##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727102.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1166022 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.007322331825645 31.0 30.0 31.0 27.0 34.0 2 30.434954057470613 31.0 30.0 31.0 27.0 34.0 3 30.736279418398624 31.0 30.0 34.0 27.0 34.0 4 34.657741449132175 35.0 35.0 37.0 32.0 37.0 5 34.31698458519651 35.0 35.0 37.0 30.0 37.0 6 34.2796791141162 35.0 35.0 37.0 30.0 37.0 7 34.10143033321841 35.0 35.0 37.0 30.0 37.0 8 34.12092138913331 35.0 33.0 37.0 30.0 37.0 9 35.388572428307526 37.0 34.0 39.0 30.0 39.0 10 35.21298654742363 37.0 34.0 39.0 29.0 39.0 11 35.281613039891184 37.0 34.0 39.0 30.0 39.0 12 35.08043415990436 37.0 34.0 39.0 29.0 39.0 13 35.24485215544818 37.0 34.0 39.0 30.0 39.0 14 35.83984007162815 38.0 34.0 40.0 28.0 41.0 15 35.92533159751703 38.0 34.0 40.0 29.0 41.0 16 35.695366811260854 38.0 34.0 40.0 27.0 41.0 17 35.77676750524433 38.0 34.0 40.0 27.0 41.0 18 35.67617592120904 38.0 34.0 40.0 27.0 41.0 19 35.665116953196424 38.0 34.0 40.0 27.0 41.0 20 36.11249787739854 38.0 34.0 40.0 29.0 41.0 21 36.19347405108994 38.0 34.0 40.0 29.0 41.0 22 36.20319942505373 38.0 34.0 40.0 29.0 41.0 23 36.06195080367266 38.0 34.0 40.0 29.0 41.0 24 35.94562109462772 38.0 34.0 40.0 28.0 41.0 25 35.65215664884539 38.0 34.0 40.0 27.0 41.0 26 35.38806043110679 38.0 34.0 40.0 27.0 41.0 27 35.2089334506553 38.0 34.0 40.0 27.0 41.0 28 34.92596280344625 38.0 33.0 40.0 25.0 41.0 29 34.75815207603287 37.0 33.0 40.0 25.0 41.0 30 34.37160190802575 37.0 33.0 40.0 24.0 41.0 31 34.1782324861795 37.0 33.0 40.0 24.0 41.0 32 33.93851573984024 37.0 32.0 40.0 24.0 41.0 33 33.87473907010331 36.0 32.0 40.0 24.0 41.0 34 33.65779376375403 36.0 32.0 39.0 23.0 40.0 35 33.23835485093763 36.0 31.0 39.0 20.0 40.0 36 33.2484335630031 36.0 31.0 39.0 21.0 40.0 37 33.058720161369166 36.0 31.0 39.0 19.0 40.0 38 32.93172169993362 36.0 31.0 39.0 19.0 40.0 39 32.750322892707 35.0 30.0 39.0 18.0 40.0 40 32.4788254424016 35.0 30.0 39.0 16.0 40.0 41 32.20503815536928 35.0 30.0 39.0 15.0 40.0 42 31.944450447761707 35.0 30.0 39.0 15.0 40.0 43 31.693824816341372 35.0 30.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 5.0 11 4.0 12 9.0 13 14.0 14 31.0 15 68.0 16 134.0 17 266.0 18 561.0 19 1071.0 20 1979.0 21 3502.0 22 5382.0 23 8152.0 24 11850.0 25 16498.0 26 22069.0 27 29036.0 28 36631.0 29 44276.0 30 53821.0 31 63405.0 32 74999.0 33 86857.0 34 99905.0 35 114122.0 36 131527.0 37 146300.0 38 147444.0 39 66104.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.87901600484382 25.84127915253743 16.25466757917089 23.02503726344786 2 18.565001346458303 29.107769836246653 28.36190054733101 23.965328269964033 3 21.948470955093473 27.35814590119226 30.799676163914576 19.893706979799695 4 17.817845632415168 19.637708379430233 29.80106721828576 32.74337876986883 5 13.491340643658525 42.02939567177978 30.87780504999048 13.601458634571218 6 32.99414590805319 36.920658443837254 14.339866657747452 15.745328990362104 7 25.179713590309618 34.55680939124648 20.800808218026763 19.462668800417145 8 28.99988164888827 35.403277125131424 19.94216232626829 15.654678899712012 9 28.24920970616335 14.445267756526034 19.765579037102217 37.5399435002084 10 18.383615403482953 31.103787064051964 30.65902701664291 19.85357051582217 11 33.93469419959486 24.335990230029967 19.174423810185402 22.554891760189776 12 20.021234590771016 32.03232872107044 28.498347372519557 19.448089315638985 13 30.558428571673605 21.0024339163412 26.491695696993713 21.947441814991482 14 22.62633123560276 23.256079216344116 27.033452199015112 27.084137349038013 15 26.509448363753002 28.8430235450103 22.563982497757333 22.083545593479368 16 21.752848574040627 27.53627290051131 27.50436955734969 23.206508968098372 17 22.43551150835919 30.754479761102278 26.445555915754593 20.364452814783938 18 22.63499316479449 25.28897396447065 29.35313398889558 22.722898881839278 19 23.88205368337819 29.07140688597642 27.51843447207686 19.528104958568534 20 22.866978496117568 26.367255506328352 29.30244883887268 21.4633171586814 21 22.66552432115346 