##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727108.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3351749 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.39509133888009 31.0 30.0 31.0 27.0 34.0 2 30.7775934295796 31.0 31.0 33.0 27.0 34.0 3 31.11390560570019 31.0 31.0 34.0 28.0 34.0 4 35.014987995819496 35.0 35.0 37.0 32.0 37.0 5 34.72350256537706 35.0 35.0 37.0 32.0 37.0 6 34.63961203538809 35.0 35.0 37.0 31.0 37.0 7 34.45162689688279 35.0 35.0 37.0 30.0 37.0 8 34.4839852268174 35.0 35.0 37.0 30.0 37.0 9 35.811122789922514 37.0 35.0 39.0 30.0 39.0 10 35.66420098879719 37.0 35.0 39.0 30.0 39.0 11 35.65992023865749 37.0 35.0 39.0 30.0 39.0 12 35.49608189634725 37.0 35.0 39.0 30.0 39.0 13 35.60383071644088 37.0 35.0 39.0 30.0 39.0 14 36.31406856539675 38.0 35.0 40.0 30.0 41.0 15 36.33547112268848 38.0 35.0 40.0 30.0 41.0 16 36.138858548178874 38.0 34.0 40.0 29.0 41.0 17 36.17981686576173 38.0 34.0 40.0 30.0 41.0 18 36.06178595115565 38.0 34.0 40.0 29.0 41.0 19 35.9823483202352 38.0 34.0 40.0 28.0 41.0 20 36.468857900755694 38.0 35.0 40.0 30.0 41.0 21 36.556441129690796 38.0 35.0 40.0 30.0 41.0 22 36.56377849295995 38.0 35.0 40.0 30.0 41.0 23 36.46972699924726 38.0 35.0 40.0 30.0 41.0 24 36.328505803984726 38.0 35.0 40.0 30.0 41.0 25 36.026875222458486 38.0 34.0 40.0 28.0 41.0 26 35.780531597085584 38.0 34.0 40.0 27.0 41.0 27 35.59666520374885 38.0 34.0 40.0 27.0 41.0 28 35.32501986276419 38.0 34.0 40.0 27.0 41.0 29 35.13917181746008 38.0 34.0 40.0 26.0 41.0 30 34.786589329928944 38.0 33.0 40.0 25.0 41.0 31 34.62754907959994 37.0 33.0 40.0 25.0 41.0 32 34.37171578182018 37.0 33.0 40.0 24.0 41.0 33 34.328059469846934 37.0 33.0 40.0 24.0 41.0 34 34.111142868991685 37.0 33.0 40.0 24.0 41.0 35 33.7140382528644 37.0 32.0 40.0 22.0 41.0 36 33.706469965382254 37.0 32.0 40.0 22.0 41.0 37 33.521835316427335 37.0 31.0 40.0 21.0 41.0 38 33.38001861117882 37.0 31.0 40.0 20.0 41.0 39 33.21171454067712 36.0 31.0 40.0 19.0 41.0 40 32.955875275863434 36.0 31.0 40.0 18.0 41.0 41 32.70870670805004 36.0 30.0 39.0 15.0 41.0 42 32.47971641074555 36.0 30.0 39.0 15.0 41.0 43 32.25901492026998 36.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 6.0 11 37.0 12 24.0 13 39.0 14 73.0 15 169.0 16 320.0 17 682.0 18 1243.0 19 2436.0 20 4630.0 21 8029.0 22 13151.0 23 20493.0 24 29680.0 25 41240.0 26 55509.0 27 71920.0 28 91267.0 29 112896.0 30 137823.0 31 166923.0 32 198875.0 33 235456.0 34 276435.0 35 317746.0 36 370750.0 37 427553.0 38 470501.0 39 295840.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.02147744356753 23.04238772056022 14.997035875896437 24.939098959975823 2 17.93908195392913 26.58588098333139 30.670435047493115 24.804602015246367 3 20.360862343809156 27.008705007445364 30.340637082311357 22.28979556643412 4 16.230690305270475 18.20935875568248 30.94554514672787 34.614405792319175 5 13.232703284165966 41.19962443488459 31.730597965420444 13.837074315528996 6 33.560746941373 36.36829607467624 14.894552068188876 15.176404915761891 7 26.888170922106635 33.24738815466194 20.814058570614925 19.0503823526165 8 29.07434297735302 35.014614757847326 19.641148546624464 16.269893718175197 9 28.804573373483517 14.288390926647551 18.97191585646777 37.93511984340116 10 18.172422815670267 29.84955019006495 30.84291216317212 21.135114831092665 11 34.874508801225865 23.826276967636897 19.279874477474298 22.01933975366294 12 21.26006452153786 29.954331305834653 28.146916729146483 20.638687443481 13 30.655905319879263 20.30751706049588 25.50960707379938 23.526970545825478 14 22.95640276166264 22.671268045429414 25.6443128647163 28.728016328191643 15 26.99757648917028 27.95119801631924 21.896836547128082 23.154388947382394 16 22.88572324478951 26.800604699218226 26.593488951589155 23.7201831044031 17 23.67486348172253 29.114143093650508 25.423502774223252 21.787490650403715 18 24.18322493718951 24.673864301891342 27.793936837155762 23.34897392376338 19 24.72795546444558 27.74775199455568 26.534594326723155 20.98969821427559 20 23.754881406692448 25.520914603092297 27.787641616362084 22.93656237385317 21 23.730356897249763 27.791550023584698 26.827158000196317 21.65093507896922 22 23.931207259254794 27.322421816192083 24.713724088528107 24.032646836025013 23 22.009195795985917 26.996114565858004 26.382971994621318 24.611717643534764 24 22.207838355437715 29.46431847969523 25.88532136505448 22.442521799812575 25 23.421443550814814 27.37003874693481 24.641314131815957 24.56720357043442 26 