##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727109.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1349570 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.970048978563543 31.0 30.0 31.0 27.0 34.0 2 30.417893106693242 31.0 30.0 31.0 27.0 34.0 3 30.722747986395667 31.0 30.0 34.0 27.0 34.0 4 34.649603947924156 35.0 35.0 37.0 32.0 37.0 5 34.315199656186785 35.0 35.0 37.0 30.0 37.0 6 34.26648784427633 35.0 35.0 37.0 30.0 37.0 7 34.11469356906274 35.0 35.0 37.0 30.0 37.0 8 34.11078565765392 35.0 33.0 37.0 30.0 37.0 9 35.39537185918478 37.0 34.0 39.0 30.0 39.0 10 35.216038441874076 37.0 34.0 39.0 29.0 39.0 11 35.25640463258667 37.0 34.0 39.0 30.0 39.0 12 35.05469816311862 37.0 34.0 39.0 29.0 39.0 13 35.21707729128537 37.0 34.0 39.0 30.0 39.0 14 35.83975933074979 38.0 34.0 40.0 28.0 41.0 15 35.905849270508384 38.0 34.0 40.0 29.0 41.0 16 35.701305601043295 38.0 34.0 40.0 27.0 41.0 17 35.732952718273225 38.0 34.0 40.0 27.0 41.0 18 35.61611105759612 38.0 33.0 40.0 27.0 41.0 19 35.597745207732835 38.0 34.0 40.0 27.0 41.0 20 36.01243877679557 38.0 34.0 40.0 29.0 41.0 21 36.089017983505855 38.0 34.0 40.0 29.0 41.0 22 36.07530694962099 38.0 34.0 40.0 29.0 41.0 23 35.95832450336033 38.0 34.0 40.0 28.0 41.0 24 35.82402468934549 38.0 34.0 40.0 27.0 41.0 25 35.526346169520664 38.0 34.0 40.0 27.0 41.0 26 35.27568632971984 38.0 34.0 40.0 27.0 41.0 27 35.08808212986359 38.0 33.0 40.0 26.0 41.0 28 34.824987959127725 38.0 33.0 40.0 25.0 41.0 29 34.65486340093511 37.0 33.0 40.0 25.0 41.0 30 34.29938276636262 37.0 33.0 40.0 24.0 41.0 31 34.118848225731156 37.0 32.0 40.0 24.0 41.0 32 33.920447994546414 37.0 32.0 40.0 24.0 41.0 33 33.8577813673985 37.0 32.0 40.0 24.0 41.0 34 33.64726913016739 36.0 31.0 39.0 23.0 40.0 35 33.232681520780694 36.0 31.0 39.0 20.0 40.0 36 33.232848240550695 36.0 31.0 39.0 20.0 40.0 37 33.049132686707615 36.0 31.0 39.0 19.0 40.0 38 32.94260023563061 36.0 31.0 39.0 19.0 40.0 39 32.77901109242203 36.0 30.0 39.0 18.0 40.0 40 32.53497262090888 35.0 30.0 39.0 16.0 40.0 41 32.28370666212201 35.0 30.0 39.0 15.0 40.0 42 32.04616062894107 35.0 30.0 39.0 15.0 40.0 43 31.83874863845521 35.0 30.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 4.0 11 7.0 12 8.0 13 16.0 14 40.0 15 76.0 16 157.0 17 312.0 18 646.0 19 1219.0 20 2347.0 21 4093.0 22 6548.0 23 9932.0 24 14245.0 25 19666.0 26 25911.0 27 33827.0 28 42510.0 29 51971.0 30 62179.0 31 73623.0 32 86313.0 33 100902.0 34 115399.0 35 131750.0 36 151173.0 37 168285.0 38 171713.0 39 74698.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.29670191246101 25.881577094926534 16.2630319286884 23.558689063924064 2 19.542520951117766 27.924227716976517 28.926843364923645 23.606407966982076 3 21.67594122572375 26.896122468638158 30.379083708144076 21.048852597494015 4 18.144964692457595 19.15069244277807 30.442807709122167 32.26153515564217 5 13.72703898278711 41.24684158657943 31.523966893158562 13.502152537474899 6 33.6705765540135 37.57930303726372 13.923620116036961 14.826500292685818 7 26.294671636150774 33.76512518802286 20.80499714723949 19.135206028586882 8 28.232251754262467 36.30912068288418 19.47901924316634 15.97960831968701 9 28.149706943693175 14.42459450047052 19.135057833235773 38.290640722600536 10 17.644731284779596 30.43895462999326 31.58880235926999 20.327511725957155 11 35.069614766184785 23.695621568351402 19.39410330697926 21.840660358484556 12 20.342257163392784 30.44177034166438 28.874308112954495 20.341664381988338 13 30.553880124780484 20.88939439969768 25.872537178508708 22.684188297013122 14 22.520802922412326 22.42121564646517 26.374178442022274 28.683802989100233 15 26.183376927465783 28.956704728172678 22.04731877561001 22.81259956875153 16 22.557555369488057 27.520617678223434 26.32379202264425 