##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727083.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4203714 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.954437671068963 33.0 31.0 34.0 30.0 34.0 2 32.184247072945496 33.0 31.0 34.0 30.0 34.0 3 32.289764717580695 34.0 31.0 34.0 30.0 34.0 4 35.912298505559605 37.0 35.0 37.0 35.0 37.0 5 35.62139764979254 37.0 35.0 37.0 33.0 37.0 6 35.64074435130458 37.0 35.0 37.0 33.0 37.0 7 35.60436199988867 37.0 35.0 37.0 33.0 37.0 8 35.57579844870512 37.0 35.0 37.0 33.0 37.0 9 37.39772758089632 39.0 37.0 39.0 34.0 39.0 10 37.224645634788665 39.0 37.0 39.0 34.0 39.0 11 37.305023129546875 39.0 37.0 39.0 34.0 39.0 12 37.2111558969045 39.0 37.0 39.0 34.0 39.0 13 37.2912755244529 39.0 37.0 39.0 34.0 39.0 14 38.46273985337727 40.0 38.0 41.0 34.0 41.0 15 38.413786713368225 40.0 38.0 41.0 34.0 41.0 16 38.36312770088546 40.0 38.0 41.0 34.0 41.0 17 38.333981331746166 40.0 38.0 41.0 34.0 41.0 18 38.33959446337215 40.0 38.0 41.0 34.0 41.0 19 38.38700943974781 40.0 38.0 41.0 34.0 41.0 20 38.31035008566234 40.0 38.0 41.0 34.0 41.0 21 38.2636437683439 40.0 38.0 41.0 34.0 41.0 22 38.19730005419017 40.0 38.0 41.0 34.0 41.0 23 38.13903324536351 40.0 38.0 41.0 33.0 41.0 24 38.0545205977381 40.0 37.0 41.0 33.0 41.0 25 38.02994851695429 40.0 37.0 41.0 33.0 41.0 26 37.87799693318813 40.0 37.0 41.0 33.0 41.0 27 37.741369417615 40.0 37.0 41.0 33.0 41.0 28 37.6563679165614 40.0 37.0 41.0 32.0 41.0 29 37.5570773844272 39.0 37.0 41.0 32.0 41.0 30 37.50213715776097 39.0 37.0 41.0 32.0 41.0 31 37.43917069524711 39.0 36.0 41.0 32.0 41.0 32 37.32100946924553 39.0 36.0 41.0 32.0 41.0 33 37.234880631746115 39.0 36.0 41.0 31.0 41.0 34 37.19205826086171 39.0 36.0 41.0 31.0 41.0 35 37.10405655570288 39.0 36.0 41.0 31.0 41.0 36 36.98436073434111 39.0 36.0 40.0 31.0 41.0 37 36.89292206843758 39.0 36.0 40.0 31.0 41.0 38 36.841931444432234 39.0 35.0 40.0 31.0 41.0 39 36.730534712875325 39.0 35.0 40.0 30.0 41.0 40 36.63974951673686 39.0 35.0 40.0 30.0 41.0 41 36.56893380472601 39.0 35.0 40.0 30.0 41.0 42 36.41864931819815 39.0 35.0 40.0 30.0 41.0 43 35.14806954041117 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 6.0 11 13.0 12 11.0 13 6.0 14 5.0 15 9.0 16 22.0 17 45.0 18 92.0 19 240.0 20 483.0 21 1066.0 22 2097.0 23 3766.0 24 6481.0 25 10549.0 26 16704.0 27 25129.0 28 35990.0 29 51187.0 30 69612.0 31 91843.0 32 120563.0 33 159907.0 34 212093.0 35 290133.0 36 412246.0 37 631785.0 38 1076141.0 39 985486.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.092394011581185 18.3689708671903 12.801346618728104 25.737288502500412 2 18.800898443614386 20.759785275592012 35.3108227629187 25.128493517874904 3 20.404409053517913 22.17986285460904 30.015457759495533 27.400270332377513 4 15.34117211589561 15.577368013142664 33.40369968080607 35.67776019015565 5 15.806950710728657 35.18543364272641 33.48764925492077 15.519966391624168 6 35.56968908921967 33.48536556007378 14.901180242043107 16.043765108663436 7 29.2314129838519 30.04892816209666 21.088756275997845 19.630902578053597 8 26.60775685500964 34.410880473790556 19.427748890623864 19.553613780575937 9 26.396063100391704 14.826983948004074 19.771730426951027 39.0052225246532 10 17.81988498741827 26.3778411185918 32.453635047484205 23.348638846505732 11 35.37752568324105 21.79208671189334 21.161715568661428 21.668672036204175 12 21.523276797612777 24.966636645594825 29.89237612263822 23.61771043415418 13 31.17892891857058 19.621529913785764 24.160420999145042 25.03912016849862 14 22.341624572937167 20.903015761776373 25.711144954200023 31.044214711086433 15 25.527497826921625 27.21712276334689 22.704993726975715 24.550385682755774 16 24.34554301267879 