##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727110.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4214146 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.420292510036436 31.0 30.0 31.0 27.0 34.0 2 30.813290521970526 31.0 31.0 33.0 27.0 34.0 3 31.122345547591376 31.0 31.0 34.0 28.0 34.0 4 35.02920330714693 35.0 35.0 37.0 32.0 37.0 5 34.73349665626203 35.0 35.0 37.0 32.0 37.0 6 34.630388695598114 35.0 35.0 37.0 31.0 37.0 7 34.475875064603834 35.0 35.0 37.0 30.0 37.0 8 34.475110496883595 35.0 35.0 37.0 30.0 37.0 9 35.819430081444736 37.0 35.0 39.0 30.0 39.0 10 35.60351634708432 37.0 35.0 39.0 30.0 39.0 11 35.64371381532581 37.0 35.0 39.0 30.0 39.0 12 35.24518348438806 37.0 34.0 39.0 29.0 39.0 13 35.51998625581553 37.0 35.0 39.0 30.0 39.0 14 36.212287376849304 38.0 34.0 40.0 30.0 41.0 15 36.24471553667101 38.0 34.0 40.0 30.0 41.0 16 36.09596748665091 38.0 34.0 40.0 29.0 41.0 17 36.04078192829579 38.0 34.0 40.0 29.0 41.0 18 35.98174054719509 38.0 34.0 40.0 29.0 41.0 19 35.966025382129615 38.0 34.0 40.0 28.0 41.0 20 36.40155514308237 38.0 35.0 40.0 30.0 41.0 21 36.509870327226444 38.0 35.0 40.0 30.0 41.0 22 36.49076325310039 38.0 35.0 40.0 30.0 41.0 23 36.38776516048566 38.0 35.0 40.0 30.0 41.0 24 36.26697485089505 38.0 35.0 40.0 29.0 41.0 25 35.98138436589525 38.0 34.0 40.0 28.0 41.0 26 35.75472088532291 38.0 34.0 40.0 27.0 41.0 27 35.59528502334755 38.0 34.0 40.0 27.0 41.0 28 35.3491378798931 38.0 34.0 40.0 27.0 41.0 29 35.17603329357834 38.0 34.0 40.0 26.0 41.0 30 34.86146042400999 38.0 33.0 40.0 25.0 41.0 31 34.704661869807076 38.0 33.0 40.0 25.0 41.0 32 34.50276805786985 37.0 33.0 40.0 24.0 41.0 33 34.451428593124206 37.0 33.0 40.0 24.0 41.0 34 34.20572804074657 37.0 33.0 40.0 24.0 41.0 35 33.84372539537073 37.0 32.0 40.0 23.0 41.0 36 33.744527835532985 37.0 32.0 40.0 22.0 41.0 37 33.538938612947916 37.0 31.0 40.0 21.0 41.0 38 33.48251057272339 37.0 31.0 40.0 21.0 41.0 39 33.294287620789596 37.0 31.0 40.0 19.0 41.0 40 33.04778002470726 36.0 31.0 40.0 18.0 41.0 41 32.87418613403522 36.0 31.0 40.0 17.0 41.0 42 32.67343585153433 36.0 30.0 39.0 15.0 41.0 43 32.527652340474205 36.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 14.0 11 31.0 12 41.0 13 36.0 14 87.0 15 195.0 16 421.0 17 739.0 18 1361.0 19 2892.0 20 5464.0 21 9834.0 22 15925.0 23 25065.0 24 36416.0 25 51191.0 26 68347.0 27 90277.0 28 114804.0 29 143398.0 30 175820.0 31 212737.0 32 250907.0 33 296599.0 34 346316.0 35 399411.0 36 464660.0 37 529130.0 38 589267.0 39 382759.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.32460764292457 23.344634950948542 15.070028423315188 25.260728982811703 2 18.436238326816394 25.69220430426473 31.471999308994043 24.399558059924832 3 19.77686582287372 26.574636948980885 30.430863097766427 23.21763413037897 4 15.925148298136799 17.87197216233135 32.093809754099645 34.10906978543221 5 13.207373451228316 40.754947740301354 32.32697680621412 13.71070200225621 6 33.53979667529317 37.436980114120395 14.570449149127723 14.452774061458715 7 27.40486447313406 33.10694503702529 20.784590756941025 18.70359973289962 8 28.372201627565826 35.838032189677335 19.107904662059642 16.681861520697193 9 28.24251936216733 14.47591042170822 18.881761571620917 38.39980864450354 10 17.46270774671784 29.67963141286514 31.46355157130294 21.394109269114075 11 35.47867112340199 23.57981901908477 19.66794695769914 21.273562899814102 12 21.087926237012198 29.153190231188002 28.693239389427895 21.065644142371905 13 30.29928246434746 20.57550924908629 25.358138991862173 23.767069294704076 14 22.66857863965795 22.325757104760964 25.516723910372352 29.488940345208732 15 26.05220606974699 28.655438136220248 21.79672939665593 23.495626397376835 16 23.360201568716413 27.043059258032354 25.54016875542518 24.056570417826055 17 23.435187105525056 28.76428581259406 25.284719608670414 22.515807473210465 18 23.87342536305102 25.429849843835502 27.08831160572035 23.60841318739313 19 24.63312851524366 27.15805290087244 26.3776338076564 