313534 23.824305174966085 19.49932451838319 21.71609242233719 12 20.976068299751425 29.66287086893688 28.618589999356686 20.74247083195501 13 30.377830282035983 20.765074770524322 25.55767220914303 23.29942273829666 14 22.688905473703674 22.471373324610486 25.839465633049137 29.000255568636703 15 26.22134212555064 28.530775631477763 22.038383104768727 23.209499138202872 16 22.875642832459818 27.172887085417223 26.164744394451734 23.786725687671222 17 23.23449353994903 29.131906812714593 25.531517729678686 22.102081917657685 18 23.567260075714405 25.55826982493724 27.55585334789641 23.31861675145194 19 24.36901439445525 27.57698082391532 26.78686243622648 21.267142345402945 20 23.568666230524315 26.131066986754377 27.76431579846567 22.53595098425564 21 23.677080766368434 27.734083470052596 26.922099375069646 21.666736388509324 22 23.8091538568893 27.40729309222934 25.327133128058165 23.456419922823194 23 22.319192220307897 27.29058224300675 26.556463970622612 23.833761566062737 24 22.319860143842607 29.142312358307933 26.076367564648844 22.46145993320062 25 23.264093098697654 27.69000051676189 25.30909919262106 23.73680719191939 26 23.12653600441814 27.702691063921336 26.459122903906547 22.71165002775398 27 23.689454928695646 27.939557841650796 25.398847023363615 22.972140206289943 28 22.53148644273417 28.236994737817163 26.84275708992044 22.38876172952823 29 22.908617162752222 27.69379713474865 27.023131598161733 22.374454104337392 30 22.546075298886993 28.91426920201066 27.018245210197296 21.521410288905052 31 23.41093081472258 27.920785674938493 25.700221152997727 22.9680623573412 32 21.168711508709194 28.94091583565847 26.451599975673524 23.438772679958813 33 21.907434938095793 28.166124535397664 27.06492954988633 22.861510976620217 34 21.76358530104193 28.35328374059678 27.04148191843107 22.841649039930225 35 22.186943360435794 28.882595564917423 27.094458800894454 21.836002273752328 36 22.57402262573397 28.43550864310631 26.249746452710838 22.740722278448885 37 21.868203218899282 28.560199420875144 26.890003891533436 22.68159346869214 38 22.355154629571366 27.900044891492303 27.25110444671851 22.49369603221782 39 22.313251216236026 26.93345407515968 27.283516315086953 23.469778393517345 40 22.144020484863272 27.770467725759033 27.636250249153054 22.44926154022464 41 21.1914560627595 27.935620608183047 27.75893725631777 23.113986072739685 42 22.017466551971307 28.33939796184891 27.677345123472698 21.96579036270709 43 21.713491035938855 26.977783105542112 27.914668901515377 23.394056957003652 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 777.0 1 1154.5 2 1532.0 3 1576.5 4 1621.0 5 1621.0 6 2164.0 7 2707.0 8 4107.5 9 5508.0 10 9136.5 11 12765.0 12 12765.0 13 26922.0 14 41079.0 15 51039.5 16 61000.0 17 47643.5 18 34287.0 19 34287.0 20 38575.5 21 42864.0 22 38867.0 23 34870.0 24 37590.5 25 40311.0 26 40311.0 27 44634.0 28 48957.0 29 52375.5 30 55794.0 31 60485.0 32 65176.0 33 65176.0 34 74580.5 35 83985.0 36 95747.5 37 107510.0 38 120162.0 39 132814.0 40 132814.0 41 142918.0 42 153022.0 43 165051.0 44 177080.0 45 198345.0 46 219610.0 47 219610.0 48 264772.5 49 309935.0 50 301095.5 51 292256.0 52 247628.5 53 203001.0 54 203001.0 55 186679.5 56 170358.0 57 159858.0 58 149358.0 59 137145.5 60 124933.0 61 124933.0 62 106602.0 63 88271.0 64 75749.0 65 63227.0 66 52931.5 67 42636.0 68 42636.0 69 34712.0 70 26788.0 71 23524.5 72 20261.0 73 16115.0 74 11969.0 75 11969.0 76 9244.5 77 6520.0 78 5518.5 79 4517.0 80 3573.0 81 2629.0 82 2629.0 83 2182.0 84 1735.0 85 1366.0 86 997.0 87 1006.5 88 1016.0 89 1016.0 90 734.5 91 453.0 92 352.5 93 252.0 94 214.5 95 177.0 96 177.0 97 108.0 98 39.0 99 39.5 100 40.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2844637.