##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727093.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2713024 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.097212925503054 31.0 31.0 34.0 28.0 34.0 2 31.34827557736312 31.0 31.0 34.0 28.0 34.0 3 31.441802947559623 31.0 31.0 34.0 28.0 34.0 4 35.259301797551366 37.0 35.0 37.0 33.0 37.0 5 34.70688722252365 35.0 35.0 37.0 32.0 37.0 6 34.72955860324125 35.0 35.0 37.0 32.0 37.0 7 34.68413217133354 35.0 35.0 37.0 32.0 37.0 8 34.62001957962775 35.0 35.0 37.0 31.0 37.0 9 36.39159476657781 38.0 35.0 39.0 32.0 39.0 10 36.09038143414876 37.0 35.0 39.0 32.0 39.0 11 36.23540079262108 38.0 35.0 39.0 32.0 39.0 12 36.085361942983184 37.0 35.0 39.0 32.0 39.0 13 36.24787948798094 38.0 35.0 39.0 32.0 39.0 14 37.16114564412257 39.0 36.0 40.0 32.0 41.0 15 37.160436840956805 39.0 36.0 40.0 32.0 41.0 16 37.09426308060673 39.0 36.0 40.0 32.0 41.0 17 36.99116373463707 38.0 36.0 40.0 31.0 41.0 18 37.0015208122007 38.0 36.0 40.0 31.0 41.0 19 37.039923347526596 39.0 36.0 40.0 31.0 41.0 20 36.89664706246609 39.0 36.0 40.0 31.0 41.0 21 36.88863976138803 39.0 36.0 40.0 31.0 41.0 22 36.77419329869548 39.0 36.0 40.0 31.0 41.0 23 36.704188020452456 38.0 36.0 40.0 31.0 41.0 24 36.577299353046634 38.0 35.0 40.0 30.0 41.0 25 36.55176990693779 38.0 35.0 40.0 30.0 41.0 26 36.36081767061405 38.0 35.0 40.0 30.0 41.0 27 36.1361499197943 38.0 35.0 40.0 29.0 41.0 28 36.00508620638815 38.0 34.0 40.0 29.0 41.0 29 35.90684269656295 38.0 34.0 40.0 29.0 41.0 30 35.840469159137555 38.0 34.0 40.0 29.0 41.0 31 35.79817244521243 38.0 34.0 40.0 29.0 41.0 32 35.68299764395744 38.0 34.0 40.0 28.0 41.0 33 35.65858208405086 38.0 34.0 40.0 28.0 41.0 34 35.65227399389021 38.0 34.0 40.0 28.0 41.0 35 35.53762038227454 38.0 34.0 40.0 27.0 41.0 36 35.44422902266991 38.0 34.0 40.0 27.0 41.0 37 35.27756481328584 38.0 34.0 40.0 27.0 41.0 38 35.21972934997995 38.0 34.0 40.0 27.0 41.0 39 35.105045145195916 38.0 33.0 40.0 26.0 41.0 40 35.03145383159161 38.0 33.0 40.0 26.0 41.0 41 34.965714273076834 38.0 33.0 40.0 26.0 41.0 42 34.9079606372815 38.0 33.0 40.0 26.0 41.0 43 33.55702750878724 36.0 31.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 5.0 11 2.0 12 1.0 13 6.0 14 3.0 15 11.0 16 25.0 17 48.0 18 140.0 19 339.0 20 804.0 21 1586.0 22 3124.0 23 5331.0 24 8867.0 25 14558.0 26 21990.0 27 32070.0 28 45923.0 29 62633.0 30 82882.0 31 106308.0 32 135068.0 33 169376.0 34 214487.0 35 274795.0 36 356741.0 37 467121.0 38 534782.0 39 173998.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 41.24394034111014 19.58132327616711 13.420227760609563 25.754508622113185 2 18.66533432804133 21.275005307730417 35.403593923238425 24.656066440989832 3 20.191454259158785 22.885496036894622 30.091624696279872 26.83142500766672 4 15.573839376282702 16.204353518435514 33.80710970489019 34.41469740039159 5 15.456811292491333 35.67034423580477 33.82402809558633 15.048816376117571 6 35.193643697954755 34.34392766153193 15.126110200278362 15.336318440234956 7 28.861558172725342 30.376251739756082 21.46578872873959 19.296401358778986 8 25.94665583496497 35.30256274916845 19.724337123446016 19.02644429242056 9 26.313773855299473 15.036947701162983 19.872032094076573 38.77724634946097 10 17.185841334245477 26.778495140477933 33.200517208841504 22.835146316435093 11 35.421581231865254 21.927634993276875 21.522809971456205 21.127973803401666 12 21.086728314972518 24.889754016182682 30.5237255549527 23.4997921138921 13 30.613477801891907 20.018068398952607 24.546225908801397 24.822227890354085 14 22.056273737349912 20.806524380175038 25.888491955839683 31.24870992663537 15 24.951161508339034 27.675649017480126 