SRR2727087.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2727087.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	814712
Sequences flagged as poor quality	0
Sequence length	43
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	8680	1.0654071622855685	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	7839	0.962180500594075	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	5817	0.7139946385962156	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3845	0.4719459146299551	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1462	0.17944991604395172	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1074	0.1318257249187443	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1046	0.1283889276210489	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	845	0.10371763273402135	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	840	0.10310391893086146	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATACCGA	45	0.003824866	20.555555	6
TATAGGG	60	9.233668E-4	18.5	2
CCCTATA	75	2.0663353E-4	17.266666	2
TCTAACG	65	0.0015794003	17.076923	2
CCCCTAT	70	0.0025916242	15.857143	1
GTCCTAT	70	0.0025916242	15.857143	1
GTATAGG	95	7.0556416E-5	15.578948	1
CTTATAC	660	0.0	15.416667	37
CCTATGC	85	5.3617713E-4	15.235293	3
GTAGTAA	85	5.3617713E-4	15.235293	1
ACCCGTT	185	3.0377123E-10	15.0	7
CTTAATA	75	0.0041030417	14.8	2
CGCTCAC	75	0.0041030417	14.8	10
GGTCTAG	100	1.09274326E-4	14.799999	1
TAGAGCA	90	8.270368E-4	14.388888	4
TAGGGTG	90	8.270368E-4	14.388888	5
CTAACAC	105	1.6546977E-4	14.095238	3
TATACTA	105	1.6546977E-4	14.095238	5
TATACAC	290	0.0	14.034483	37
ATACCCG	185	4.8876245E-9	14.0	5