##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727101.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3764641 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.41554400539122 31.0 30.0 31.0 27.0 34.0 2 30.80560058714762 31.0 31.0 34.0 27.0 34.0 3 31.14819580406206 31.0 31.0 34.0 28.0 34.0 4 35.04918583206207 35.0 35.0 37.0 32.0 37.0 5 34.760725126247095 35.0 35.0 37.0 32.0 37.0 6 34.65207465997422 35.0 35.0 37.0 31.0 37.0 7 34.501533346738775 35.0 35.0 37.0 30.0 37.0 8 34.50514644025818 35.0 35.0 37.0 30.0 37.0 9 35.86560019932843 37.0 35.0 39.0 30.0 39.0 10 35.69714323357792 37.0 35.0 39.0 30.0 39.0 11 35.69651873844013 37.0 35.0 39.0 30.0 39.0 12 35.53140976789022 37.0 35.0 39.0 30.0 39.0 13 35.64794093248201 37.0 35.0 39.0 30.0 39.0 14 36.39228893272958 38.0 35.0 40.0 30.0 41.0 15 36.387201063793334 38.0 35.0 40.0 30.0 41.0 16 36.23003282384695 38.0 34.0 40.0 30.0 41.0 17 36.215912221112184 38.0 34.0 40.0 30.0 41.0 18 36.08797810999774 38.0 34.0 40.0 29.0 41.0 19 36.018284346369285 38.0 34.0 40.0 28.0 41.0 20 36.485843138827846 38.0 35.0 40.0 30.0 41.0 21 36.576214040063846 38.0 35.0 40.0 30.0 41.0 22 36.55584768906252 38.0 35.0 40.0 30.0 41.0 23 36.46183713134931 38.0 35.0 40.0 30.0 41.0 24 36.3137515635621 38.0 35.0 40.0 30.0 41.0 25 36.009566383620644 38.0 34.0 40.0 28.0 41.0 26 35.78370022533357 38.0 34.0 40.0 27.0 41.0 27 35.62366717038889 38.0 34.0 40.0 27.0 41.0 28 35.34909278202092 38.0 34.0 40.0 27.0 41.0 29 35.18036168654594 38.0 34.0 40.0 26.0 41.0 30 34.84011436947109 38.0 33.0 40.0 25.0 41.0 31 34.68929812962245 38.0 33.0 40.0 25.0 41.0 32 34.46450883364443 37.0 33.0 40.0 24.0 41.0 33 34.403216136678104 37.0 33.0 40.0 24.0 41.0 34 34.2023704252278 37.0 33.0 40.0 24.0 41.0 35 33.787561682508375 37.0 32.0 40.0 22.0 41.0 36 33.78163389284662 37.0 32.0 40.0 22.0 41.0 37 33.626843037622976 37.0 32.0 40.0 21.0 41.0 38 33.49233140689909 37.0 31.0 40.0 21.0 41.0 39 33.35091101648205 37.0 31.0 40.0 19.0 41.0 40 33.1096638431128 37.0 31.0 40.0 18.0 41.0 41 32.87974789628015 36.0 31.0 40.0 16.0 41.0 42 32.68050154051874 36.0 30.0 40.0 15.0 41.0 43 32.516558949445646 36.0 30.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 15.0 11 22.0 12 29.0 13 31.0 14 96.0 15 174.0 16 352.0 17 729.0 18 1382.0 19 2795.0 20 5012.0 21 8997.0 22 14764.0 23 22423.0 24 32971.0 25 45252.0 26 60677.0 27 79383.0 28 101165.0 29 125563.0 30 153056.0 31 184431.0 32 220908.0 33 260138.0 34 306329.0 35 353615.0 36 414362.0 37 478050.0 38 536714.0 39 355205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.58109763985464 23.263227489686265 14.883225253085222 25.272449617373876 2 18.172489754003106 25.994908943508822 31.415611740933596 24.416989561554477 3 19.77107511712272 27.01771563344287 30.474486146222173 22.73672310321223 4 15.86127335913305 18.214937360561073 32.246341683044946 33.67744759726094 5 13.226201382814457 40.793053042773536 32.35086692197211 13.629878652439901 6 33.054997807227835 37.420487106207474 14.950721728844796 14.5737933577199 7 27.006904509619904 33.401113147309395 21.04630959499193 18.54567274807877 8 28.205372039458744 35.639122030493745 19.631885218271808 16.523620711775706 9 28.397900357563977 14.676193560023387 19.063172291859967 37.862733790552674 10 17.652015158948757 29.5667236265025 31.473386174139844 21.3078750404089 11 35.087196893408965 23.777380100785177 19.899241388488303 21.236181617317563 12 21.065195857984865 29.44501215388134 28.66063457312397 20.829157415009824 13 30.116550289921403 20.78277849069805 25.430897660626872 23.669773558753676 14 22.65060599403768 22.709177315977804 25.510374030352427 29.12984265963209 15 26.149292854219038 28.572365864367942 21.98722268604098 23.291118595372044 16 23.24208337528067 27.184849763895148 25.88092729160629 23.692139569217886 17 23.472995167401088 28.909582613587858 25.280179438092503 22.337242780918555 18 23.963931753386312 25.307406469833378 27.292721935504606 23.4359398412757 19 24.648485738746402 27.559414031776203 26.264124520771038 21.527975708706354 20 23.69984282697872 25.828359198128055 27.299282986080215 23.172514988813013 21 23.97028030029955 27.611105547647174 26.459548201276036 