22.866108077186194 24.507081396994646 16 24.19532595362223 26.30337954990446 25.00762986247081 24.493664634002503 17 23.76248791016961 26.45125881672997 25.784954353518437 24.001298919581988 18 23.891790120544453 25.553404614186974 26.55339576796962 24.001409497298955 19 24.701145290273878 25.435528767898845 26.819998643580007 23.043327298247267 20 24.224186737750937 25.214594489396337 26.806213288197966 23.755005484654763 21 23.865362046189052 25.551082482130642 27.066513233941166 23.51704223773914 22 24.38408211648699 25.187097497110233 26.3575257719799 24.07129461442287 23 23.84929141798967 25.439546424948695 26.456787702578378 24.254374454483262 24 23.835727218041566 25.393251220777994 26.486864841593732 24.284156719586704 25 24.3367179943856 25.170473980326015 26.370094772475287 24.122713252813096 26 23.93001315137647 25.404567007147744 26.643148014908824 24.02227182656696 27 24.18655345474275 25.818717416432733 26.165415418367104 23.82931371045741 28 23.957030973555707 25.732761671109433 26.18432420796867 24.125883147366185 29 23.86783161520134 25.92442971385436 26.589554681418225 23.618183989526077 30 24.2789595668892 25.66357687952631 26.271459448939634 23.786004104644853 31 24.04280242268406 25.263138107145384 26.705366410322945 23.98869305984761 32 23.640889280743554 25.695349543535183 26.509643851289187 24.15411732443207 33 23.706867318534595 25.254623622938833 26.500023589912953 24.538485468613622 34 24.071626347573776 25.2028732513977 26.86474575971315 23.860754641315374 35 23.87037490269161 25.244008162109882 26.78929489750183 24.09632203769668 36 23.748481399353636 24.962182420796868 26.97031062017881 24.319025559670685 37 23.526957373027294 24.675085808308367 27.44103996131254 24.356916857351795 38 23.411956547380342 24.52993412516808 27.70465723856479 24.353452088886794 39 23.050109398221323 24.53922265339341 28.148184461324337 24.262483487060933 40 23.34649453893515 24.38209171758156 28.14729983958859 24.124113903894695 41 22.84458228161638 24.526358778986104 28.21607917954283 24.412979759854686 42 22.52950950673492 24.829747175107926 28.16255956453021 24.47818375362695 43 22.478791193885495 24.503506050812675 28.038196492179946 24.97950626312189 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2041.0 1 1693.0 2 1345.0 3 2238.5 4 3132.0 5 3132.0 6 3747.0 7 4362.0 8 4084.0 9 3806.0 10 5306.5 11 6807.0 12 6807.0 13 10549.0 14 14291.0 15 17532.5 16 20774.0 17 19371.5 18 17969.0 19 17969.0 20 20865.5 21 23762.0 22 21705.0 23 19648.0 24 22762.5 25 25877.0 26 25877.0 27 31048.0 28 36219.0 29 41677.0 30 47135.0 31 54575.0 32 62015.0 33 62015.0 34 71189.5 35 80364.0 36 91414.5 37 102465.0 38 114741.5 39 127018.0 40 127018.0 41 140539.5 42 154061.0 43 168465.0 44 182869.0 45 196410.5 46 209952.0 47 209952.0 48 221893.0 49 233834.0 50 238514.0 51 243194.0 52 240344.0 53 237494.0 54 237494.0 55 225153.0 56 212812.0 57 197369.5 58 181927.0 59 165236.5 60 148546.0 61 148546.0 62 129111.5 63 109677.0 64 92407.0 65 75137.0 66 61872.5 67 48608.0 68 48608.0 69 39515.5 70 30423.0 71 24529.0 72 18635.0 73 14986.5 74 11338.0 75 11338.0 76 9137.5 77 6937.0 78 5554.0 79 4171.0 80 3238.5 81 2306.0 82 2306.0 83 1740.0 84 1174.0 85 865.0 86 556.0 87 405.5 88 255.0 89 255.0 90 158.5 91 62.0 92 39.5 93 17.0 94 12.0 95 7.0 96 7.0 97 4.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2713024.