##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727089.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2666562 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.78270634622409 31.0 30.0 31.0 26.0 34.0 2 30.01328752153522 31.0 30.0 31.0 26.0 34.0 3 30.06418976944845 31.0 30.0 31.0 26.0 34.0 4 33.72636188470398 35.0 33.0 37.0 28.0 37.0 5 31.995475447411312 35.0 30.0 35.0 22.0 37.0 6 32.208620313347296 35.0 32.0 35.0 25.0 37.0 7 32.22485507556171 35.0 32.0 35.0 25.0 37.0 8 32.11892616785209 35.0 32.0 35.0 25.0 37.0 9 33.450412178678015 35.0 32.0 38.0 26.0 39.0 10 32.88681118233891 35.0 31.0 37.0 25.0 39.0 11 33.29502220462153 35.0 32.0 37.0 25.0 39.0 12 32.98385561633294 35.0 31.0 37.0 25.0 39.0 13 33.266720593783305 35.0 32.0 37.0 25.0 39.0 14 33.77361523939815 36.0 32.0 38.0 25.0 40.0 15 33.737860586028 36.0 32.0 38.0 25.0 40.0 16 33.61488575926605 36.0 31.0 38.0 25.0 40.0 17 33.53484674273465 36.0 31.0 38.0 25.0 40.0 18 33.499187343103216 36.0 31.0 38.0 24.0 40.0 19 33.540205703073845 36.0 31.0 39.0 24.0 40.0 20 33.38581139309718 36.0 31.0 39.0 24.0 40.0 21 33.256411439148984 36.0 31.0 39.0 24.0 40.0 22 33.160940566917255 36.0 31.0 39.0 23.0 40.0 23 33.01406942722502 36.0 30.0 38.0 23.0 40.0 24 32.83128650299524 36.0 30.0 38.0 21.0 40.0 25 32.77715200321612 35.0 30.0 38.0 21.0 40.0 26 32.39682595041855 35.0 30.0 38.0 19.0 40.0 27 32.14923260737984 35.0 30.0 38.0 18.0 40.0 28 31.966041667135435 35.0 29.0 38.0 18.0 40.0 29 31.765994565286686 35.0 29.0 38.0 17.0 40.0 30 31.6331448509354 34.0 29.0 38.0 17.0 40.0 31 31.523486796856776 34.0 28.0 38.0 17.0 40.0 32 31.328124003867153 34.0 27.0 38.0 16.0 40.0 33 31.169779288837088 34.0 27.0 38.0 16.0 40.0 34 31.060662756013173 34.0 27.0 38.0 16.0 40.0 35 30.897500226883906 34.0 27.0 38.0 15.0 40.0 36 30.64683288819086 34.0 26.0 38.0 15.0 40.0 37 30.52821685751166 34.0 26.0 38.0 15.0 40.0 38 30.414010999931747 33.0 26.0 38.0 15.0 40.0 39 30.230094031190724 33.0 25.0 38.0 14.0 40.0 40 30.08479645326079 33.0 25.0 38.0 13.0 40.0 41 29.94343052964829 33.0 25.0 38.0 13.0 40.0 42 29.67697844640402 33.0 25.0 37.0 12.0 39.0 43 28.415589811900116 31.0 23.0 37.0 9.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 22.0 11 38.0 12 78.0 13 183.0 14 399.0 15 808.0 16 1580.0 17 3082.0 18 5490.0 19 9252.0 20 15045.0 21 22627.0 22 32754.0 23 46105.0 24 61949.0 25 80506.0 26 101219.0 27 124040.0 28 147367.0 29 170755.0 30 192275.0 31 211018.0 32 226189.0 33 234056.0 34 232689.0 35 219435.0 36 192748.0 37 160049.0 38 125829.0 39 48970.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.96175599892296 21.707127004734936 14.175181375869004 24.155935620473105 2 20.647297906442827 23.44569524353831 32.895616152934004 23.01139069708486 3 22.247635719701996 24.035180880849573 29.32776361472188 24.389419784726552 4 18.151387441957098 17.262340046846838 32.505300833057696 32.08097167813836 5 15.57424878926498 36.76786813882445 32.64101865998241 15.016864411928168 6 34.80811621856158 35.18958119106175 14.466605314258585 15.535697276118087 7 28.789654993958514 30.90597555954071 21.10939104359846 19.19497840290231 8 26.569230342290933 35.56410839125436 19.082136473856597 18.78452479259811 9 26.761312881530603 14.946474149110353 19.50571559933727 38.78649737002177 10 17.504037033453564 27.678298873230773 32.35927010135148 22.458393991964183 11 35.86948287720293 22.107942736752417 20.981548525779637 21.041025860265012 12 21.325887041066363 25.737072680102695 29.991802178235496 22.945238100595446 13 31.27660260665231 20.085300848058285 24.433559017191424 24.204537528097976 14 22.119268181276112 21.211132536952075 26.11463749952186 30.55496178224995 15 25.319006270996137 27.954347208127917 22.76511853090234 23.961527989973607 16 24.130134607783354 26.47423911388522 25.10986056202706 