23.598034929644257 17 22.835347555147194 29.989404032395505 25.85979237831309 21.31545603414421 18 23.127440592188623 25.768800432730426 28.04270990019043 23.061049074890523 19 24.238016553420717 28.32946790459183 26.645227739205822 20.787287802781627 20 23.436798387634582 26.299339789710796 28.04848951888379 22.21537230377083 21 23.28741747371385 28.463362404321373 26.853738598220172 21.3954815237446 22 23.539942352008417 28.228324577458004 25.459516734960026 22.772216335573553 23 22.147276539934943 27.600643167823826 26.87648658461584 23.37559370762539 24 22.14186740961936 29.665374897189473 26.343872492719907 21.848885200471262 25 23.037856502441517 28.24655260564476 25.58607556480953 23.129515327104187 26 22.75628533532903 28.351623109583052 26.75289166178857 22.139199893299345 27 23.625302874248835 28.429351571241213 25.624161770045273 22.321183784464683 28 22.270352779033324 28.667279207451262 27.331816800906957 21.73055121260846 29 22.69589572975096 28.069533258741675 27.192587268537388 22.041983742969983 30 22.244714983290976 29.323784612876697 27.35789918270264 21.073601221129692 31 23.11862296879747 28.613558392673223 25.830968382521842 22.436850256007467 32 20.737790555510273 29.650703557429402 26.567647472898777 23.043858414161548 33 21.85673955408019 28.594367094704236 27.35330512681817 22.1955882243974 34 21.43504968249146 28.91780344850582 27.121083011625924 22.526063857376794 35 21.77841831101758 29.619360240669252 27.341301303378113 21.260920144935053 36 22.53888275524797 29.06955548804434 26.146402187363382 22.24515956934431 37 21.46646709692717 29.2155279088895 27.063435020043418 22.254569974139912 38 22.22952495980201 28.41631038034337 27.43592403506302 21.9182406247916 39 22.13097505131264 27.391391332053917 27.29750957712457 23.180124039508883 40 21.932467378498334 28.42572078513897 27.681631927206446 21.96017990915625 41 21.08530865386753 28.430314841023435 27.689412183139815 22.794964321969218 42 21.87815378231585 29.036656120097515 27.672740206139736 21.412449891446904 43 21.66556755114592 27.56626184636588 27.95438547092778 22.813785131560422 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 465.0 1 625.5 2 786.0 3 837.5 4 889.0 5 889.0 6 1093.5 7 1298.0 8 2078.0 9 2858.0 10 4600.0 11 6342.0 12 6342.0 13 13815.0 14 21288.0 15 26605.0 16 31922.0 17 24852.0 18 17782.0 19 17782.0 20 19892.5 21 22003.0 22 20292.5 23 18582.0 24 19225.5 25 19869.0 26 19869.0 27 22047.0 28 24225.0 29 25924.5 30 27624.0 31 29797.5 32 31971.0 33 31971.0 34 36647.0 35 41323.0 36 46765.5 37 52208.0 38 57930.0 39 63652.0 40 63652.0 41 68530.5 42 73409.0 43 78714.0 44 84019.0 45 95585.5 46 107152.0 47 107152.0 48 131284.5 49 155417.0 50 148638.5 51 141860.0 52 117969.0 53 94078.0 54 94078.0 55 84726.5 56 75375.0 57 70370.5 58 65366.0 59 59273.5 60 53181.0 61 53181.0 62 45245.0 63 37309.0 64 31821.5 65 26334.0 66 22144.0 67 17954.0 68 17954.0 69 14672.5 70 11391.0 71 9966.0 72 8541.0 73 6841.0 74 5141.0 75 5141.0 76 3996.5 77 2852.0 78 2439.5 79 2027.0 80 1558.0 81 1089.0 82 1089.0 83 904.0 84 719.0 85 601.5 86 484.0 87 443.5 88 403.0 89 403.0 90 293.5 91 184.0 92 141.5 93 99.0 94 86.0 95 73.0 96 73.0 97 44.5 98 16.0 99 13.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1349570.