29.020893259303854 27.847244734661952 20.46633768488073 22 23.126579086843986 28.913176595295802 25.816150981713896 22.144093336146316 23 21.19050926997947 27.9557332537465 27.786525468644673 23.06723200762936 24 21.04720151077767 30.89255605811897 27.10978008991254 20.950462341190818 25 22.204812602163596 28.965834263847505 25.846510614722533 22.98284251926636 26 21.885521885521886 29.02235120778167 27.54021793756893 21.551908969127513 27 22.900511311107337 29.008029008029006 26.35181840479854 21.739641276065118 28 21.394707818548877 29.183325872067595 28.554092461377227 20.867873848006298 29 21.95678983758454 28.38445586789958 28.24809480438619 21.41065949012969 30 21.180132107284425 30.311434947196535 28.588911701494485 19.919521244024555 31 22.42273301875951 29.43649433715659 26.358593577136624 21.78217906694728 32 19.564124862138108 30.7359552392665 27.33361806209488 22.36630183650051 33 20.901235139645735 29.379720108196928 28.52767786542621 21.191366886731124 34 20.260338141132845 29.664620393097213 28.104186713458233 21.970854752311705 35 20.524827147343704 30.795473841831456 28.45598110498773 20.22371790583711 36 21.614686515348765 30.013584649346235 26.724195598367785 21.64753323693721 37 20.355190553866052 30.41743637770128 27.753078415330073 21.4742946531026 38 21.34599518705479 29.369600230527382 28.179914272629503 21.104490309788325 39 21.28570472941334 27.938152110337537 28.06525091293303 22.71089224731609 40 21.016584592743534 29.291814391152137 28.44483208721619 21.246768928888134 41 20.003481924011727 29.42405889425757 28.395519123995943 22.176940057734758 42 20.882967902835453 30.227474267209363 28.35812703362372 20.53143079633146 43 20.8621278157702 28.15512914850663 28.77227016299864 22.21047287272453 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 532.0 1 707.5 2 883.0 3 872.0 4 861.0 5 861.0 6 1173.0 7 1485.0 8 2268.0 9 3051.0 10 4976.5 11 6902.0 12 6902.0 13 15068.5 14 23235.0 15 29407.0 16 35579.0 17 27497.5 18 19416.0 19 19416.0 20 21594.0 21 23772.0 22 21338.5 23 18905.0 24 19412.0 25 19919.0 26 19919.0 27 21719.5 28 23520.0 29 24512.5 30 25505.0 31 27087.5 32 28670.0 33 28670.0 34 32329.5 35 35989.0 36 39818.0 37 43647.0 38 47384.0 39 51121.0 40 51121.0 41 55276.0 42 59431.0 43 64160.0 44 68889.0 45 79564.0 46 90239.0 47 90239.0 48 118486.5 49 146734.0 50 138186.0 51 129638.0 52 102094.0 53 74550.0 54 74550.0 55 65477.5 56 56405.0 57 52783.5 58 49162.0 59 44653.5 60 40145.0 61 40145.0 62 34034.0 63 27923.0 64 24125.0 65 20327.0 66 17275.5 67 14224.0 68 14224.0 69 11482.5 70 8741.0 71 7603.0 72 6465.0 73 5207.0 74 3949.0 75 3949.0 76 3062.0 77 2175.0 78 1814.5 79 1454.0 80 1167.0 81 880.0 82 880.0 83 751.5 84 623.0 85 497.5 86 372.0 87 358.5 88 345.0 89 345.0 90 261.0 91 177.0 92 132.5 93 88.0 94 75.5 95 63.0 96 63.0 97 40.0 98 17.0 99 15.5 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1166022.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.324837695553306 #Duplication Level Percentage of deduplicated Percentage of total 1 87.55871981661804 48.441719626848204 2 6.579401384469592 7.28008627459358 3 2.1278493676361996 3.5316876271517548 4 1.046501922063771 2.315901959450508 5 0.6061532896575919 1.6767666184465995 6 0.39006272831427835 1.2948094281043294 7 0.26648126791158566 1.0320123027279615 8 0.20239997153374242 0.8958196459751128 9 0.15069190074328842 0.7503304455591174 >10 0.8927380758339036 9.304046497726084 >50 0.09225692812724785 3.544053176981378 >100 0.07372400331602402 7.863431388281252 >500 0.007215539923431315 2.8010722630661675 >1k 0.004862646470138495 5.18281245762734 >5k 6.274382542114186E-4 1.87831607837792 >10k+ 3.137191271057093E-4 2.2071342090826853 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 15269 1.3094950181042897 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10164 0.8716816663836532 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5781 0.495788244132615 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 5651 0.48463922636108064 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 5121 0.4391855385232869 