##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727092.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8208025 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.00976190983824 33.0 31.0 34.0 30.0 34.0 2 32.228202033985035 33.0 31.0 34.0 30.0 34.0 3 32.33344074853573 34.0 31.0 34.0 30.0 34.0 4 35.94886723663731 37.0 35.0 37.0 35.0 37.0 5 35.65738773943793 37.0 35.0 37.0 33.0 37.0 6 35.67551463354461 37.0 35.0 37.0 33.0 37.0 7 35.63570907739682 37.0 35.0 37.0 33.0 37.0 8 35.6047956725278 37.0 35.0 37.0 33.0 37.0 9 37.42754694338772 39.0 37.0 39.0 35.0 39.0 10 37.249073315444335 39.0 37.0 39.0 34.0 39.0 11 37.33887603899842 39.0 37.0 39.0 34.0 39.0 12 37.24616372391653 39.0 37.0 39.0 34.0 39.0 13 37.31960502069621 39.0 37.0 39.0 34.0 39.0 14 38.49803040317251 40.0 38.0 41.0 34.0 41.0 15 38.451540535025174 40.0 38.0 41.0 34.0 41.0 16 38.405828929614614 40.0 38.0 41.0 34.0 41.0 17 38.371045897155525 40.0 38.0 41.0 34.0 41.0 18 38.37513092369967 40.0 38.0 41.0 34.0 41.0 19 38.42268475059469 40.0 38.0 41.0 34.0 41.0 20 38.34181450470729 40.0 38.0 41.0 34.0 41.0 21 38.28057431598953 40.0 38.0 41.0 34.0 41.0 22 38.21570292488144 40.0 38.0 41.0 34.0 41.0 23 38.15281325288361 40.0 38.0 41.0 33.0 41.0 24 38.07325867063027 40.0 37.0 41.0 33.0 41.0 25 38.039176781259805 40.0 37.0 41.0 33.0 41.0 26 37.87202305061205 40.0 37.0 41.0 33.0 41.0 27 37.735319519616475 40.0 37.0 41.0 33.0 41.0 28 37.648852312218835 40.0 37.0 41.0 32.0 41.0 29 37.550657923191025 39.0 37.0 41.0 32.0 41.0 30 37.48516189948252 39.0 37.0 41.0 32.0 41.0 31 37.424948632588226 39.0 36.0 41.0 32.0 41.0 32 37.31091340486901 39.0 36.0 41.0 32.0 41.0 33 37.22526892888362 39.0 36.0 41.0 31.0 41.0 34 37.17377907596529 39.0 36.0 41.0 31.0 41.0 35 37.09003993043393 39.0 36.0 41.0 31.0 41.0 36 36.95933711215548 39.0 36.0 40.0 31.0 41.0 37 36.86707326061994 39.0 35.0 40.0 31.0 41.0 38 36.811815753485156 39.0 35.0 40.0 30.0 41.0 39 36.69419598502685 39.0 35.0 40.0 30.0 41.0 40 36.591404509611024 39.0 35.0 40.0 30.0 41.0 41 36.520774973273106 39.0 35.0 40.0 30.0 41.0 42 36.36537120683721 39.0 35.0 40.0 30.0 41.0 43 35.06363906055354 38.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 14.0 10 20.0 11 18.0 12 13.0 13 9.0 14 6.0 15 27.0 16 45.0 17 82.0 18 212.0 19 477.0 20 1068.0 21 2264.0 22 4222.0 23 7615.0 24 13082.0 25 21034.0 26 32532.0 27 49116.0 28 70815.0 29 99014.0 30 133923.0 31 177599.0 32 233570.0 33 307102.0 34 411159.0 35 562888.0 36 805575.0 37 1235876.0 38 2113077.0 39 1925570.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.20390106024287 18.17018101187557 12.765177981304882 25.860739946576672 2 18.563783614206827 20.669235291071846 35.63128767273491 25.13569342198641 3 20.282601478431168 22.27069240164351 29.793561788615406 27.65314433130991 4 15.20059941337898 15.426280987204596 33.518160580651255 35.85495901876517 5 15.788901715089807 35.24282638028027 33.45525872545466 15.513013179175259 6 35.61973800031067 33.5558919472102 14.97256648219273 15.851803570286396 7 29.36779554155841 29.96295698417098 21.16259392484794 19.50665354942267 8 26.591792788155495 34.573457074022066 19.45400994758179 19.380740190240648 9 26.61150520374877 14.881996582612746 19.64415313062521 38.862345083013274 10 17.73642258643218 26.34693485948203 32.41488665056454 23.50175590352125 11 35.44414155658639 21.786422434142196 21.132282126333678 21.637153882937735 12 21.607975121908133 24.920282284715263 29.96929224752605 23.502450345850555 13 31.17166431632457 19.55941898325115 24.226534397738796 25.042382302685485 14 22.35096749827151 20.65746632106993 25.79363488780797 31.197931292850594 15 25.384888569418347 27.18457850700991 22.770142634799477 24.66039028877227 16 24.344309380149305 25.86775746906229 24.905979209371317 24.88195394141709 17 24.036988191434602 26.085081368538717 25.648155311417792 24.229775128608892 