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.566270318496905 #Duplication Level Percentage of deduplicated Percentage of total 1 87.18836765937719 51.93485876626954 2 6.82189657686815 8.127098711651138 3 2.260892663434249 4.040188306536927 4 1.092106820851395 2.6021092043003393 5 0.6128851458965036 1.8253641137331273 6 0.39409627163169414 1.4084907028515166 7 0.2901329944218483 1.209749826183274 8 0.2170687201527275 1.0343979249846018 9 0.15450879119022928 0.8283161180359253 >10 0.8300351764101698 8.90332771463275 >50 0.07231705776571622 2.9850224874081026 >100 0.05641501314216428 6.569337348954135 >500 0.005516118780465621 2.295915173923242 >1k 0.00351025740575085 4.533284324221315 >5k 1.2536633591967323E-4 0.696428847357559 >10k+ 1.2536633591967323E-4 1.006110428956508 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13473 0.9983179827648807 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9326 0.6910349222344895 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 4984 0.36930281497069434 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 4912 0.3639677823306683 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 4023 0.2980949487614573 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 3988 0.2955015301170002 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 3888 0.28809176256140845 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 3447 0.2554146876412487 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 3186 0.23607519432115415 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 2569 0.19035692850315283 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2311 0.17123972820972605 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2192 0.16242210481857183 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1958 0.14508324873848708 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 1955 0.1448609557118193 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 1758 0.13026371362730352 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 1658 0.12285394607171173 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 1641 0.12159428558726113 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1606 0.11900086694280401 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 1563 0.11581466689389955 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 1535 0.11373993197833383 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 1476 0.10936816912053468 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 7.409767555591781E-5 0.0 13 0.0 0.0 0.0 1.4819535111183562E-4 0.0 14 0.0 0.0 0.0 4.4458605333550687E-4 7.409767555591781E-5 15 0.0 0.0 0.0 8.891721066710137E-4 7.409767555591781E-5 16 0.0 0.0 0.0 0.002297027942233452 7.409767555591781E-5 17 0.0 0.0 0.0 0.004519958208910987 7.409767555591781E-5 18 0.0 0.0 0.0 0.005631423342249754 7.409767555591781E-5 19 0.0 0.0 0.0 0.008002548960039123 7.409767555591781E-5 20 0.0 0.0 0.0 0.01015138155116074 7.409767555591781E-5 21 0.0 0.0 0.0 0.016079195595634165 7.409767555591781E-5 22 0.0 0.0 0.0 0.026971553902354083 7.409767555591781E-5 23 0.0 0.0 0.0 0.04431040998243885 1.4819535111183562E-4 24 0.0 0.0 0.0 0.07728387560482228 1.4819535111183562E-4 25 0.0 0.0 0.0 0.10040235037826864 1.4819535111183562E-4 26 0.0 0.0 0.0 0.12789258800951414 1.4819535111183562E-4 27 0.0 0.0 0.0 0.16694206302748282 1.4819535111183562E-4 28 0.0 0.0 0.0 0.23229621286780233 1.4819535111183562E-4 29 0.0 0.0 0.0 0.29987329297479937 1.4819535111183562E-4 30 0.0 0.0 0.0 0.39612617352193663 1.4819535111183562E-4 31 0.0 0.0 0.0 0.5919663300162273 1.4819535111183562E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAGAG 200 0.0 18.5 3 GTAGGAC 110 3.8531653E-8 18.5 3 TCGGTAA 50 0.0070355004 18.5 22 TAGGACT 155 2.1827873E-11 17.903227 4 GTATTAG 255 0.0 17.411764 1 TAGAGTG 195 0.0 17.076921 5 CTAGGAC 210 0.0 16.738094 3 TTAGAGT 190 1.8189894E-12 16.552631 4 CGATGCG 195 1.8189894E-12 16.128204 33 TATTAGC 340 0.0 15.779413 2 TTTAGAC 120 1.9360104E-6 15.416666 3 GGAGTGT 325 0.0 15.369231 6 TAAGACA 205 5.456968E-12 15.341464 4 GTACCGT 85 5.365008E-4 15.235295 6 CTATTCA 85 5.365008E-4 15.235295 4 TTAGCTC 305 0.0 15.163934 4 TGCGGCG 220 1.8189894E-12 15.136364 36 TACACCG 135 3.9733277E-7 15.074073 5 ATTAGCT 320 0.0 15.03125 3 TACTTAC 235 0.0 14.957447 31 >>END_MODULE