##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727085.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2081882 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.68688379072397 31.0 31.0 34.0 30.0 34.0 2 31.930877446464304 31.0 31.0 34.0 30.0 34.0 3 32.04043168632997 33.0 31.0 34.0 30.0 34.0 4 35.759243319265934 37.0 35.0 37.0 35.0 37.0 5 35.38074444180794 37.0 35.0 37.0 33.0 37.0 6 35.39560407362185 37.0 35.0 37.0 33.0 37.0 7 35.34994442528443 37.0 35.0 37.0 33.0 37.0 8 35.3088465148361 37.0 35.0 37.0 32.0 37.0 9 37.15175740027533 39.0 37.0 39.0 33.0 39.0 10 36.92766016517747 39.0 37.0 39.0 33.0 39.0 11 37.039610314129234 39.0 37.0 39.0 33.0 39.0 12 36.92398608566672 39.0 37.0 39.0 33.0 39.0 13 37.052735937963824 39.0 37.0 39.0 33.0 39.0 14 38.10941926583735 40.0 37.0 41.0 33.0 41.0 15 38.10991208915779 40.0 37.0 41.0 33.0 41.0 16 38.05875116841396 40.0 37.0 41.0 33.0 41.0 17 37.96586357920382 40.0 37.0 41.0 33.0 41.0 18 37.99209321181508 40.0 37.0 41.0 33.0 41.0 19 38.034580249985346 40.0 37.0 41.0 33.0 41.0 20 37.92247255127812 40.0 37.0 41.0 33.0 41.0 21 37.91636509658088 40.0 37.0 41.0 33.0 41.0 22 37.820893307113465 39.0 37.0 41.0 33.0 41.0 23 37.769290958853574 39.0 37.0 41.0 33.0 41.0 24 37.670971745756965 39.0 37.0 41.0 32.0 41.0 25 37.65051477461259 39.0 37.0 41.0 32.0 41.0 26 37.517611949188286 39.0 37.0 40.0 32.0 41.0 27 37.33891738340598 39.0 36.0 40.0 32.0 41.0 28 37.23846548459519 39.0 36.0 40.0 31.0 41.0 29 37.154441029799 39.0 36.0 40.0 31.0 41.0 30 37.09001422751145 39.0 36.0 40.0 31.0 41.0 31 37.041176204991444 39.0 36.0 40.0 31.0 41.0 32 36.93677499493247 39.0 36.0 40.0 31.0 41.0 33 36.89023441290141 39.0 35.0 40.0 31.0 41.0 34 36.86315458801219 39.0 35.0 40.0 31.0 41.0 35 36.76278194441375 39.0 35.0 40.0 30.0 41.0 36 36.67639856629722 39.0 35.0 40.0 30.0 41.0 37 36.533970225017555 39.0 35.0 40.0 30.0 41.0 38 36.47683105958935 39.0 35.0 40.0 30.0 41.0 39 36.376919537226414 38.0 35.0 40.0 30.0 41.0 40 36.2985231631764 38.0 35.0 40.0 30.0 41.0 41 36.23017971239484 38.0 35.0 40.0 30.0 41.0 42 36.15489062300361 38.0 35.0 40.0 30.0 41.0 43 34.81976692242884 38.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 9.0 12 4.0 13 2.0 14 2.0 15 6.0 16 3.0 17 13.0 18 46.0 19 102.0 20 234.0 21 479.0 22 1013.0 23 1866.0 24 3202.0 25 5573.0 26 8644.0 27 13248.0 28 19700.0 29 28539.0 30 39431.0 31 53266.0 32 70369.0 33 93745.0 34 124551.0 35 170628.0 36 237893.0 37 341504.0 38 514855.0 39 352951.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.711594605265816 18.611381432761316 12.807882483253133 25.869141478719737 2 18.595194156056877 20.819863950022143 35.43020209598815 25.154739797932834 3 20.23399981363017 22.362026281989085 29.975810348521193 27.428163555859552 4 15.15777551273319 15.67773773921865 33.715407501481835 35.44907924656633 5 15.657371551317508 35.248059207966634 33.73529335476266 15.359275885953192 6 35.36266704837258 33.766082803924526 15.075302058425983 15.795948089276916 7 29.060340595672567 30.07125283757677 21.27954418165871 19.58886238509195 8 26.35730555334068 34.548019532327004 19.62315827698208 19.471516637350245 9 26.298224395042563 14.887923523043092 19.904634364483673 38.90921771743067 10 17.546863847230533 26.415762276632393 32.89120132649209 23.146172549644987 11 35.320253501399215 21.78634523954768 21.45875702849633 21.434644230556778 12 21.421483061960284 24.97989799614003 30.120775336930723 23.477843604968964 13 30.84627274744678 19.74175289473659 24.394802395140548 25.017171962676077 14 22.19097912369673 20.934615890814175 25.84229077344441 31.032114212044682 15 25.20767267309098 27.41408975148447 22.84245696922304 24.535780606201506 16 24.271596565031064 25.96703367433889 25.04238953024235 