##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727099.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3199668 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.463004911759594 31.0 30.0 31.0 28.0 34.0 2 30.849358745969894 31.0 31.0 34.0 28.0 34.0 3 31.17887918371531 31.0 31.0 34.0 28.0 34.0 4 35.073130712311404 35.0 35.0 37.0 32.0 37.0 5 34.785947479551005 35.0 35.0 37.0 32.0 37.0 6 34.68310805996122 35.0 35.0 37.0 32.0 37.0 7 34.52511666835434 35.0 35.0 37.0 30.0 37.0 8 34.51503374725128 35.0 35.0 37.0 30.0 37.0 9 35.882291850279465 37.0 35.0 39.0 30.0 39.0 10 35.71731817176032 37.0 35.0 39.0 30.0 39.0 11 35.718447663945135 37.0 35.0 39.0 30.0 39.0 12 35.55615488856969 37.0 35.0 39.0 30.0 39.0 13 35.66843997564747 37.0 35.0 39.0 30.0 39.0 14 36.41198618106628 38.0 35.0 40.0 30.0 41.0 15 36.409636249760915 38.0 35.0 40.0 30.0 41.0 16 36.22482738834154 38.0 34.0 40.0 30.0 41.0 17 36.21910898255694 38.0 34.0 40.0 30.0 41.0 18 36.092820880166315 38.0 34.0 40.0 29.0 41.0 19 36.024774445348704 38.0 34.0 40.0 28.0 41.0 20 36.49158756470984 38.0 35.0 40.0 30.0 41.0 21 36.59249053339284 38.0 35.0 40.0 30.0 41.0 22 36.59445104929637 38.0 35.0 40.0 30.0 41.0 23 36.48701709052314 38.0 35.0 40.0 30.0 41.0 24 36.35401954202749 38.0 35.0 40.0 30.0 41.0 25 36.0536574419596 38.0 34.0 40.0 28.0 41.0 26 35.836705245669236 38.0 34.0 40.0 27.0 41.0 27 35.68070781093538 38.0 34.0 40.0 27.0 41.0 28 35.40468854893695 38.0 34.0 40.0 27.0 41.0 29 35.24560891942539 38.0 34.0 40.0 26.0 41.0 30 34.89986148562913 38.0 33.0 40.0 25.0 41.0 31 34.73630482912602 38.0 33.0 40.0 25.0 41.0 32 34.507539844758895 37.0 33.0 40.0 24.0 41.0 33 34.47006845710242 37.0 33.0 40.0 24.0 41.0 34 34.27272266997701 37.0 33.0 40.0 24.0 41.0 35 33.88254468901148 37.0 32.0 40.0 22.0 41.0 36 33.87713662792515 37.0 32.0 40.0 23.0 41.0 37 33.69049132597507 37.0 32.0 40.0 21.0 41.0 38 33.55137439259323 37.0 31.0 40.0 21.0 41.0 39 33.404494153768454 37.0 31.0 40.0 20.0 41.0 40 33.17287574835889 37.0 31.0 40.0 18.0 41.0 41 32.94312816204681 36.0 31.0 40.0 17.0 41.0 42 32.741916036288764 36.0 30.0 40.0 15.0 41.0 43 32.56261430873453 36.0 30.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 9.0 11 17.0 12 31.0 13 33.0 14 87.0 15 138.0 16 277.0 17 513.0 18 1165.0 19 2176.0 20 4199.0 21 7213.0 22 11923.0 23 18973.0 24 26867.0 25 38194.0 26 50688.0 27 66414.0 28 85801.0 29 105507.0 30 129286.0 31 156303.0 32 185794.0 33 219132.0 34 258866.0 35 299040.0 36 351885.0 37 408919.0 38 464260.0 39 305958.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.15113568032684 22.762611620955674 14.603515114693149 25.482737584024346 2 17.85078951941264 26.197436734061156 31.054784433885015 24.89698931264119 3 19.97222836869325 27.10846875363319 30.274828513458274 22.644474364215288 4 15.998534847990479 18.23598573351985 31.51255067713275 34.25292874135691 5 13.333320832036325 40.55539512224393 32.134146417690836 13.977137628028908 6 33.46991000316283 36.29939106182267 15.054561910798245 15.176137024216263 7 27.00477049493885 33.04855378745545 21.04621479478496 18.90046092282074 8 28.316187804484716 35.28416073167591 19.910909506861337 16.488741956978036 9 28.4566711296297 14.665677814073211 19.06832208841667 37.80932896788042 10 17.945299324804946 29.39111182785214 31.21739505473693 21.446193792605982 11 34.73382238407235 23.691364229038765 19.832151335701077 21.74266205118781 12 21.184229113770552 29.478464640706477 28.46698469966259 20.87032154586038 13 30.329177902207356 20.586510850500737 25.31843928807614 23.76587195921577 14 22.945693115660752 22.479394737203982 25.333128312062374 29.241783835072887 15 26.591571375530208 27.9575255932803 21.88480179818656 23.56610123300292 16 23.123524065621808 26.926918667811783 26.32007445772499 23.629482808841416 17 23.83444157331323 28.906592809003932 25.254901446025023 22.00406417165781 18 24.344838276971238 24.80226073455121 27.348368643246733 23.504532345230817 19 24.96308992057926 27.83707559659315 25.934784483890205 21.265049998937393 20 23.7621215701129 25.68253956347971 27.527856015061563 23.027482851345827 21 23.872039224069496 27.809228957504338 26.39764500566934 