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 5091 0.43661268826831745 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 4740 0.40651034028517474 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 4250 0.36448711945400686 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 3855 0.33061125776357564 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 3298 0.2828420046963093 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2633 0.22581049071115294 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2553 0.21894955669790106 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 2528 0.21680551481875984 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 2327 0.19956741811046447 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2320 0.19896708638430494 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 2036 0.17461077063726071 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 2013 0.1726382521084508 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 1979 0.16972235515281875 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 1924 0.16500546301870805 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 1777 0.15239849676935768 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1696 0.14545180108094014 No Hit CATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGT 1449 0.12426866731502494 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATC 1439 0.12341105056336846 No Hit AAAAAGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 1429 0.12255343381171195 No Hit ATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTC 1372 0.11766501832726997 No Hit GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGC 1345 0.11534945309779746 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGG 1295 0.11106136933951505 No Hit CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT 1273 0.10917461248587075 No Hit GCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 1270 0.10891732746037382 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT 1260 0.10805971070871734 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 8.576167516564867E-5 10 0.0 0.0 0.0 8.576167516564867E-5 8.576167516564867E-5 11 0.0 0.0 0.0 2.57285025496946E-4 8.576167516564867E-5 12 0.0 0.0 0.0 4.288083758282434E-4 8.576167516564867E-5 13 0.0 0.0 0.0 6.003317261595408E-4 8.576167516564867E-5 14 0.0 0.0 0.0 7.718550764908381E-4 1.7152335033129734E-4 15 0.0 0.0 0.0 0.0016294718281473248 1.7152335033129734E-4 16 0.0 0.0 0.0 0.0028301352804664063 1.7152335033129734E-4 17 0.0 0.0 0.0 0.006089078936761056 1.7152335033129734E-4 18 0.0 0.0 0.0 0.007804312440074029 1.7152335033129734E-4 19 0.0 0.0 0.0 0.010119877669546544 1.7152335033129734E-4 20 0.0 0.0 0.0 0.012692727924516005 1.7152335033129734E-4 21 0.0 0.0 0.0 0.02015399366392744 1.7152335033129734E-4 22 0.0 0.0 0.0 0.03327552996427169 1.7152335033129734E-4 23 0.0 0.0 0.0 0.05454442540535256 2.57285025496946E-4 24 0.0 0.0 0.0 0.096910692937183 2.57285025496946E-4 25 0.0 0.0 0.0 0.12658423254449744 2.57285025496946E-4 26 0.0 0.0 0.0 0.16371903789122333 2.57285025496946E-4 27 0.0 0.0 0.0 0.2123459077101461 2.57285025496946E-4 28 0.0 0.0 0.0 0.2887595602827391 2.57285025496946E-4 29 0.0 0.0 0.0 0.3662881146324855 2.57285025496946E-4 30 0.0 0.0 0.0 0.48283823118260205 2.57285025496946E-4 31 0.0 0.0 0.0 0.6980142741732146 2.57285025496946E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAACT 125 1.8189894E-11 20.72 1 CGAACGT 85 1.2453402E-6 19.588236 4 TAAGATC 95 1.6761624E-7 19.473684 4 ATTCGAA 90 2.15227E-6 18.5 1 CGTGTTG 60 9.236924E-4 18.5 5 CGAGCCG 155 2.0008883E-11 17.903225 15 TCGAACG 95 3.6064775E-6 17.526316 3 CATATAG 85 2.7231703E-5 17.411764 3 TATACTG 160 3.45608E-11 17.34375 5 TTAGAGT 150 2.5102054E-10 17.266666 4 CAAGACG 250 0.0 17.02 4 AGACCGT 120 1.0412077E-7 16.958334 6 AAGACGG 255 0.0 16.686274 5 TATCTAG 190 1.8189894E-12 16.552631 1 TCATGCA 90 4.446046E-5 16.444445 2 CAATACT 90 4.446046E-5 16.444445 4 TAGAGTG 140 3.4726327E-8 15.857143 5 ACCGTGA 130 2.5888585E-7 15.653846 8 CGAGACT 145 5.3449185E-8 15.310345 20 TAGAGTC 220 1.8189894E-12 15.136364 5 >>END_MODULE