24.718980230387697 17 23.841552979467618 26.279971679470787 25.790414634450944 24.088060706610655 18 23.901354639696198 25.15651703602798 26.6540082483061 24.288120075969726 19 24.822684474912606 25.07404358172077 27.048699205814742 23.054572737551887 20 24.325922410588113 25.076301154436226 26.878516649838947 23.719259785136718 21 23.932768523864464 25.39010376188468 27.037411342237455 23.6397163720134 22 24.316363751643948 25.126448088796575 26.537286935570798 24.01990122398868 23 23.914852042526906 25.231449236796323 26.539784675596405 24.313914045080367 24 23.882429455655988 25.320022940781467 26.65021360480565 24.147333998756896 25 24.221689797980865 25.081440734873546 26.46086569747949 24.2360037696661 26 23.887136734935023 25.492126835238498 26.6656323461176 23.955104083708875 27 24.164914245860235 25.648043452991093 26.411679432359758 23.775362868788914 28 23.928829779977924 25.617109903443136 26.47527573608879 23.978784580490153 29 23.800628469817216 25.829561906006198 26.7550706524193 23.614738971757284 30 23.95534425101903 25.70659624320687 26.523213131195718 23.814846374578387 31 23.922489362989833 25.158486407971246 26.81472821226179 24.104296016777127 32 23.45992712363141 25.690553066888516 26.671396361561317 24.178123447918757 33 23.643222814741662 25.28760035391055 26.63830130622197 24.430875525125824 34 23.91302677096973 25.20603953538193 26.922179066825112 23.958754626823232 35 23.684387491702218 25.373484184021954 26.895376395011823 24.046751929264 36 23.52616526777214 24.94199959459758 27.177813151754037 24.35402198587624 37 23.375820531615144 24.61959899744558 27.50861960476146 24.495960866177814 38 23.161303090184745 24.602547118424578 27.888900523660805 24.34724926772987 39 22.79735354837594 24.534483702726668 28.313276160704593 24.354886588192798 40 22.989487396499896 24.503886387412926 28.390081666492144 24.11654454959503 41 22.60992697953102 24.461857108135813 28.526977033280467 24.401238879052702 42 22.250924884311406 24.84060095625016 28.36361522891307 24.54485893052536 43 22.115374454459953 24.560469805685432 28.35285573341813 24.971300006436483 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1463.0 1 1178.0 2 893.0 3 1685.5 4 2478.0 5 2478.0 6 3022.0 7 3566.0 8 3310.5 9 3055.0 10 4397.0 11 5739.0 12 5739.0 13 9311.0 14 12883.0 15 16505.0 16 20127.0 17 18315.0 18 16503.0 19 16503.0 20 18785.0 21 21067.0 22 17905.0 23 14743.0 24 17086.5 25 19430.0 26 19430.0 27 23313.0 28 27196.0 29 30988.5 30 34781.0 31 40219.5 32 45658.0 33 45658.0 34 52417.5 35 59177.0 36 67360.0 37 75543.0 38 85347.5 39 95152.0 40 95152.0 41 105276.5 42 115401.0 43 125603.5 44 135806.0 45 146321.0 46 156836.0 47 156836.0 48 165972.5 49 175109.0 50 179342.5 51 183576.0 52 180899.0 53 178222.0 54 178222.0 55 170052.0 56 161882.0 57 151543.5 58 141205.0 59 129045.5 60 116886.0 61 116886.0 62 102264.0 63 87642.0 64 74411.0 65 61180.0 66 51002.0 67 40824.0 68 40824.0 69 33449.0 70 26074.0 71 21245.5 72 16417.0 73 13440.5 74 10464.0 75 10464.0 76 8481.0 77 6498.0 78 5205.5 79 3913.0 80 3065.5 81 2218.0 82 2218.0 83 1768.5 84 1319.0 85 969.5 86 620.0 87 434.5 88 249.0 89 249.0 90 158.5 91 68.0 92 40.5 93 13.0 94 9.0 95 5.0 96 5.0 97 3.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2081882.