##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727098.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2965526 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.43778607909693 31.0 30.0 31.0 28.0 34.0 2 30.833750572411102 31.0 31.0 34.0 27.0 34.0 3 31.15130772753299 31.0 31.0 34.0 28.0 34.0 4 35.06494395935156 35.0 35.0 37.0 32.0 37.0 5 34.7749201996543 35.0 35.0 37.0 32.0 37.0 6 34.66325333178667 35.0 35.0 37.0 31.0 37.0 7 34.49889800325474 35.0 35.0 37.0 30.0 37.0 8 34.508303080128115 35.0 35.0 37.0 30.0 37.0 9 35.833446747727045 37.0 35.0 39.0 30.0 39.0 10 35.683914759135476 37.0 35.0 39.0 30.0 39.0 11 35.67499458780668 37.0 35.0 39.0 30.0 39.0 12 35.51792666798403 37.0 35.0 39.0 30.0 39.0 13 35.64528957088894 37.0 35.0 39.0 30.0 39.0 14 36.35586806522688 38.0 35.0 40.0 30.0 41.0 15 36.37460099827147 38.0 35.0 40.0 30.0 41.0 16 36.203019632942016 38.0 34.0 40.0 30.0 41.0 17 36.225159044297705 38.0 34.0 40.0 30.0 41.0 18 36.1202056566019 38.0 34.0 40.0 29.0 41.0 19 36.066976988230756 38.0 34.0 40.0 29.0 41.0 20 36.53590290558909 38.0 35.0 40.0 30.0 41.0 21 36.623850203977305 38.0 35.0 40.0 30.0 41.0 22 36.614331150696366 38.0 35.0 40.0 30.0 41.0 23 36.5266343980798 38.0 35.0 40.0 30.0 41.0 24 36.37882621835047 38.0 35.0 40.0 30.0 41.0 25 36.072557448493114 38.0 34.0 40.0 29.0 41.0 26 35.849711990385515 38.0 34.0 40.0 27.0 41.0 27 35.679187435888274 38.0 34.0 40.0 27.0 41.0 28 35.41039161349454 38.0 34.0 40.0 27.0 41.0 29 35.22762707189214 38.0 34.0 40.0 26.0 41.0 30 34.874417894161105 38.0 33.0 40.0 25.0 41.0 31 34.70280078475117 38.0 33.0 40.0 25.0 41.0 32 34.493635530425294 37.0 33.0 40.0 24.0 41.0 33 34.41202943423865 37.0 33.0 40.0 24.0 41.0 34 34.22659824934936 37.0 33.0 40.0 24.0 41.0 35 33.79634102010908 37.0 32.0 40.0 22.0 41.0 36 33.76803980137082 37.0 32.0 40.0 22.0 41.0 37 33.60512941043174 37.0 32.0 40.0 21.0 41.0 38 33.44693824974052 37.0 31.0 40.0 21.0 41.0 39 33.290428409664926 36.0 31.0 40.0 19.0 41.0 40 33.0239353827955 36.0 31.0 40.0 18.0 41.0 41 32.76503089165295 36.0 31.0 40.0 16.0 41.0 42 32.540270090365084 36.0 30.0 39.0 15.0 41.0 43 32.327173661603375 36.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 3.0 10 7.0 11 14.0 12 26.0 13 28.0 14 58.0 15 164.0 16 274.0 17 563.0 18 969.0 19 2066.0 20 3890.0 21 6782.0 22 11362.0 23 17357.0 24 25620.0 25 35745.0 26 47731.0 27 62707.0 28 79254.0 29 98899.0 30 120585.0 31 145540.0 32 173228.0 33 206067.0 34 243078.0 35 279255.0 36 328974.0 37 381717.0 38 415507.0 39 278054.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.202742447714165 23.018951781235437 14.964663941573942 24.813641829476456 2 18.330879580890542 26.46498462667331 30.915156366863755 24.288979425572393 3 20.01402112137948 27.057796829297736 30.65803503324537 22.27014701607742 4 16.191764968508117 17.96865041817202 31.347322532326476 34.49226208099339 5 13.388215109225143 41.02729161706895 31.613076398588312 13.971416875117601 6 33.44705121452316 36.792427380505174 14.780581927118494 14.979939477853172 7 27.165703487340863 33.67298077980095 20.43222686295787 18.729088869900316 8 28.925829684177444 35.05421972358361 19.42039961881973 16.59955097341922 9 28.764475509572335 14.368614539208222 19.123217938402835 37.74369201281662 10 18.071465230788736 29.87689199150505 30.722340657272944 21.329302120433272 11 34.74446017333856 23.794766931734877 19.71997547821196 21.740797416714607 12 21.17796303252779 30.037436866174836 28.22737011916267 20.557229982134704 13 30.229106067523944 20.659707586445037 25.732972835173257 23.37821351085777 14 22.761223472665556 22.757345577142132 25.773741319415173 28.70768963077714 15 26.329629212490463 28.651713051917266 22.020241940215666 22.9984157953766 16 22.765067647358343 27.061877049804995 26.194138914985064 23.978916387851598 17 23.110031744789964 29.14906158300416 25.393066862337406 22.347839809868468 18 23.38040536484927 25.415929585510295 27.689320545495132 23.514344504145303 