21.831184776227495 20 23.885622377582553 25.824496825691373 27.103332442682337 23.186548354043737 21 24.098049759073366 27.33089930913642 26.354995769012273 22.21605516277794 22 24.017274199802287 26.94526957537779 25.17067514984056 23.866781074979368 23 22.667843022050018 26.783362512831783 26.19757360091463 24.351220864203565 24 22.819285330883172 28.427610244163347 25.805299579084352 22.947804845869126 25 23.62519001477405 27.13890311346593 25.09417091861554 24.14173595314448 26 23.575974823843314 27.268419271662637 26.074867837991373 23.08073806650268 27 24.055644963416075 27.37968736726255 25.152972868049662 23.411694801271718 28 22.99455215837325 27.567886826892092 26.4928410168988 22.94471999783586 29 23.308684606560856 27.26101563638279 26.606102398920207 22.824197358136146 30 23.027821057932023 28.22780701000867 26.5893730307398 22.15499890131951 31 23.848105879577975 27.347201544512224 25.45149123926888 23.35320133664092 32 21.757148423429086 28.254502810296557 26.081583314863792 23.906765451410557 33 22.498128921019823 27.461198544141563 26.680637073323993 23.360035461514624 34 22.491674469750215 27.628444766745147 26.690840801434028 23.189039962070606 35 22.924217623214762 28.147126369138608 26.633913490420124 22.294742517226503 36 23.104254100356275 27.768710433857773 26.05953851622606 23.06749694955989 37 22.5943524500575 27.733139763074178 26.59786822763141 23.07463955923691 38 22.850560944020447 27.11344125239135 27.001437539183502 23.034560264404696 39 22.929105920867478 26.326567707905706 26.909224312589075 23.83510205863774 40 22.80910533237339 27.07734853040213 27.347818514118877 22.765727623105604 41 21.759473924254166 27.299030455992746 27.50690175423443 23.43459386551866 42 22.76138510625878 27.569619087710773 27.45645262409038 22.212543181940067 43 22.30262074451146 26.337649431225213 27.57042589411947 23.789303930143856 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 969.0 1 1427.5 2 1886.0 3 1911.0 4 1936.0 5 1936.0 6 2520.0 7 3104.0 8 4877.5 9 6651.0 10 11210.5 11 15770.0 12 15770.0 13 32722.0 14 49674.0 15 62615.0 16 75556.0 17 59414.0 18 43272.0 19 43272.0 20 49383.5 21 55495.0 22 50561.5 23 45628.0 24 50441.5 25 55255.0 26 55255.0 27 62524.5 28 69794.0 29 75887.5 30 81981.0 31 89343.5 32 96706.0 33 96706.0 34 111935.5 35 127165.0 36 145971.0 37 164777.0 38 184945.0 39 205113.0 40 205113.0 41 219117.0 42 233121.0 43 248757.5 44 264394.0 45 294601.5 46 324809.0 47 324809.0 48 384183.0 49 443557.0 50 430801.0 51 418045.0 52 361632.5 53 305220.0 54 305220.0 55 283322.0 56 261424.0 57 247578.5 58 233733.0 59 215262.5 60 196792.0 61 196792.0 62 167537.5 63 138283.0 64 118527.0 65 98771.0 66 83462.5 67 68154.0 68 68154.0 69 55780.5 70 43407.0 71 38463.5 72 33520.0 73 26508.0 74 19496.0 75 19496.0 76 15091.5 77 10687.0 78 9107.5 79 7528.0 80 5927.0 81 4326.0 82 4326.0 83 3651.0 84 2976.0 85 2415.5 86 1855.0 87 1810.5 88 1766.0 89 1766.0 90 1218.0 91 670.0 92 552.0 93 434.0 94 370.5 95 307.0 96 307.0 97 183.0 98 59.0 99 69.5 100 80.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4214146.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.98592919948608 #Duplication Level Percentage of deduplicated Percentage of total 1 84.46354233535045 43.909157317833234 2 7.982279190689627 8.299324017154442 3 2.692849663321577 4.199708758268863 4 1.3065151074289605 2.716816074914435 5 0.7762122962114795 2.017605873731025 6 0.5102602289472135 1.591581128121804 7 0.35441537633771536 1.289722886305118 8 0.2737947391765695 1.138677914081992 9 0.21112824379932832 0.9878128140747346 >10 1.2587517761721063 12.033350184420497 >50 0.09213222765950374 3.3066358875712965 >100 0.06310862984325484 6.61563963786996 >500 0.008656180404252124 3.0913774328257317 >1k 0.005801482514067889 5.3641624761476026 >5k 3.223045841148823E-4 1.1728712303326256 >10k+ 2.3021756008205884E-4 2.2655563663465923 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 34041 0.8077793223110922 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21602 