25.85259130378518 24.985453339594464 24.816412343941572 17 23.953508730612977 26.207444179123506 25.696800495942394 24.14224659432112 18 24.046045948891862 25.019970435667126 26.480060251482378 24.453923363958634 19 24.950817301081855 24.991162576711925 26.896001963977568 23.162018158228655 20 24.493412254021088 24.94924726087455 26.708334582228954 23.84900590287541 21 24.08279916283553 25.327650739322415 26.951952487728708 23.637597610113342 22 24.60890536320977 25.041118401489733 26.257304849949353 24.092671385351146 23 24.027871544067935 25.20899376123114 26.39242346172932 24.370711232971605 24 24.002156188551364 25.240917912112952 26.493310439292493 24.26361546004319 25 24.416694380255173 24.947034931491533 26.306095038815673 24.330175649437617 26 23.932860323038152 25.413217930620398 26.574286452408515 24.079635293932935 27 24.27981542036399 25.558399072819892 26.33311876117167 23.828666745644448 28 24.05396751539234 25.604881778351242 26.228592144946113 24.11255856131031 29 23.94368408507334 25.797330646185728 26.623576199522613 23.635409069218316 30 24.151428950685037 25.60195579432854 26.406244573251175 23.840370681735244 31 24.07157099650452 25.11512438762485 26.67003511656597 24.14326949930466 32 23.58126647055437 25.663115996949365 26.521666316975896 24.23395121552037 33 23.691787785753267 25.236754926714806 26.52763722746124 24.54382006007069 34 24.133516219228994 25.164390346250958 26.70502798239842 23.997065452121625 35 23.757087185284252 25.295583857512664 26.727341584132507 24.219987373070577 36 23.617543914738253 24.925768023228983 27.047035074222464 24.409652987810304 37 23.394098647053536 24.607763515786278 27.405242126367302 24.592895710792885 38 23.285527987869774 24.566205027268744 27.751364626613512 24.396902358247967 39 22.924371163214243 24.4701946897434 28.22047360976508 24.384960537277276 40 23.22598540243223 24.372875985378645 28.213907987079995 24.18723062510913 41 22.690554114766133 24.471431691118852 28.350572850579276 24.48744134353574 42 22.331205215197798 24.769406291674457 28.22323307437185 24.67615541875589 43 22.253345494008396 24.473786751429806 28.16992307278754 25.102944681774257 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1968.0 1 1711.0 2 1454.0 3 2877.5 4 4301.0 5 4301.0 6 5568.0 7 6835.0 8 6609.5 9 6384.0 10 9351.5 11 12319.0 12 12319.0 13 20094.5 14 27870.0 15 35421.5 16 42973.0 17 38743.0 18 34513.0 19 34513.0 20 38931.0 21 43349.0 22 35639.5 23 27930.0 24 32463.0 25 36996.0 26 36996.0 27 44358.5 28 51721.0 29 58852.5 30 65984.0 31 75958.0 32 85932.0 33 85932.0 34 99020.0 35 112108.0 36 129139.5 37 146171.0 38 165571.0 39 184971.0 40 184971.0 41 205917.0 42 226863.0 43 249775.5 44 272688.0 45 294337.0 46 315986.0 47 315986.0 48 336681.0 49 357376.0 50 365662.5 51 373949.0 52 369896.5 53 365844.0 54 365844.0 55 349011.0 56 332178.0 57 310631.5 58 289085.0 59 263902.5 60 238720.0 61 238720.0 62 209757.5 63 180795.0 64 153862.0 65 126929.0 66 105703.5 67 84478.0 68 84478.0 69 69555.0 70 54632.0 71 44886.5 72 35141.0 73 28959.0 74 22777.0 75 22777.0 76 18574.5 77 14372.0 78 11520.0 79 8668.0 80 6745.5 81 4823.0 82 4823.0 83 3687.0 84 2551.0 85 1909.5 86 1268.0 87 915.0 88 562.0 89 562.0 90 370.5 91 179.0 92 113.5 93 48.0 94 33.5 95 19.0 96 19.0 97 11.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4203714.