23.3392476584613 27.485739534792135 26.40967447144759 22.765338335298974 27 24.18092762912736 27.45262249649362 24.945573191787332 23.420876682591686 28 22.628335236319906 28.12227287902525 26.71106935513369 22.538322529521153 29 23.11772152389693 27.220415371198737 27.077952436175863 22.58391066872848 30 22.451800537570087 28.996890876971992 27.128284367355672 21.423024218102253 31 24.02918595634697 27.66125983777425 25.018042818838758 23.29151138704002 32 20.79287560017173 29.01219631899644 26.15524014477218 24.03968793605965 33 22.004272992995595 27.956508676514858 26.93444527021564 23.104773060273907 34 21.75759581042614 28.17558832716889 26.82432365908068 23.242492203324293 35 22.170425052711288 29.07288105404074 27.171992890875778 21.584701002372196 36 23.037614093418092 28.287350872633958 25.96871066419353 22.70632436975442 37 22.06492789287026 28.539428220907947 26.702059133902928 22.693584752318863 38 22.68296343192763 27.771590295096683 27.167517615430032 22.377928657545656 39 22.81507356308602 26.32007945702378 26.929761148582426 23.935085831307774 40 22.459468176167128 27.690349128171594 27.460439310938856 22.389743384722426 41 21.236256056166496 27.911934933075237 27.53365481723124 23.318154193527022 42 22.574124733087114 28.38607544896709 27.540278224890947 21.499521593054848 43 22.18143423030782 26.58919268716124 27.613463896013695 23.615909186517246 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 929.0 1 1410.0 2 1891.0 3 1940.5 4 1990.0 5 1990.0 6 2594.0 7 3198.0 8 4913.0 9 6628.0 10 11126.5 11 15625.0 12 15625.0 13 32428.0 14 49231.0 15 61291.5 16 73352.0 17 56908.5 18 40465.0 19 40465.0 20 45238.0 21 50011.0 22 44429.5 23 38848.0 24 42013.0 25 45178.0 26 45178.0 27 49553.5 28 53929.0 29 56943.0 30 59957.0 31 64430.5 32 68904.0 33 68904.0 34 80054.5 35 91205.0 36 105365.5 37 119526.0 38 134688.5 39 149851.0 40 149851.0 41 160102.0 42 170353.0 43 183078.5 44 195804.0 45 225620.0 46 255436.0 47 255436.0 48 329717.5 49 403999.0 50 392753.0 51 381507.0 52 307336.5 53 233166.0 54 233166.0 55 211093.5 56 189021.0 57 179876.0 58 170731.0 59 158630.5 60 146530.0 61 146530.0 62 124418.0 63 102306.0 64 88882.0 65 75458.0 66 64298.5 67 53139.0 68 53139.0 69 43635.5 70 34132.0 71 30858.5 72 27585.0 73 21879.0 74 16173.0 75 16173.0 76 12369.0 77 8565.0 78 7465.0 79 6365.0 80 4956.5 81 3548.0 82 3548.0 83 3017.5 84 2487.0 85 2073.5 86 1660.0 87 1640.0 88 1620.0 89 1620.0 90 1143.0 91 666.0 92 522.0 93 378.0 94 331.5 95 285.0 96 285.0 97 170.0 98 55.0 99 58.5 100 62.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3351749.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.8016628517028 #Duplication Level Percentage of deduplicated Percentage of total 1 84.18788467392933 40.24320879381208 2 8.099584292585979 7.743471951862854 3 2.78978591841482 4.000692177014798 4 1.3408915241878852 2.5638737823974074 5 0.7889287662092964 1.8856053448173327 6 0.5281648139668876 1.5148293820426497 7 0.3591130041752638 1.2016339125873672 8 0.26824427959021596 1.0258018091895524 9 0.21471268164617144 0.9237260896231755 >10 1.224343355102173 10.596460122082792 >50 0.09597751606326994 3.1803097938217118 >100 0.08160467772821126 8.23640441257042 >500 0.011542801624512834 3.8102679552990737 >1k 0.008155240278111845 7.135642331477713 >5k 6.273261752393728E-4 2.0688492834430687 >10k+ 4.391283226675609E-4 3.8692228579579324 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 33152 0.989095543848898 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21906 0.6535692260965842 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 19283 0.5753115761353251 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 17698 0.5280228322586208 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13714 0.4091595164196364 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 12876 0.3841576442627416 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 10400 0.3102857642383126 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 9488 0.28307608952818364 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 9266 0.2764526818684812 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 8376 0.24989938089039482 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7787 0.23232646597343654 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 6567 0.19592755901471143 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 6147 0.18339678776662574 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 5500 0.16409343301064608 