0.5126068247279519 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 14669 0.34808950615379725 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 12451 0.29545725278621104 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 11887 0.2820737582418834 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 8421 0.19982696375493397 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8345 0.19802351413548558 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 7574 0.17972799233818668 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 7131 0.16921577942482297 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 6195 0.14700487358530057 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 5780 0.13715708947910205 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5554 0.13179419982126866 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 4894 0.11613266365237465 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4537 0.10766119636101835 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 4440 0.10535942513619605 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 4367 0.10362716431751534 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 4221 0.10016264268015394 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4217 0.10006772427913033 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 2.3729600255900008E-5 0.0 5 0.0 0.0 0.0 2.3729600255900008E-5 0.0 6 2.3729600255900008E-5 0.0 0.0 2.3729600255900008E-5 4.7459200511800015E-5 7 2.3729600255900008E-5 0.0 0.0 2.3729600255900008E-5 4.7459200511800015E-5 8 2.3729600255900008E-5 0.0 0.0 4.7459200511800015E-5 4.7459200511800015E-5 9 2.3729600255900008E-5 0.0 0.0 9.491840102360003E-5 7.118880076770003E-5 10 4.7459200511800015E-5 0.0 0.0 1.1864800127950004E-4 7.118880076770003E-5 11 4.7459200511800015E-5 0.0 0.0 1.6610720179130006E-4 7.118880076770003E-5 12 4.7459200511800015E-5 0.0 0.0 2.135664023031001E-4 7.118880076770003E-5 13 4.7459200511800015E-5 0.0 0.0 2.135664023031001E-4 7.118880076770003E-5 14 4.7459200511800015E-5 0.0 0.0 5.220512056298002E-4 9.491840102360003E-5 15 4.7459200511800015E-5 0.0 0.0 8.542656092124004E-4 9.491840102360003E-5 16 4.7459200511800015E-5 0.0 0.0 0.0019695568212397007 1.1864800127950004E-4 17 4.7459200511800015E-5 0.0 0.0 0.003488251237617301 1.1864800127950004E-4 18 4.7459200511800015E-5 0.0 0.0 0.0042238688455502015 1.1864800127950004E-4 19 4.7459200511800015E-5 0.0 0.0 0.006051048065254502 1.1864800127950004E-4 20 4.7459200511800015E-5 0.0 0.0 0.007664660882655703 1.1864800127950004E-4 21 4.7459200511800015E-5 0.0 0.0 0.011437667323343805 1.4237760153540006E-4 22 4.7459200511800015E-5 0.0 0.0 0.018200603396275307 1.4237760153540006E-4 23 4.7459200511800015E-5 0.0 0.0 0.031346801938043914 2.135664023031001E-4 24 4.7459200511800015E-5 0.0 0.0 0.05619169340597122 2.135664023031001E-4 25 4.7459200511800015E-5 0.0 0.0 0.07218544397844782 2.135664023031001E-4 26 4.7459200511800015E-5 0.0 0.0 0.09059961377702623 2.135664023031001E-4 27 4.7459200511800015E-5 0.0 0.0 0.11914632288487395 2.135664023031001E-4 28 4.7459200511800015E-5 0.0 0.0 0.17346337787062907 2.135664023031001E-4 29 4.7459200511800015E-5 0.0 0.0 0.23131614329451328 2.135664023031001E-4 30 4.7459200511800015E-5 0.0 0.0 0.3158409794060291 2.135664023031001E-4 31 4.7459200511800015E-5 0.0 0.0 0.5122983399246253 2.135664023031001E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGT 360 0.0 18.5 4 TCGAACG 365 0.0 17.739725 3 AGTCGCG 75 2.0689146E-4 17.266666 34 ACGAACG 440 0.0 16.397728 15 AAGACGG 1150 0.0 16.247826 5 CGAACGA 440 0.0 15.977273 16 CGATAAC 435 0.0 15.310344 10 TATCTAG 1085 0.0 15.175116 1 GTATTAG 1030 0.0 14.907767 1 AGGTTAT 615 0.0 14.739838 1 CAAGACG 1275 0.0 14.654902 4 CCGATAA 455 0.0 14.6373625 9 GGTTATC 635 0.0 14.566929 2 TAGAGTG 615 0.0 14.439024 5 ATTCGAA 475 0.0 14.410526 1 CGCTTCG 760 0.0 14.361842 32 CACTCTA 840 0.0 14.315475 9 TAGAGTC 1245 0.0 14.26506 5 CTAGAGT 1350 0.0 14.251852 4 AACGAAC 500 0.0 14.059999 14 >>END_MODULE