21.959065950777244 22 23.91364807427853 27.178421528108526 25.004721565748234 23.90320883186471 23 22.388243659886825 26.89815576040318 26.269012105005494 24.444588474704492 24 22.496248646285263 28.84155487867236 25.863236361714172 22.798960113328203 25 23.52394292045377 27.2254379634074 24.917249745726085 24.333369370412743 26 23.409270631648543 27.407341098394244 26.164885310445275 23.018502959511945 27 24.174124438425867 27.357641804357975 25.064249154169016 23.403984603047142 28 22.90399004845349 27.751198587063147 26.49989733416812 22.84491403031524 29 23.18691211193843 27.27797949392784 26.73713111024398 22.797977283889754 30 22.856362665125307 28.469806284317684 26.78268658286408 21.891144467692936 31 23.96103639098655 27.36258251450802 25.3105408988533 23.365840195652122 32 21.520511517565684 28.461784271063294 26.01209517720282 24.0056090341682 33 22.405934589778944 27.481053306278074 26.752139181398704 23.360872922544274 34 22.362318213077952 27.711460402200373 26.787866359634293 23.138355025087385 35 22.79396627726256 28.303070598232345 26.849014288480628 22.05394883602447 36 23.086743198089803 27.852217515561247 26.049681762484123 23.011357523864824 37 22.553784012871347 27.98269476425508 26.543301207206742 22.920220015666832 38 22.97276154618727 27.117672043629128 27.02247040288835 22.887096007295252 39 23.04952849421764 26.259582254987922 26.83785784620632 23.853031404588112 40 22.846401555951815 27.142827164661913 27.303214303834018 22.70755697555225 41 21.590823666851634 27.55024981133659 27.46623117582792 23.392695345983853 42 22.858939272031517 27.76219565159068 27.40115192922778 21.97771314715002 43 22.31362831143793 26.29244063378155 27.51091007084075 23.88302098393977 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1197.0 1 1563.0 2 1929.0 3 1957.5 4 1986.0 5 1986.0 6 2573.5 7 3161.0 8 4729.0 9 6297.0 10 10177.0 11 14057.0 12 14057.0 13 29389.0 14 44721.0 15 55145.0 16 65569.0 17 52778.5 18 39988.0 19 39988.0 20 45835.0 21 51682.0 22 47921.5 23 44161.0 24 48460.0 25 52759.0 26 52759.0 27 58694.0 28 64629.0 29 69983.5 30 75338.0 31 82011.0 32 88684.0 33 88684.0 34 102198.0 35 115712.0 36 132546.0 37 149380.0 38 166141.0 39 182902.0 40 182902.0 41 194896.5 42 206891.0 43 218777.0 44 230663.0 45 258924.0 46 287185.0 47 287185.0 48 350292.0 49 413399.0 50 399690.0 51 385981.0 52 325051.0 53 264121.0 54 264121.0 55 243067.5 56 222014.0 57 211079.0 58 200144.0 59 184600.5 60 169057.0 61 169057.0 62 143463.5 63 117870.0 64 102625.5 65 87381.0 66 73998.5 67 60616.0 68 60616.0 69 49627.0 70 38638.0 71 34466.0 72 30294.0 73 24216.5 74 18139.0 75 18139.0 76 13881.0 77 9623.0 78 8226.5 79 6830.0 80 5390.5 81 3951.0 82 3951.0 83 3350.0 84 2749.0 85 2229.5 86 1710.0 87 1701.0 88 1692.0 89 1692.0 90 1207.0 91 722.0 92 566.5 93 411.0 94 352.5 95 294.0 96 294.0 97 177.0 98 60.0 99 57.0 100 54.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3764641.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.4071591150291 #Duplication Level Percentage of deduplicated Percentage of total 1 85.30136340372583 43.85100761224254 2 7.719626002991603 7.936880844886109 3 2.431653745488298 3.750132330209202 4 1.2430809631959256 2.556130434715063 5 0.7234537992402615 1.859535228495822 6 0.5001286927044086 1.5426117170308213 7 0.34359206202526743 1.2364164262235708 8 0.25071282397273603 1.0310747227315777 9 0.19235898090578413 0.889976586476564 >10 1.1160319177635678 10.607209792264632 >50 0.08779423387635577 3.1844886141840516 >100 0.07213421363219674 7.592365062669878 >500 0.010799957991244473 3.83970836425133 >1k 0.006542282237912186 6.076637699841656 >5k 4.1538299923251965E-4 1.416655184252608 >10k+ 3.115372494243898E-4 2.6291693795244737 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 28398 0.7543348754901198 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19310 0.5129307150402921 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 14375 0.3818425183171516 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 13902 0.3692782392796551 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12298 0.32667125497490995 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 10217 