21.921086812756823 22 24.124659183390275 27.234888119642413 24.383186005548076 24.257266691419236 23 22.187770731213362 27.0392115682002 25.85052574204574 24.9224919585407 24 22.435140145790125 29.346732223468187 25.423325169986388 22.794802460755303 25 23.690020339610236 27.386310079670768 24.320835786712873 24.60283379400613 26 23.52987872491771 27.309458356304468 25.844993918119002 23.31566900065882 27 24.42669051914136 27.423688957729365 24.557360326133836 23.592260196995436 28 23.027076559193016 27.969808117592198 26.134492703618 22.868622619596785 29 23.229910103173204 27.287643593022775 26.590477512041875 22.891968791762146 30 22.87306058003518 28.726667891793774 26.710177430908455 21.69009409726259 31 24.224513293254173 27.454942200253274 24.705469442454657 23.615075064037892 32 21.23110897755642 28.623750964162532 25.768329714207848 24.376810344073196 33 22.296532015196576 27.69887375815241 26.54244127828262 23.46215294836839 34 22.05406935969607 27.914927423720208 26.447712700192643 23.583290516391074 35 22.651068798387833 28.63268939152437 26.666704170557697 22.0495376395301 36 23.33260825810678 27.971433286203446 25.537649531138857 23.158308924550923 37 22.488989482658823 28.228991257843 26.262599744723513 23.019419514774658 38 23.037515142196003 27.474162944405485 26.682705830729937 22.805616082668575 39 23.18287397317472 26.169683854699926 26.519813930695307 24.12762824143005 40 22.938067324484916 27.394092137059218 26.80253076256662 22.865309775889248 41 21.52510822997886 27.72062601494905 27.03455483506414 23.719710920007948 42 23.037202609770763 28.071943714160348 26.978017719338382 21.91283595673051 43 22.558621707002104 26.28269557966639 27.14744154706051 24.011241166271 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 764.0 1 1165.5 2 1567.0 3 1670.0 4 1773.0 5 1773.0 6 2293.0 7 2813.0 8 4225.5 9 5638.0 10 9067.0 11 12496.0 12 12496.0 13 25110.0 14 37724.0 15 46234.5 16 54745.0 17 44021.5 18 33298.0 19 33298.0 20 37774.0 21 42250.0 22 39117.5 23 35985.0 24 38872.5 25 41760.0 26 41760.0 27 46444.5 28 51129.0 29 54569.5 30 58010.0 31 62628.5 32 67247.0 33 67247.0 34 78102.5 35 88958.0 36 102865.0 37 116772.0 38 131848.0 39 146924.0 40 146924.0 41 156600.0 42 166276.0 43 179525.5 44 192775.0 45 221521.5 46 250268.0 47 250268.0 48 321302.0 49 392336.0 50 378020.0 51 363704.0 52 295734.5 53 227765.0 54 227765.0 55 206005.5 56 184246.0 57 174880.5 58 165515.0 59 152996.5 60 140478.0 61 140478.0 62 119317.0 63 98156.0 64 84677.0 65 71198.0 66 60520.0 67 49842.0 68 49842.0 69 40991.5 70 32141.0 71 28811.0 72 25481.0 73 20448.0 74 15415.0 75 15415.0 76 11849.5 77 8284.0 78 7077.5 79 5871.0 80 4642.5 81 3414.0 82 3414.0 83 2887.0 84 2360.0 85 1924.5 86 1489.0 87 1498.0 88 1507.0 89 1507.0 90 1054.0 91 601.0 92 470.0 93 339.0 94 298.0 95 257.0 96 257.0 97 152.0 98 47.0 99 48.5 100 50.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3199668.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.77740724251537 #Duplication Level Percentage of deduplicated Percentage of total 1 84.64410450642687 42.133640606944404 2 7.9221632772740564 7.886894953891418 3 2.643223763620085 3.947184771444334 4 1.2918975919840219 2.5722925020725445 5 0.7924853167797307 1.9723932173529226 6 0.5136552089134004 1.5341054709792987 7 0.3565716590949616 1.2424448880136483 8 0.26737225062525316 1.0647277923776888 9 0.2002753012641151 0.8972266708477181 >10 1.1802204023658474 10.671891085557576 >50 0.09204149265769745 3.1920079339755674 >100 0.07712387506147328 7.967036352266472 >500 0.010978500281799291 3.7268138839430356 >1k 0.006940431212538811 6.343831072981944 >5k 6.309482920489829E-4 2.2789839700813355 >10k+ 3.1547414602449143E-4 2.5685248272699828 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 22920 0.7163243186480597 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16042 0.5013645165685939 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 15935 0.4980204196185355 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 15472 0.4835501683299642 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 11413 0.35669325692540604 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 