24.285765716304365 17 23.956352786846885 26.650083515777993 25.79354989683345 23.60001380054167 18 24.09904588755109 25.464324474735633 26.58434343547984 23.85228620223344 19 25.14728703101597 25.28446741534605 27.03203600741329 22.53620954622469 20 24.542650799043862 25.298567968792774 26.840328482892957 23.31845274927041 21 24.15357302774134 25.520989198826054 27.137715155319846 23.187722618112762 22 24.4797608306126 25.41167240814202 26.593268785799847 23.515297975445538 23 24.057756766953105 25.502425970219335 26.77335085402102 23.666466408806546 24 23.988829061540663 25.614330362466724 26.63680799471379 23.760032581278814 25 24.447659570638148 25.28202981967042 26.66137145882976 23.608939150861673 26 24.06341948921495 25.592504505801855 26.803989556590096 23.5400864483931 27 24.40213278371176 25.871927973172948 26.436362627233116 23.289576615882172 28 24.24515162220117 25.905416787608914 26.432949993287234 23.416481596902678 29 24.055956696300328 26.13121315011614 26.66587163546169 23.146958518121835 30 24.303578915472432 25.904629256698325 26.42136203846001 23.370429789369233 31 24.207350138492938 25.441486078328573 26.86980463983211 23.481359143346374 32 23.780620889369906 25.863602646403873 26.681284740426065 23.67449172380016 33 23.993854258779656 25.539664931848577 26.64314574347043 23.823335065901336 34 24.252539412171927 25.516976541329246 26.853491499541356 23.376992546957467 35 24.086857909172934 25.61935555970572 26.71949874032556 23.57428779079579 36 23.928339187313103 25.382383758562522 26.8194401630264 23.869836891097975 37 23.755569906118815 25.162812640396137 27.20698037397968 23.87463707950537 38 23.80747194327377 25.064183769212946 27.284608420880517 23.843735866632766 39 23.397730860936292 25.167425321443865 27.633072098079847 23.801771719539992 40 23.773458108230745 25.027319822303024 27.630934514179685 23.568287555286545 41 23.356029224147047 25.0382702521074 27.605583519153125 24.00011700459243 42 23.210185999800494 25.261103998331937 27.472265786432114 24.056444215435455 43 23.370729801144698 24.89336456455916 27.204317769472453 24.531587864823695 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1938.0 1 1629.0 2 1320.0 3 1929.5 4 2539.0 5 2539.0 6 3461.0 7 4383.0 8 4497.5 9 4612.0 10 6277.5 11 7943.0 12 7943.0 13 13621.5 14 19300.0 15 25476.0 16 31652.0 17 28343.0 18 25034.0 19 25034.0 20 27848.0 21 30662.0 22 26246.5 23 21831.0 24 24342.0 25 26853.0 26 26853.0 27 31273.0 28 35693.0 29 40541.5 30 45390.0 31 52113.5 32 58837.0 33 58837.0 34 67605.5 35 76374.0 36 86822.5 37 97271.0 38 109493.0 39 121715.0 40 121715.0 41 134690.0 42 147665.0 43 161287.0 44 174909.0 45 188077.5 46 201246.0 47 201246.0 48 211762.5 49 222279.0 50 226384.0 51 230489.0 52 227283.0 53 224077.0 54 224077.0 55 213549.0 56 203021.0 57 189564.0 58 176107.0 59 161321.5 60 146536.0 61 146536.0 62 128211.0 63 109886.0 64 93631.5 65 77377.0 66 64653.5 67 51930.0 68 51930.0 69 42700.0 70 33470.0 71 27540.0 72 21610.0 73 17404.0 74 13198.0 75 13198.0 76 10822.0 77 8446.0 78 6750.5 79 5055.0 80 3954.5 81 2854.0 82 2854.0 83 2194.5 84 1535.0 85 1184.5 86 834.0 87 651.5 88 469.0 89 469.0 90 314.5 91 160.0 92 99.5 93 39.0 94 29.0 95 19.0 96 19.0 97 11.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2666562.