18 24.137450848407504 25.064044030080318 26.420618845581 24.377886275931175 19 25.116188120772048 24.951654021521623 26.74419242144121 23.187965436265117 20 24.548536340959 24.967077951151463 26.582058412346456 23.90232729554308 21 24.12789922057986 25.330344388570943 26.818217537105454 23.723538853743744 22 24.59825597509754 25.04583014793449 26.143719104169392 24.212194772798572 23 24.03960757916795 25.1888487181752 26.346776477898153 24.424767224758696 24 24.003703692422963 25.25158000858915 26.420009685643013 24.32470661334487 25 24.40657770901039 24.944648682234764 26.227527328437716 24.42124628031713 26 23.94049725725738 25.39285638140722 26.543437672278046 24.123208689057353 27 24.302801221974835 25.600397172279564 26.250577940491166 23.84622366525443 28 24.11316973327932 25.60980260172209 26.152539740071457 24.12448792492713 29 23.950938258594483 25.82004806271911 26.496836937022 23.732176741664407 30 24.146368949899642 25.64532880930553 26.326028490410298 23.882273750384535 31 24.064193274265126 25.120549705928042 26.582935602657155 24.23232141714968 32 23.531763122066515 25.627005278370863 26.53205856463644 24.309173034926186 33 23.743726414088652 25.15752571416388 26.467792191178756 24.63095568056871 34 23.997478077856734 25.13334206462578 26.79693348887217 24.07224636864532 35 23.745395512318737 25.168514959445176 26.793704941200836 24.292384587035247 36 23.5597357464189 24.840238668863705 27.1088477435193 24.491177841198095 37 23.305192174731438 24.475632079580652 27.44561572363632 24.77356002205159 38 23.235309346645508 24.397537775530655 27.84365301031612 24.523499867507713 39 22.85832462742255 24.30790598225517 28.346636371112417 24.487133019209857 40 23.090170899820603 24.253166870227613 28.39055680264132 24.266105427310467 41 22.564880102095206 24.361353675214197 28.547512952263183 24.526253270427418 42 22.18021996765361 24.689995461758464 28.444686754730885 24.685097815857045 43 22.065710082510716 24.366738649066004 28.34310324347209 25.22444802495119 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 5478.0 1 4583.5 2 3689.0 3 7168.5 4 10648.0 5 10648.0 6 13028.5 7 15409.0 8 14473.5 9 13538.0 10 19618.0 11 25698.0 12 25698.0 13 41006.5 14 56315.0 15 71623.0 16 86931.0 17 78314.5 18 69698.0 19 69698.0 20 75480.0 21 81262.0 22 67983.0 23 54704.0 24 63027.5 25 71351.0 26 71351.0 27 84712.0 28 98073.0 29 112252.0 30 126431.0 31 146142.0 32 165853.0 33 165853.0 34 190364.5 35 214876.0 36 246799.0 37 278722.0 38 317319.5 39 355917.0 40 355917.0 41 396026.5 42 436136.0 43 481265.0 44 526394.0 45 569747.0 46 613100.0 47 613100.0 48 652479.5 49 691859.0 50 711473.0 51 731087.0 52 726739.0 53 722391.0 54 722391.0 55 687980.0 56 653569.0 57 609982.5 58 566396.0 59 518350.5 60 470305.0 61 470305.0 62 412885.5 63 355466.0 64 302586.5 65 249707.0 66 208433.0 67 167159.0 68 167159.0 69 137965.5 70 108772.0 71 89842.0 72 70912.0 73 57864.5 74 44817.0 75 44817.0 76 36494.0 77 28171.0 78 22712.0 79 17253.0 80 13496.0 81 9739.0 82 9739.0 83 7610.0 84 5481.0 85 4145.5 86 2810.0 87 2054.0 88 1298.0 89 1298.0 90 861.0 91 424.0 92 272.5 93 121.0 94 86.5 95 52.0 96 52.0 97 30.0 98 8.0 99 6.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 8208025.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.27572060924105 #Duplication Level Percentage of deduplicated Percentage of total 1 79.18199291563185 40.601137460248424 2 10.469413383829647 10.736534312237959 3 3.702612493568841 5.695623712335635 4 1.7606513898086884 3.6111467501640897 5 1.038176111771697 2.661661412519687 6 0.6908530186697686 2.1254391820417102 7 0.5007537470686096 1.7973556460104407 8 0.3740145280680681 1.5342291556012324 9 0.2791556244300926 1.288251522429809 >10 1.8040950041451576 17.415973067966878 >50 0.1398808528262047 4.8857464928688366 >100 0.05554485752028083 4.793375239832498 >500 0.002261222709533705 