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.36494086009151 #Duplication Level Percentage of deduplicated Percentage of total 1 84.3424713924104 55.13040654558865 2 8.437357231983245 11.030147129681003 3 2.6903224456169035 5.275583026569768 4 1.318212867033309 3.446596243785756 5 0.7430115955654528 2.4283454501249024 6 0.5127326033141412 2.010884177560176 7 0.3528464994400096 1.6144653398010573 8 0.2837342906419137 1.483702010223096 9 0.20299871285551196 1.1942098974427713 >10 1.0684994949147668 12.072705616036924 >50 0.03722443791327598 1.633240880592067 >100 0.00970702341857042 0.9457550677919945 >500 2.2035122312953346E-4 0.08843592226342267 >1k 4.4070244625891395E-4 0.49950452509684456 >5k 2.2035122312945697E-4 1.1460181674415302 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 9315 0.44743169881866507 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 8424 0.4046338841490536 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6131 0.2944931557119952 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4145 0.19909870011845052 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.8033462030989266E-5 2 4.8033462030989266E-5 0.0 0.0 0.0 4.8033462030989266E-5 3 4.8033462030989266E-5 0.0 0.0 0.0 4.8033462030989266E-5 4 4.8033462030989266E-5 0.0 0.0 4.8033462030989266E-5 4.8033462030989266E-5 5 4.8033462030989266E-5 0.0 0.0 4.8033462030989266E-5 4.8033462030989266E-5 6 4.8033462030989266E-5 0.0 0.0 4.8033462030989266E-5 9.606692406197853E-5 7 9.606692406197853E-5 0.0 0.0 4.8033462030989266E-5 9.606692406197853E-5 8 9.606692406197853E-5 0.0 0.0 4.8033462030989266E-5 1.9213384812395706E-4 9 1.441003860929678E-4 0.0 0.0 4.8033462030989266E-5 1.9213384812395706E-4 10 1.441003860929678E-4 0.0 0.0 4.8033462030989266E-5 1.9213384812395706E-4 11 1.441003860929678E-4 0.0 0.0 9.606692406197853E-5 1.9213384812395706E-4 12 1.441003860929678E-4 0.0 0.0 9.606692406197853E-5 1.9213384812395706E-4 13 1.441003860929678E-4 0.0 0.0 9.606692406197853E-5 1.9213384812395706E-4 14 1.441003860929678E-4 0.0 0.0 1.441003860929678E-4 2.882007721859356E-4 15 1.441003860929678E-4 0.0 0.0 1.441003860929678E-4 2.882007721859356E-4 16 1.9213384812395706E-4 0.0 0.0 2.882007721859356E-4 2.882007721859356E-4 17 1.9213384812395706E-4 0.0 0.0 3.842676962479141E-4 2.882007721859356E-4 18 1.9213384812395706E-4 0.0 0.0 4.323011582789034E-4 2.882007721859356E-4 19 1.9213384812395706E-4 0.0 0.0 6.244350064028605E-4 2.882007721859356E-4 20 1.9213384812395706E-4 0.0 0.0 8.646023165578068E-4 2.882007721859356E-4 21 1.9213384812395706E-4 0.0 0.0 0.0012969034748367102 2.882007721859356E-4 22 1.9213384812395706E-4 0.0 0.0 0.0019213384812395706 2.882007721859356E-4 23 1.9213384812395706E-4 0.0 0.0 0.0022575727154564955 2.882007721859356E-4 24 1.9213384812395706E-4 0.0 0.0 0.0031702084940452915 3.3623423421692486E-4 25 1.9213384812395706E-4 4.8033462030989266E-5 0.0 0.004274978120758045 3.3623423421692486E-4 26 1.9213384812395706E-4 4.8033462030989266E-5 0.0 0.008213722007299164 3.842676962479141E-4 27 1.9213384812395706E-4 4.8033462030989266E-5 0.0 0.02627430373095113 3.842676962479141E-4 28 1.9213384812395706E-4 4.8033462030989266E-5 0.0 0.07776617502817162 3.842676962479141E-4 29 1.9213384812395706E-4 4.8033462030989266E-5 0.0 0.1597592947150703 4.323011582789034E-4 30 1.9213384812395706E-4 4.8033462030989266E-5 0.0 0.2619745019170155 4.323011582789034E-4 31 1.9213384812395706E-4 4.8033462030989266E-5 0.0 0.5401362805384743 4.323011582789034E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACCCG 135 2.2220775E-8 16.444445 5 GGTATCA 4515 0.0 15.857143 1 CTTATAC 1345 0.0 15.405206 37 TCTATAC 200 9.840733E-10 13.874999 3 CTCTTAT 3185 0.0 13.708006 37 GCGCTAT 125 4.8480717E-5 13.32 1 TGCGACG 85 0.00940808 13.058824 22 GTTATAT 170 3.7351128E-7 13.058824 1 ACCCGTT 215 2.903107E-9 12.906977 7 GATCTAT 130 7.003137E-5 12.807692 1 GGGTATA 275 3.6379788E-12 12.781818 1 GTACTAA 150 1.9452138E-5 12.333333 1 TACCCGT 170 5.3137737E-6 11.970589 6 CTACACT 450 0.0 11.922222 4 GTAATAC 235 1.0888471E-8 11.808511 3 TCTTATA 2020 0.0 11.722773 37 GTATTAC 175 7.340055E-6 11.628571 1 TCTCTTA 4795 0.0 11.574556 37 TATACAC 610 0.0 11.52459 37 GTATCAA 6215 0.0 11.519711 2 >>END_MODULE