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.35531127405257 #Duplication Level Percentage of deduplicated Percentage of total 1 83.71449949317321 53.87472673034678 2 8.570771481628112 11.031493331178998 3 2.8984841707981754 5.595985531038923 4 1.3832443459731598 3.560764818127039 5 0.8248217237593323 2.654082938906621 6 0.5449789807702908 2.1043375167172784 7 0.3755240165351524 1.6916875482501537 8 0.276617441504124 1.4241441241463941 9 0.21507593210079892 1.245715070211352 >10 1.1443871599042916 12.72921089033867 >50 0.0412868730523823 1.7678109995500366 >100 0.009621062109130494 0.9315420642607257 >500 1.1455311531494764E-4 0.04548586559786225 >1k 4.00935903592506E-4 0.4661379710999714 >5k 1.7182967296821685E-4 0.8768746002291017 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 9273 0.3417957231487816 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 8348 0.3077009270835791 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6168 0.22734778608666933 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4651 0.1714323205397372 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 3.685923898940813E-5 0.0 0.0 0.0 0.0 3 3.685923898940813E-5 0.0 0.0 0.0 0.0 4 3.685923898940813E-5 0.0 0.0 0.0 3.685923898940813E-5 5 3.685923898940813E-5 0.0 0.0 0.0 3.685923898940813E-5 6 3.685923898940813E-5 0.0 0.0 0.0 3.685923898940813E-5 7 3.685923898940813E-5 0.0 0.0 0.0 3.685923898940813E-5 8 3.685923898940813E-5 0.0 0.0 0.0 3.685923898940813E-5 9 7.371847797881626E-5 0.0 0.0 0.0 1.1057771696822438E-4 10 1.1057771696822438E-4 0.0 0.0 0.0 1.4743695595763253E-4 11 1.4743695595763253E-4 0.0 0.0 0.0 1.4743695595763253E-4 12 1.8429619494704063E-4 0.0 0.0 0.0 1.8429619494704063E-4 13 1.8429619494704063E-4 0.0 0.0 0.0 1.8429619494704063E-4 14 1.8429619494704063E-4 0.0 0.0 3.685923898940813E-5 1.8429619494704063E-4 15 1.8429619494704063E-4 0.0 0.0 3.685923898940813E-5 2.580146729258569E-4 16 1.8429619494704063E-4 0.0 0.0 3.685923898940813E-5 2.580146729258569E-4 17 1.8429619494704063E-4 0.0 0.0 1.4743695595763253E-4 2.580146729258569E-4 18 1.8429619494704063E-4 0.0 0.0 1.4743695595763253E-4 2.9487391191526506E-4 19 1.8429619494704063E-4 0.0 0.0 1.4743695595763253E-4 2.9487391191526506E-4 20 1.8429619494704063E-4 0.0 0.0 2.2115543393644876E-4 2.9487391191526506E-4 21 1.8429619494704063E-4 0.0 0.0 4.054516288834894E-4 2.9487391191526506E-4 22 2.2115543393644876E-4 0.0 0.0 7.003255407987544E-4 2.9487391191526506E-4 23 2.2115543393644876E-4 0.0 0.0 0.0010320586917034276 3.6859238989408127E-4 24 2.2115543393644876E-4 3.685923898940813E-5 0.0 0.0018061027104809982 3.6859238989408127E-4 25 2.2115543393644876E-4 3.685923898940813E-5 0.0 0.0026907244462267936 3.6859238989408127E-4 26 2.2115543393644876E-4 3.685923898940813E-5 0.0 0.0053077304144747706 3.6859238989408127E-4 27 2.2115543393644876E-4 3.685923898940813E-5 0.0 0.020825470029015594 3.6859238989408127E-4 28 2.2115543393644876E-4 3.685923898940813E-5 0.0 0.06465110518742186 3.6859238989408127E-4 29 2.2115543393644876E-4 3.685923898940813E-5 0.0 0.13449936307235028 4.054516288834894E-4 30 2.2115543393644876E-4 3.685923898940813E-5 0.0 0.218649005685169 4.054516288834894E-4 31 2.2115543393644876E-4 3.685923898940813E-5 0.0 0.4735675025359156 4.054516288834894E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3695 0.0 18.124493 1 GTATACG 100 5.883723E-6 16.65 1 TCTTATA 2700 0.0 15.074074 37 CTTATAC 1635 0.0 15.048929 37 CTCTTAT 4210 0.0 13.446555 37 GTATCAA 5070 0.0 13.063116 2 TACCCGT 145 1.3734916E-5 12.75862 6 TTAGTAC 165 3.80834E-6 12.333333 3 GTATAGG 325 0.0 11.953847 1 GTCTATA 190 1.4356665E-6 11.684211 1 TAGACTG 320 5.456968E-12 11.562501 5 TATTCCG 145 1.9400632E-4 11.4827585 5 GATATAA 230 1.0246367E-7 11.26087 1 TATAGGG 230 1.0246367E-7 11.26087 2 GTATTAC 200 2.6605321E-6 11.099999 1 TAGTACT 255 3.637615E-8 10.882353 4 GTAAGAG 1210 0.0 10.855371 3 AGGCCGT 290 1.895387E-9 10.844828 6 CTTACAC 465 0.0 10.741936 3 ACCCGAC 1035 0.0 10.724638 11 >>END_MODULE