0.2713937398014844 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 8200 0.21781625392700127 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 7602 0.20193160516500777 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7407 0.19675182839479247 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 7080 0.18806574119550842 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 6805 0.1807609278016151 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 5860 0.155658932684418 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 5064 0.13451481827882128 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 5056 0.13430231461645348 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 4712 0.1251646571346378 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4496 0.11942705825070704 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 4052 0.10763310498929379 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3993 0.10606589047933122 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 3990 0.1059862016059433 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 3982 0.10577369794357551 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3877 0.10298458737499805 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.312591559195153E-5 2 0.0 0.0 0.0 0.0 5.312591559195153E-5 3 0.0 0.0 0.0 0.0 5.312591559195153E-5 4 0.0 0.0 0.0 0.0 5.312591559195153E-5 5 0.0 0.0 0.0 0.0 5.312591559195153E-5 6 0.0 0.0 0.0 0.0 7.96888733879273E-5 7 0.0 0.0 0.0 0.0 7.96888733879273E-5 8 0.0 0.0 0.0 0.0 7.96888733879273E-5 9 0.0 0.0 0.0 5.312591559195153E-5 1.0625183118390306E-4 10 0.0 0.0 0.0 1.3281478897987883E-4 1.0625183118390306E-4 11 2.6562957795975765E-5 0.0 0.0 2.1250366236780612E-4 1.0625183118390306E-4 12 2.6562957795975765E-5 0.0 0.0 2.1250366236780612E-4 1.0625183118390306E-4 13 2.6562957795975765E-5 5.312591559195153E-5 0.0 2.390666201637819E-4 1.0625183118390306E-4 14 5.312591559195153E-5 5.312591559195153E-5 0.0 3.718814091436607E-4 1.3281478897987883E-4 15 7.96888733879273E-5 5.312591559195153E-5 0.0 5.046961981235395E-4 1.3281478897987883E-4 16 7.96888733879273E-5 5.312591559195153E-5 0.0 0.0015140885943706185 1.3281478897987883E-4 17 7.96888733879273E-5 5.312591559195153E-5 0.0 0.0030016142309452613 1.3281478897987883E-4 18 7.96888733879273E-5 5.312591559195153E-5 0.0 0.003851628880416486 1.8594070457183035E-4 19 7.96888733879273E-5 5.312591559195153E-5 0.0 0.005684472968338814 1.8594070457183035E-4 20 7.96888733879273E-5 5.312591559195153E-5 0.0 0.0073845022672812625 1.8594070457183035E-4 21 7.96888733879273E-5 5.312591559195153E-5 0.0 0.012590841995292512 1.8594070457183035E-4 22 7.96888733879273E-5 5.312591559195153E-5 0.0 0.020851921869840976 1.8594070457183035E-4 23 1.0625183118390306E-4 5.312591559195153E-5 0.0 0.03761314823910168 3.187554935517092E-4 24 1.0625183118390306E-4 5.312591559195153E-5 0.0 0.0656636316716521 3.187554935517092E-4 25 1.0625183118390306E-4 5.312591559195153E-5 0.0 0.08611710917455342 3.453184513476849E-4 26 1.0625183118390306E-4 5.312591559195153E-5 0.0 0.1086159344277449 3.453184513476849E-4 27 1.0625183118390306E-4 5.312591559195153E-5 0.0 0.1408368022342635 3.453184513476849E-4 28 1.0625183118390306E-4 5.312591559195153E-5 0.0 0.20323319009701057 3.453184513476849E-4 29 1.0625183118390306E-4 5.312591559195153E-5 0.0 0.26220295640407676 3.453184513476849E-4 30 1.0625183118390306E-4 5.312591559195153E-5 0.0 0.347443487971363 3.453184513476849E-4 31 1.0625183118390306E-4 5.312591559195153E-5 0.0 0.5329591852184578 3.453184513476849E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAC 290 0.0 18.500002 23 CGAACGT 275 0.0 18.163635 4 GGTTATC 570 0.0 17.850878 2 GTAATAC 260 0.0 17.076923 3 AAGACGG 1080 0.0 16.958332 5 CAAGACG 1090 0.0 16.463303 4 TCGAACG 310 0.0 16.112904 3 AGGTTAT 670 0.0 15.186567 1 ATTCGAA 355 0.0 15.112676 1 GTTATCT 735 0.0 15.10204 3 CGAACGA 590 0.0 15.050847 16 TATCTAG 1040 0.0 14.764423 1 TAACGCC 915 0.0 14.759563 4 TTAGAGT 680 0.0 14.691176 4 TAATACC 395 0.0 14.518987 4 ATAACGC 995 0.0 14.502513 3 TACCGTC 945 0.0 14.486773 7 ATACCGT 950 0.0 14.410526 6 TAGAGTG 655 0.0 14.40458 5 TCGTTTA 890 0.0 14.342696 30 >>END_MODULE