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.14746999322222 #Duplication Level Percentage of deduplicated Percentage of total 1 85.75270340736617 47.29044637995411 2 7.470987433961074 8.240121106682173 3 2.377170335553255 3.932847892461034 4 1.2296208325950928 2.712419118743152 5 0.720697936914424 1.9872333925082684 6 0.4679992977204441 1.5485386336732359 7 0.33387409101964793 1.2888617991214266 8 0.24701007668012256 1.0897584633392463 9 0.18908667958651582 0.9384886789753865 >10 1.0636131846017627 10.610175453315799 >50 0.0758184766803623 2.9088305110141164 >100 0.05977497452959189 6.89592104310916 >500 0.006525350685449659 2.51716150488305 >1k 0.004478181842941639 4.302791028428589 >5k 4.4781818429416386E-4 1.7360610435050057 >10k+ 1.919220789832131E-4 2.000343950286342 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 27079 0.9519316524393094 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17944 0.6308010477259489 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11676 0.410456589012939 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 9832 0.3456328522760549 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 9033 0.31754490994808826 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 6837 0.24034701088398977 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6749 0.2372534703021862 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 6118 0.2150713781758446 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 5559 0.19542036470734228 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 5080 0.1785816608586614 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4596 0.1615671876587417 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 4199 0.1476111011703778 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 3846 0.1352017849729157 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3729 0.13108878215392683 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 3533 0.1241986235853643 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 3488 0.12261669942421474 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3395 0.11934738949117232 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 3332 0.11713269566556296 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 2900 0.10194622371852717 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.515387024776799E-5 2 0.0 0.0 0.0 0.0 3.515387024776799E-5 3 0.0 0.0 0.0 3.515387024776799E-5 3.515387024776799E-5 4 0.0 0.0 0.0 3.515387024776799E-5 3.515387024776799E-5 5 0.0 0.0 0.0 3.515387024776799E-5 3.515387024776799E-5 6 0.0 0.0 0.0 3.515387024776799E-5 7.030774049553599E-5 7 0.0 0.0 0.0 3.515387024776799E-5 7.030774049553599E-5 8 0.0 0.0 0.0 3.515387024776799E-5 7.030774049553599E-5 9 0.0 0.0 0.0 7.030774049553599E-5 7.030774049553599E-5 10 0.0 0.0 0.0 1.7576935123883995E-4 7.030774049553599E-5 11 0.0 0.0 0.0 3.515387024776799E-4 7.030774049553599E-5 12 0.0 0.0 0.0 4.570003132209839E-4 7.030774049553599E-5 13 0.0 0.0 0.0 5.624619239642879E-4 7.030774049553599E-5 14 3.515387024776799E-5 0.0 0.0 9.491544966897358E-4 1.0546161074330398E-4 15 3.515387024776799E-5 0.0 0.0 0.0013006931991674158 1.0546161074330398E-4 16 7.030774049553599E-5 0.0 0.0 0.0024256170470959913 1.4061548099107197E-4 17 7.030774049553599E-5 0.0 0.0 0.004464541521466535 1.4061548099107197E-4 18 7.030774049553599E-5 0.0 0.0 0.005624619239642878 1.4061548099107197E-4 19 7.030774049553599E-5 0.0 0.0 0.007944774675995567 1.4061548099107197E-4 20 7.030774049553599E-5 0.0 0.0 0.010405545593339326 1.4061548099107197E-4 21 7.030774049553599E-5 0.0 0.0 0.01662778062719426 1.4061548099107197E-4 22 7.030774049553599E-5 0.0 0.0 0.02576778689161394 1.4061548099107197E-4 23 7.030774049553599E-5 0.0 0.0 0.04309864492376356 1.4061548099107197E-4 24 7.030774049553599E-5 0.0 0.0 0.0800805164244155 1.4061548099107197E-4 25 7.030774049553599E-5 0.0 0.0 0.10405545593339326 1.4061548099107197E-4 26 7.030774049553599E-5 0.0 0.0 0.1305966279704581 1.4061548099107197E-4 27 7.030774049553599E-5 0.0 0.0 0.16982834716696718 1.4061548099107197E-4 28 7.030774049553599E-5 0.0 0.0 0.24287808954182907 1.4061548099107197E-4 29 7.030774049553599E-5 0.0 0.0 0.31525990838198337 1.7576935123883995E-4 30 7.030774049553599E-5 0.0 0.0 0.4159405927715909 1.7576935123883995E-4 31 7.030774049553599E-5 0.0 0.0 0.6331563570325494 1.7576935123883995E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGT 170 0.0 25.029413 4 TCGAACG 185 0.0 23.0 3 ATTCGAA 225 0.0 18.911112 1 TACCGTA 50 0.0070373695 18.5 7 AAGACGG 710 0.0 15.633802 5 CAAGACG 695 0.0 15.4388485 4 GAACGTC 280 0.0 15.196428 5 ACCGTAT 75 0.0041063856 14.8 8 TATCTAG 575 0.0 14.478261 1 GTGCGTA 230 1.8189894E-12 14.478261 15 TAGAGTG 410 0.0 14.439024 5 AGGTTAT 440 0.0 14.295454 1 TTAGAGT 415 0.0 14.26506 4 CTATACT 325 0.0 14.23077 4 TTATCTA 485 0.0 14.113402 4 ATTATAC 435 0.0 14.034483 3 TTATACC 305 0.0 13.95082 4 AACGTCT 320 0.0 13.875001 6 CACTCTA 550 0.0 13.790909 9 GAGTGTT 365 0.0 13.684932 7 >>END_MODULE