19 24.414656961361995 27.339702973435404 26.84963814176642 21.39600192343618 20 23.4784992611766 25.997748797346574 27.70911467307992 22.814637268396908 21 24.040692949581288 27.625014921467557 26.868622969415878 21.465669159535274 22 23.935551399650517 27.25169160546898 25.362448348117674 23.450308646762835 23 22.275474907318298 27.390857473513975 26.663364273319473 23.670303345848257 24 22.28596208564686 29.080878063453163 26.165577371434274 22.4675824794657 25 23.071657439523378 27.902503636791586 25.412388898293255 23.613450025391785 26 23.157814161804684 27.91056291531418 26.420844059367543 22.51077886351359 27 23.525135169949614 28.152004062685677 25.380961084138193 22.941899683226517 28 22.32504452835686 28.6464863231683 26.81729986518412 22.211169283290722 29 22.73879912029097 28.027034664339478 26.98128426457903 22.252881950790517 30 22.44697905194559 29.32977151439576 26.919237936204233 21.304011497454415 31 23.293371900971362 28.422546286898175 25.647625412827267 22.636456399303192 32 21.036976239628316 29.43582352675377 26.21244932602176 23.314750907596157 33 21.632722154518287 28.483041457063603 27.044679426179368 22.83955696223874 34 21.62338148443143 28.79994982340401 26.82704518523864 22.74962350692592 35 22.038720955405548 29.305526237166696 26.96779593232364 21.687956875104113 36 22.297326005572028 29.10458380739201 26.13293560737623 22.46515457965973 37 21.699556840843748 29.25760893682942 26.625158572206075 22.417675650120756 38 22.144300876134622 28.47906239904826 27.03645154350358 22.340185181313537 39 22.116987003317455 27.697784473985394 26.912358886753985 23.27286963594317 40 22.09978937969183 28.47359962448483 27.256783450895387 22.169827544927948 41 20.897338279954383 28.89426698669983 27.440224769568704 22.768169963777083 42 21.967772327742193 29.192426571205242 27.383776099079892 21.456025001972666 43 21.46684938860762 27.96751739826257 27.46575143836203 23.09988177476778 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 768.0 1 1283.0 2 1798.0 3 1824.0 4 1850.0 5 1850.0 6 2409.0 7 2968.0 8 4476.0 9 5984.0 10 9814.0 11 13644.0 12 13644.0 13 29062.0 14 44480.0 15 56579.0 16 68678.0 17 54220.0 18 39762.0 19 39762.0 20 44948.5 21 50135.0 22 45080.5 23 40026.0 24 42543.0 25 45060.0 26 45060.0 27 48902.5 28 52745.0 29 56064.5 30 59384.0 31 63179.0 32 66974.0 33 66974.0 34 76478.0 35 85982.0 36 98617.5 37 111253.0 38 125116.0 39 138979.0 40 138979.0 41 148622.5 42 158266.0 43 169816.5 44 181367.0 45 202992.5 46 224618.0 47 224618.0 48 267074.0 49 309530.0 50 300691.0 51 291852.0 52 250260.5 53 208669.0 54 208669.0 55 192380.0 56 176091.0 57 166657.5 58 157224.0 59 144765.5 60 132307.0 61 132307.0 62 112578.5 63 92850.0 64 80059.5 65 67269.0 66 56795.5 67 46322.0 68 46322.0 69 38016.5 70 29711.0 71 26430.5 72 23150.0 73 18498.0 74 13846.0 75 13846.0 76 10710.0 77 7574.0 78 6527.5 79 5481.0 80 4224.5 81 2968.0 82 2968.0 83 2540.0 84 2112.0 85 1721.0 86 1330.0 87 1343.5 88 1357.0 89 1357.0 90 940.0 91 523.0 92 408.5 93 294.0 94 281.0 95 268.0 96 268.0 97 152.5 98 37.0 99 38.5 100 40.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2965526.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.41315891854346 #Duplication Level Percentage of deduplicated Percentage of total 1 85.05537583348666 43.729655546034905 2 7.700490425807279 7.918130760255039 3 2.505470669170374 3.8644248503941756 4 1.2440926777982495 2.5585093821215072 5 0.7653444478430328 1.967438786218937 6 0.5194359016691658 1.6023504336308239 7 0.34085193168807043 1.22669921720999 8 0.2667444003633324 1.0971337797209273 9 0.21106334288561257 0.9766289870691326 >10 1.208869427162893 11.231963581400752 >50 0.09067701770866265 3.238283706286355 >100 0.07452723623127154 7.925657633962178 >500 0.010141814596821484 3.5356185242933593 >1k 0.006256314199317599 5.450932858116336 >5k 4.6099157258129667E-4 1.5433096918821596 >10k+ 1.9756781682055575E-4 2.1332622614035555 