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5402 0.16116958638609274 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 5365 0.16006568510947566 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 5093 0.15195051896785827 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 4875 0.14544645198670902 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4598 0.13718210999690011 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4432 0.13222947183694245 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 3784 0.1128962819113245 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGT 3691 0.11012161113496267 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 3644 0.10871935816196261 No Hit CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT 3548 0.10585518187668588 No Hit CATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGT 3462 0.10328935728779214 No Hit CCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCA 3449 0.10290150008249424 No Hit ATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTC 3392 0.10120089541311118 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATC 3372 0.10060419202034519 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.983516963829929E-5 2 0.0 0.0 0.0 0.0 2.983516963829929E-5 3 0.0 0.0 0.0 0.0 2.983516963829929E-5 4 0.0 0.0 0.0 2.983516963829929E-5 2.983516963829929E-5 5 2.983516963829929E-5 0.0 0.0 2.983516963829929E-5 2.983516963829929E-5 6 2.983516963829929E-5 0.0 0.0 2.983516963829929E-5 2.983516963829929E-5 7 2.983516963829929E-5 0.0 0.0 2.983516963829929E-5 2.983516963829929E-5 8 5.967033927659858E-5 0.0 0.0 2.983516963829929E-5 2.983516963829929E-5 9 5.967033927659858E-5 0.0 0.0 1.4917584819149643E-4 8.950550891489786E-5 10 5.967033927659858E-5 2.983516963829929E-5 0.0 2.0884618746809503E-4 8.950550891489786E-5 11 5.967033927659858E-5 2.983516963829929E-5 0.0 2.685165267446936E-4 8.950550891489786E-5 12 5.967033927659858E-5 2.983516963829929E-5 0.0 3.2818686602129217E-4 8.950550891489786E-5 13 5.967033927659858E-5 5.967033927659858E-5 0.0 3.8785720529789074E-4 8.950550891489786E-5 14 1.1934067855319716E-4 5.967033927659858E-5 0.0 5.370330534893872E-4 1.1934067855319716E-4 15 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.0010442309373404751 1.1934067855319716E-4 16 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.0022376377228724466 1.4917584819149643E-4 17 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.003968077561893805 1.4917584819149643E-4 18 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.004952638159957682 1.7901101782979572E-4 19 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.0075781330881280196 1.7901101782979572E-4 20 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.010322968694851553 1.7901101782979572E-4 21 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.017453574238405083 1.7901101782979572E-4 22 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.027388685727958745 2.0884618746809503E-4 23 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.04564780954659791 3.5802203565959143E-4 24 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.08097265039834427 3.5802203565959143E-4 25 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.10531814882319648 3.5802203565959143E-4 26 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.13330353794392122 3.8785720529789074E-4 27 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.17289480805394436 3.8785720529789074E-4 28 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.24190355542733064 3.8785720529789074E-4 29 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.3139256549341851 3.8785720529789074E-4 30 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.4128292422851472 3.8785720529789074E-4 31 1.1934067855319716E-4 5.967033927659858E-5 0.0 0.6336393327782003 3.8785720529789074E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1000 0.0 19.055 5 GTAATAC 170 0.0 18.5 3 CAAGACG 1025 0.0 18.409758 4 GGTTATC 445 0.0 18.292133 2 CGAACGT 310 0.0 17.903225 4 ATTAGAG 620 0.0 17.604837 3 TTAGAGT 565 0.0 17.353983 4 TATACCG 120 1.04293576E-7 16.958334 5 ATTCGAA 340 0.0 16.867647 1 TAGAGTG 565 0.0 16.371681 5 TCGAACG 355 0.0 16.15493 3 GGTCGTA 70 0.0025938842 15.857142 29 TATCTAG 950 0.0 15.7736845 1 AGGTTAT 540 0.0 15.759259 1 TCGTTAC 250 0.0 15.54 23 GTTCGAC 120 1.9380968E-6 15.416667 11 ACGGACC 1125 0.0 15.293332 8 CACTCTA 690 0.0 15.282609 9 ACGAACG 475 0.0 15.189473 15 GACGGAC 1145 0.0 15.187774 7 >>END_MODULE