0.7533489016168186 >1k 4.044979770992357E-4 0.38025435076318675 >5k 9.517598724794802E-5 0.28243037747871796 >10k+ 9.517598724794802E-5 1.4374924158839477 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 37213 0.45337337544659034 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 34707 0.422842279354656 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 26998 0.3289220001157404 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18904 0.2303111893543209 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.65495962792511E-5 2 0.0 0.0 0.0 1.2183198759750366E-5 3.65495962792511E-5 3 0.0 0.0 0.0 1.2183198759750366E-5 3.65495962792511E-5 4 0.0 0.0 0.0 1.2183198759750366E-5 3.65495962792511E-5 5 2.4366397519500732E-5 1.2183198759750366E-5 0.0 1.2183198759750366E-5 3.65495962792511E-5 6 2.4366397519500732E-5 1.2183198759750366E-5 0.0 1.2183198759750366E-5 1.096487888377533E-4 7 2.4366397519500732E-5 1.2183198759750366E-5 0.0 1.2183198759750366E-5 1.096487888377533E-4 8 6.091599379875183E-5 1.2183198759750366E-5 0.0 1.2183198759750366E-5 1.3401518635725403E-4 9 6.091599379875183E-5 1.2183198759750366E-5 0.0 3.65495962792511E-5 1.5838158387675475E-4 10 8.528239131825257E-5 1.2183198759750366E-5 0.0 8.528239131825257E-5 1.7056478263650514E-4 11 1.096487888377533E-4 1.2183198759750366E-5 0.0 1.096487888377533E-4 1.9493118015600586E-4 12 1.096487888377533E-4 2.4366397519500732E-5 0.0 1.461983851170044E-4 1.9493118015600586E-4 13 1.3401518635725403E-4 2.4366397519500732E-5 0.0 1.7056478263650514E-4 2.0711437891575622E-4 14 1.827479813962555E-4 2.4366397519500732E-5 0.0 2.4366397519500732E-4 3.0457996899375917E-4 15 2.0711437891575622E-4 3.65495962792511E-5 0.0 3.289463665132599E-4 3.65495962792511E-4 16 2.4366397519500732E-4 3.65495962792511E-5 0.0 5.482439441887665E-4 4.1422875783151243E-4 17 2.4366397519500732E-4 3.65495962792511E-5 0.0 8.284575156630249E-4 4.1422875783151243E-4 18 2.802135714742584E-4 3.65495962792511E-5 0.0 9.62472702020279E-4 4.385951553510132E-4 19 2.802135714742584E-4 3.65495962792511E-5 0.0 0.0012183198759750367 4.385951553510132E-4 20 2.923967702340088E-4 4.8732795039001464E-5 0.0 0.0017543806214040528 4.385951553510132E-4 21 3.167631677535095E-4 4.8732795039001464E-5 0.0 0.0030457996899375915 4.385951553510132E-4 22 3.289463665132599E-4 4.8732795039001464E-5 0.0 0.004617432329945389 4.385951553510132E-4 23 3.289463665132599E-4 4.8732795039001464E-5 0.0 0.005787019410881424 6.091599379875183E-4 24 3.289463665132599E-4 4.8732795039001464E-5 0.0 0.008053094380194992 6.213431367472687E-4 25 3.289463665132599E-4 4.8732795039001464E-5 0.0 0.009880574194157547 6.213431367472687E-4 26 3.289463665132599E-4 4.8732795039001464E-5 0.0 0.014120327362550674 6.33526335507019E-4 27 3.289463665132599E-4 4.8732795039001464E-5 0.0 0.03908370162127917 6.457095342667695E-4 28 3.289463665132599E-4 4.8732795039001464E-5 0.0 0.1100873839931043 6.457095342667695E-4 29 3.289463665132599E-4 4.8732795039001464E-5 0.0 0.2246703683285565 6.457095342667695E-4 30 3.289463665132599E-4 6.091599379875183E-5 0.0 0.36034246971713657 6.457095342667695E-4 31 3.289463665132599E-4 6.091599379875183E-5 0.0 0.7216230457387739 6.457095342667695E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 6865 0.0 15.576111 37 GGTATCA 21895 0.0 13.476821 1 TCTTATA 10615 0.0 13.454545 37 TATACCG 340 0.0 13.058824 5 ATACCCG 720 0.0 12.847222 5 TATACAC 2995 0.0 12.106844 37 CTCTTAT 16130 0.0 12.100123 37 TACTTAC 1720 0.0 11.831395 31 TACCCGT 790 0.0 11.474684 6 TATACTG 1070 0.0 11.411215 5 ACCCGTT 910 0.0 10.978023 7 GGAGTGT 2720 0.0 10.950368 6 AGTGTAC 2205 0.0 10.739229 27 ATTATAC 1120 0.0 10.736607 3 TCGTTAC 935 0.0 10.684491 23 TCTCTTA 22595 0.0 10.578446 37 GTATCAA 28395 0.0 10.424371 2 GTACTTA 2035 0.0 10.363635 30 TACACCG 590 0.0 10.347458 5 GAGTGTC 2350 0.0 10.155319 7 >>END_MODULE