9502 0.29696831046221045 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 9043 0.2826230721437349 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 8281 0.2588081013405141 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 7793 0.24355651898884512 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 7119 0.2224918335277285 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 7070 0.2209604246440568 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 6435 0.2011146156413728 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 6373 0.19917691460489026 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5580 0.17439309328342814 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 5367 0.1677361526258349 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 4574 0.14295233130437285 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 4542 0.14195222754360765 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 4479 0.1399832732646012 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3403 0.10635478430887206 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3321 0.10379201842191127 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 3229 0.10091672010971138 No Hit CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT 3224 0.10076045389709183 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGT 3208 0.10026040201670924 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.1253242523911856E-5 0.0 3 0.0 0.0 0.0 3.1253242523911856E-5 0.0 4 0.0 0.0 0.0 3.1253242523911856E-5 0.0 5 0.0 0.0 0.0 3.1253242523911856E-5 0.0 6 0.0 0.0 0.0 3.1253242523911856E-5 3.1253242523911856E-5 7 0.0 0.0 0.0 3.1253242523911856E-5 3.1253242523911856E-5 8 3.1253242523911856E-5 0.0 0.0 3.1253242523911856E-5 3.1253242523911856E-5 9 3.1253242523911856E-5 0.0 0.0 3.1253242523911856E-5 3.1253242523911856E-5 10 3.1253242523911856E-5 0.0 0.0 3.1253242523911856E-5 3.1253242523911856E-5 11 3.1253242523911856E-5 0.0 0.0 1.2501297009564742E-4 3.1253242523911856E-5 12 3.1253242523911856E-5 0.0 0.0 2.5002594019129485E-4 3.1253242523911856E-5 13 3.1253242523911856E-5 0.0 0.0 3.1253242523911857E-4 3.1253242523911856E-5 14 3.1253242523911856E-5 0.0 0.0 4.3754539533476597E-4 3.1253242523911856E-5 15 3.1253242523911856E-5 0.0 0.0 8.438375481456201E-4 3.1253242523911856E-5 16 3.1253242523911856E-5 0.0 0.0 0.0019064477939586232 3.1253242523911856E-5 17 3.1253242523911856E-5 0.0 0.0 0.0036566293752976872 3.1253242523911856E-5 18 3.1253242523911856E-5 0.0 0.0 0.004625479893538955 3.1253242523911856E-5 19 3.1253242523911856E-5 0.0 0.0 0.006813206870212784 3.1253242523911856E-5 20 3.1253242523911856E-5 0.0 0.0 0.00878216114921923 3.1253242523911856E-5 21 3.1253242523911856E-5 0.0 0.0 0.01381393319556904 3.1253242523911856E-5 22 3.1253242523911856E-5 0.0 0.0 0.022971133255075216 3.1253242523911856E-5 23 3.1253242523911856E-5 0.0 0.0 0.04194185146708971 9.375972757173557E-5 24 3.1253242523911856E-5 0.0 0.0 0.07682047012377534 9.375972757173557E-5 25 3.1253242523911856E-5 0.0 0.0 0.10179181090038092 9.375972757173557E-5 26 6.250648504782371E-5 0.0 0.0 0.13091983293266676 9.375972757173557E-5 27 6.250648504782371E-5 0.0 0.0 0.1734242427651869 9.375972757173557E-5 28 6.250648504782371E-5 0.0 0.0 0.24296270738089076 9.375972757173557E-5 29 6.250648504782371E-5 0.0 0.0 0.30693809482733836 9.375972757173557E-5 30 6.250648504782371E-5 0.0 0.0 0.3999477445785 9.375972757173557E-5 31 6.250648504782371E-5 0.0 0.0 0.5780912269647976 9.375972757173557E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCGT 30 3.600902E-4 30.833332 31 TATACCG 100 2.8789145E-7 18.499998 5 GGTTATC 470 0.0 18.106384 2 TATTCCG 85 2.7255755E-5 17.411764 5 AGGTTAT 535 0.0 16.598131 1 ATACCGT 695 0.0 15.705036 6 TATCTAG 955 0.0 15.6911 1 TACCGTC 670 0.0 15.462687 7 CGAACGT 290 0.0 15.310345 4 CTAGAGT 1150 0.0 15.121739 4 GTGCGAT 175 2.242814E-9 14.8 33 TAGAGTC 1065 0.0 14.765258 5 AGTACTC 1630 0.0 14.41411 5 ACCGTCG 695 0.0 14.374101 8 CAAGACG 840 0.0 14.315475 4 CCGTCGT 690 0.0 14.210145 9 CGTCGTA 710 0.0 14.070422 10 TTATCTA 605 0.0 14.066116 4 TCGAACG 330 0.0 14.015151 3 TCGACTA 80 0.0063018613 13.875 27 >>END_MODULE