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.50467071552633 #Duplication Level Percentage of deduplicated Percentage of total 1 80.32498609047431 44.58411903181009 2 10.07247246511579 11.181385349349153 3 3.3442971423674877 5.568723349859492 4 1.7086692594110653 3.7935649842141372 5 1.018774077921752 2.8273359864280403 6 0.681058905379703 2.2681170168586333 7 0.47444804775564203 1.8433857863610854 8 0.34953468314467245 1.55206459932807 9 0.2764476693901143 1.3809723173615682 >10 1.621212892288359 16.514617185069934 >50 0.09606191315690772 3.611691196748286 >100 0.030879425988316812 2.800675564801585 >500 6.430154065712082E-4 0.2400295441277015 >1k 3.429414661095039E-4 0.37498660707679643 >5k 4.286768326368121E-5 0.21671180312532856 >10k+ 1.2860304979104363E-4 1.2416196774801298 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 20266 0.48209749759379444 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18563 0.44158570254779467 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13354 0.3176714686108522 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9108 0.21666554860773116 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.3788487989430298E-5 4.7576975978860595E-5 2 0.0 0.0 0.0 2.3788487989430298E-5 7.13654639682909E-5 3 0.0 0.0 0.0 2.3788487989430298E-5 7.13654639682909E-5 4 0.0 0.0 0.0 2.3788487989430298E-5 7.13654639682909E-5 5 0.0 0.0 0.0 2.3788487989430298E-5 7.13654639682909E-5 6 2.3788487989430298E-5 0.0 0.0 2.3788487989430298E-5 7.13654639682909E-5 7 2.3788487989430298E-5 0.0 0.0 2.3788487989430298E-5 7.13654639682909E-5 8 4.7576975978860595E-5 0.0 0.0 2.3788487989430298E-5 7.13654639682909E-5 9 1.1894243994715149E-4 0.0 0.0 4.7576975978860595E-5 1.9030790391544238E-4 10 1.427309279365818E-4 0.0 0.0 4.7576975978860595E-5 1.9030790391544238E-4 11 1.427309279365818E-4 0.0 0.0 4.7576975978860595E-5 1.9030790391544238E-4 12 1.665194159260121E-4 0.0 0.0 4.7576975978860595E-5 1.9030790391544238E-4 13 1.665194159260121E-4 0.0 0.0 7.13654639682909E-5 2.140963919048727E-4 14 2.140963919048727E-4 0.0 0.0 9.515395195772119E-5 3.092503438625939E-4 15 2.140963919048727E-4 0.0 0.0 1.427309279365818E-4 3.8061580783088476E-4 16 2.140963919048727E-4 0.0 0.0 1.427309279365818E-4 4.519812717991757E-4 17 2.140963919048727E-4 0.0 0.0 2.6167336788373327E-4 4.519812717991757E-4 18 2.3788487989430298E-4 0.0 0.0 3.330388318520242E-4 4.995582477780363E-4 19 2.6167336788373327E-4 0.0 0.0 4.519812717991757E-4 4.995582477780363E-4 20 2.854618558731636E-4 0.0 0.0 5.471352237568968E-4 4.995582477780363E-4 21 2.854618558731636E-4 0.0 0.0 9.515395195772119E-4 5.709237117463272E-4 22 2.854618558731636E-4 0.0 0.0 0.0016176171832812604 5.709237117463272E-4 23 2.854618558731636E-4 0.0 0.0 0.002140963919048727 7.850201036511999E-4 24 2.854618558731636E-4 0.0 0.0 0.0033065998305308116 8.088085916406302E-4 25 2.854618558731636E-4 0.0 0.0 0.004448447254023466 8.088085916406302E-4 26 2.854618558731636E-4 0.0 0.0 0.007850201036512 8.088085916406302E-4 27 2.854618558731636E-4 0.0 0.0 0.02709508781996111 8.088085916406302E-4 28 2.854618558731636E-4 0.0 0.0 0.07992931964448581 8.088085916406302E-4 29 2.854618558731636E-4 0.0 0.0 0.1659722807022552 8.088085916406302E-4 30 2.854618558731636E-4 0.0 0.0 0.27211651411109317 8.088085916406302E-4 31 2.854618558731636E-4 0.0 0.0 0.5506559199793326 8.325970796300605E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2965 0.0 14.8499155 37 GGTATCA 11360 0.0 14.754401 1 TATACAC 1385 0.0 13.891697 37 ATACCCG 335 0.0 13.80597 5 TCTTATA 4655 0.0 13.790547 37 CGCGTGA 230 7.927156E-9 12.065218 10 TAACCGT 155 2.7237174E-5 11.935484 6 CTCTTAT 6840 0.0 11.819445 37 TAAGACT 505 0.0 11.722773 4 GTATCAA 14450 0.0 11.535295 2 TACCCGT 385 0.0 11.532469 6 TATATCG 145 1.9405462E-4 11.482759 5 TCTCTTA 10005 0.0 11.371814 37 TAATCCG 115 0.005222383 11.26087 5 ACCCGTT 480 0.0 11.177084 7 TCTACAC 705 0.0 11.021276 3 ATTACGG 460 0.0 10.858696 25 TATACCG 205 3.5787143E-6 10.829268 5 CCGTTTA 120 0.0071677077 10.791667 9 AACGCAG 15215 0.0 10.724286 7 >>END_MODULE