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 70.75745377448615 #Duplication Level Percentage of deduplicated Percentage of total 1 87.84102862010204 62.15407522090185 2 6.542359149743018 9.258413502280563 3 2.148042423416784 4.55970037441645 4 1.0269371968471468 2.9065384494084947 5 0.5988182697259802 2.118542801972691 6 0.3842590251231251 1.631351412454718 7 0.27951076057565044 1.3844228804632133 8 0.19885850499878238 1.1256577180091816 9 0.15427641397116026 0.9824585607052075 >10 0.7880071148533655 9.6151286038624 >50 0.027789723724330154 1.3197147256145159 >100 0.009367210091851355 1.0426381186570053 >500 2.1302480766784954E-4 0.09616633321978524 >1k 3.1953721147553034E-4 0.3450230983153747 >5k 1.0651240382517677E-4 0.5212275552531961 >10k+ 1.0651240382517677E-4 0.9389406444652897 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 12995 0.4873316277663898 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11922 0.447092548382524 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7584 0.2844111631381532 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6248 0.23430919663596797 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.750147193277336E-5 0.0 0.0 0.0 0.0 2 3.750147193277336E-5 0.0 0.0 0.0 0.0 3 3.750147193277336E-5 0.0 0.0 0.0 0.0 4 3.750147193277336E-5 0.0 0.0 0.0 0.0 5 3.750147193277336E-5 0.0 0.0 0.0 3.750147193277336E-5 6 3.750147193277336E-5 0.0 0.0 0.0 3.750147193277336E-5 7 3.750147193277336E-5 0.0 0.0 3.750147193277336E-5 7.500294386554673E-5 8 3.750147193277336E-5 0.0 0.0 3.750147193277336E-5 7.500294386554673E-5 9 3.750147193277336E-5 0.0 0.0 1.1250441579832008E-4 7.500294386554673E-5 10 3.750147193277336E-5 0.0 0.0 1.5000588773109345E-4 7.500294386554673E-5 11 3.750147193277336E-5 0.0 0.0 1.5000588773109345E-4 7.500294386554673E-5 12 1.1250441579832008E-4 0.0 0.0 1.5000588773109345E-4 7.500294386554673E-5 13 1.1250441579832008E-4 0.0 0.0 1.875073596638668E-4 7.500294386554673E-5 14 1.1250441579832008E-4 0.0 0.0 2.6251030352941355E-4 1.1250441579832008E-4 15 1.1250441579832008E-4 3.750147193277336E-5 0.0 2.6251030352941355E-4 1.5000588773109345E-4 16 1.5000588773109345E-4 3.750147193277336E-5 0.0 3.000117754621869E-4 1.5000588773109345E-4 17 1.5000588773109345E-4 3.750147193277336E-5 0.0 3.750147193277336E-4 1.5000588773109345E-4 18 1.5000588773109345E-4 3.750147193277336E-5 0.0 4.5001766319328033E-4 1.5000588773109345E-4 19 1.5000588773109345E-4 3.750147193277336E-5 0.0 6.750264947899205E-4 1.5000588773109345E-4 20 1.875073596638668E-4 3.750147193277336E-5 0.0 9.37536798319334E-4 1.5000588773109345E-4 21 1.875073596638668E-4 3.750147193277336E-5 0.0 0.0017250677089075746 1.5000588773109345E-4 22 1.875073596638668E-4 3.750147193277336E-5 0.0 0.0026251030352941354 1.5000588773109345E-4 23 1.875073596638668E-4 3.750147193277336E-5 0.0 0.003112622170420189 2.2500883159664017E-4 24 1.875073596638668E-4 3.750147193277336E-5 0.0 0.0043126692722689364 2.2500883159664017E-4 25 1.875073596638668E-4 3.750147193277336E-5 0.0 0.005025197238991631 2.6251030352941355E-4 26 1.875073596638668E-4 3.750147193277336E-5 0.0 0.006825267891764752 2.6251030352941355E-4 27 1.875073596638668E-4 3.750147193277336E-5 0.0 0.01627563881882364 2.6251030352941355E-4 28 1.875073596638668E-4 3.750147193277336E-5 0.0 0.04728935610722721 2.6251030352941355E-4 29 1.875073596638668E-4 3.750147193277336E-5 0.0 0.10219151101680742 2.6251030352941355E-4 30 1.875073596638668E-4 3.750147193277336E-5 0.0 0.17175674145210199 2.6251030352941355E-4 31 1.875073596638668E-4 3.750147193277336E-5 0.0 0.3798149077351286 2.6251030352941355E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5905 0.0 16.385267 1 CTTATAC 1410 0.0 16.138298 37 TAGACGG 80 0.006301496 13.875001 7 ATTACGA 85 0.00940899 13.058823 34 GGGTAAG 955 0.0 12.979057 1 GTATTAG 295 1.8189894E-12 12.542373 1 GTATCAA 7790 0.0 12.372915 2 TAAACGT 105 0.0026451473 12.333333 4 CTCTTAT 3195 0.0 12.101721 37 TCTTATA 2210 0.0 11.970588 37 GATGTGT 950 0.0 11.294737 6 TAGTACG 115 0.00522153 11.26087 2 GTAAGAG 975 0.0 11.194872 3 GTGTATA 680 0.0 11.154411 9 CTTAGAC 405 0.0 10.962963 3 CGACGCG 120 0.0071665505 10.791666 17 TACGCGA 120 0.0071665505 10.791666 18 TACACAG 790 0.0 10.772152 5 TTAGACA 500 0.0 10.73 4 TCGTTAC 295 2.5120244E-9 10.661016 23 >>END_MODULE