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 30426 1.0259899930062997 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20058 0.6763724209465707 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12521 0.4222185204243699 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 8089 0.2727677990346401 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 8022 0.2705085033818621 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7176 0.2419806806617106 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 5892 0.1986831341219062 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 5888 0.1985482507993523 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 5409 0.18239597292352183 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 5105 0.17214484040942482 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4421 0.14907979225270662 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4102 0.13832284727903243 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3960 0.13353448932836873 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 3789 0.12776822728918916 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 3597 0.1212938278066016 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 3452 0.11640430736402244 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 2967 0.10004970450436111 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.372083063847695E-5 0.0 3 0.0 0.0 0.0 3.372083063847695E-5 0.0 4 0.0 0.0 0.0 3.372083063847695E-5 0.0 5 0.0 0.0 0.0 3.372083063847695E-5 0.0 6 0.0 0.0 0.0 3.372083063847695E-5 0.0 7 0.0 0.0 0.0 3.372083063847695E-5 0.0 8 0.0 0.0 0.0 3.372083063847695E-5 0.0 9 0.0 0.0 0.0 3.372083063847695E-5 3.372083063847695E-5 10 0.0 0.0 0.0 1.0116249191543085E-4 3.372083063847695E-5 11 3.372083063847695E-5 0.0 0.0 2.3604581446933867E-4 3.372083063847695E-5 12 3.372083063847695E-5 0.0 0.0 2.697666451078156E-4 3.372083063847695E-5 13 3.372083063847695E-5 0.0 0.0 3.034874757462926E-4 3.372083063847695E-5 14 3.372083063847695E-5 0.0 0.0 5.058124595771542E-4 1.348833225539078E-4 15 3.372083063847695E-5 0.0 0.0 9.104624272388776E-4 1.348833225539078E-4 16 6.74416612769539E-5 0.0 0.0 0.002056970668947094 1.6860415319238476E-4 17 6.74416612769539E-5 0.0 0.0 0.003304641402570741 1.6860415319238476E-4 18 6.74416612769539E-5 0.0 0.0 0.004012778845978757 1.6860415319238476E-4 19 6.74416612769539E-5 0.0 0.0 0.006373236990672144 1.6860415319238476E-4 20 6.74416612769539E-5 0.0 0.0 0.008025557691957515 1.6860415319238476E-4 21 6.74416612769539E-5 0.0 0.0 0.013859261392414028 2.023249838308617E-4 22 6.74416612769539E-5 0.0 0.0 0.022829002342248897 2.023249838308617E-4 23 6.74416612769539E-5 0.0 0.0 0.04147662168532665 2.3604581446933867E-4 24 6.74416612769539E-5 0.0 0.0 0.07846837289573587 2.697666451078156E-4 25 6.74416612769539E-5 0.0 0.0 0.10160086271373106 2.697666451078156E-4 26 6.74416612769539E-5 0.0 0.0 0.13262402690112984 2.697666451078156E-4 27 6.74416612769539E-5 0.0 0.0 0.17892272736775872 2.697666451078156E-4 28 6.74416612769539E-5 0.0 0.0 0.2526701839741078 2.697666451078156E-4 29 6.74416612769539E-5 0.0 0.0 0.32044905355744646 2.697666451078156E-4 30 6.74416612769539E-5 0.0 0.0 0.4206336413843615 2.697666451078156E-4 31 6.74416612769539E-5 0.0 0.0 0.6113923803062256 2.697666451078156E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGTTAT 500 0.0 17.76 1 GGTTATC 500 0.0 17.76 2 TATAACG 160 3.45608E-11 17.34375 2 GTACTAT 155 4.0199666E-10 16.709677 6 TAGAGTG 335 0.0 16.567163 5 CCGATAA 365 0.0 15.71233 9 GTTATCT 595 0.0 15.546218 3 TAACGAA 360 0.0 15.416666 13 CGAACGT 265 0.0 15.358491 4 CGATAAC 365 0.0 15.205481 10 CGAACGA 370 0.0 15.0 16 TCGTTAC 285 0.0 14.929824 23 TATCACG 150 8.114512E-8 14.8 2 CGTTTAC 125 2.9623789E-6 14.799999 1 TTATCTA 615 0.0 14.739838 4 CGTTACG 265 0.0 14.6603775 24 ACGAACG 395 0.0 14.518989 15 AGTACTC 1390 0.0 14.507195 5 AACGAAC 385 0.0 14.415584 14 TATCTAG 835 0.0 14.401197 1 >>END_MODULE