##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727080.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1259188 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.175529785862 31.0 30.0 31.0 27.0 34.0 2 30.430799848791445 31.0 30.0 31.0 27.0 34.0 3 30.507214967105785 31.0 30.0 33.0 27.0 34.0 4 34.338229875125876 35.0 35.0 37.0 30.0 37.0 5 33.112504248769845 35.0 32.0 37.0 26.0 37.0 6 33.179047131961234 35.0 32.0 37.0 27.0 37.0 7 33.20302131214719 35.0 32.0 37.0 27.0 37.0 8 33.085257324561546 35.0 32.0 37.0 26.0 37.0 9 34.692579662449134 37.0 33.0 39.0 28.0 39.0 10 34.20838508626194 37.0 32.0 39.0 27.0 39.0 11 34.49027230246794 37.0 33.0 39.0 27.0 39.0 12 34.24698694714372 37.0 32.0 39.0 27.0 39.0 13 34.52314189779445 37.0 33.0 39.0 27.0 39.0 14 35.16975463552702 37.0 33.0 39.0 27.0 40.0 15 35.1780846069054 37.0 33.0 39.0 27.0 40.0 16 35.089647455344235 37.0 33.0 39.0 27.0 40.0 17 34.952724295339536 37.0 33.0 39.0 27.0 40.0 18 34.92662334774474 37.0 33.0 39.0 27.0 40.0 19 34.96708513740601 37.0 33.0 39.0 27.0 40.0 20 34.78219773377764 37.0 33.0 39.0 27.0 40.0 21 34.743533928214056 37.0 33.0 39.0 27.0 40.0 22 34.60503991461164 37.0 32.0 39.0 26.0 40.0 23 34.48752529407841 37.0 32.0 39.0 26.0 40.0 24 34.30547781586228 37.0 32.0 39.0 25.0 40.0 25 34.24840214487432 37.0 32.0 39.0 25.0 40.0 26 33.968896622267685 37.0 32.0 39.0 24.0 40.0 27 33.67005482898503 36.0 31.0 39.0 24.0 40.0 28 33.482564954558015 36.0 31.0 39.0 24.0 40.0 29 33.34170830725833 36.0 31.0 39.0 23.0 40.0 30 33.22087091045976 36.0 31.0 39.0 23.0 40.0 31 33.13648716474427 36.0 30.0 39.0 23.0 40.0 32 32.994996775699896 36.0 30.0 38.0 22.0 40.0 33 32.941009603014 36.0 30.0 38.0 21.0 40.0 34 32.91779861307446 36.0 30.0 38.0 21.0 40.0 35 32.79803412993135 36.0 30.0 38.0 21.0 40.0 36 32.65830757599342 35.0 30.0 38.0 20.0 40.0 37 32.442496275377465 35.0 30.0 38.0 19.0 40.0 38 32.320127733110546 35.0 30.0 38.0 19.0 40.0 39 32.15050175192267 35.0 30.0 38.0 18.0 40.0 40 32.064054771805324 35.0 30.0 38.0 18.0 40.0 41 31.986898699797013 35.0 30.0 38.0 18.0 40.0 42 31.900938541345692 35.0 29.0 38.0 18.0 40.0 43 30.553713186593264 33.0 27.0 38.0 15.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 5.0 12 4.0 13 13.0 14 24.0 15 47.0 16 107.0 17 252.0 18 520.0 19 1137.0 20 2043.0 21 3595.0 22 6134.0 23 9358.0 24 14200.0 25 20332.0 26 28057.0 27 36910.0 28 47839.0 29 59557.0 30 73354.0 31 88121.0 32 103369.0 33 120034.0 34 136344.0 35 147631.0 36 146967.0 37 120853.0 38 73162.0 39 19219.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 40.27929109870806 20.7855379816199 13.650940129670866 25.28423079000118 2 19.95889414448041 22.274195751547822 33.63905945736459 24.12785064660718 3 21.272121398869746 23.47822565018091 29.53347712970581 25.71617582124353 4 17.075130957410646 16.853956676842536 33.030889747996326 33.04002261775049 5 15.642858731182319 36.0454515131974 33.21179998538741 15.09988977023288 6 35.181402618195214 34.73301842139537 14.801999383729832 15.283579576679573 7 28.909185919814988 30.550799404060395 21.072707173194154 19.46730750293046 8 26.15447415318443 35.407500706804704 19.331902781792714 19.10612235821815 9 26.521139019749235 14.93780118616124 19.432682014123387 39.10837777996613 10 17.09403202698882 27.087456360765827 33.14858464343688 22.669926968808472 11 35.953249236809754 21.88307067729362 21.150455690492603 21.013224395404023 12 21.19056090115217 24.983957915736173 30.07517543051554 23.75030575259612 13 30.79746630368142 20.06404127104134 24.203454924919868 24.935037500357375 14 22.20677134788451 20.924198769365653 25.394301724603473 31.47472815814636 15 25.218156462736303 27.8870986699365 22.307629996473917 24.58711487085328 16 24.33584182822581 26.473806929545074 24.68964126087606 24.500709981353065 17 24.04144575710696 26.45355578356846 25.38373936219214 24.121259097132437 18 23.983789553267663 25.74635399956162 26.160350956330586 24.109505490840128 19 24.911609704031488 25.480388949068768 26.434734130249016 23.173267216650732 20 24.431379587480187 25.310835236676333 26.30846227886543 23.949322896978053 21 24.165335120728596 25.55138708437501 26.70609948633564 23.577178308560757 22 24.729111141465772 25.17304802777663 25.956568836424744 24.141271994332854 23 24.24578379082393 25.412011550300672 26.13049044304742 24.21171421582798 24 24.15580516968078 25.40176685292427 26.093800131513323 24.34862784588163 25 24.64421516088146 25.119124388097724 25.940526752160913 24.2961336988599 26 24.223229573344092 25.458231812882588 26.09626203553401 24.22227657823931 27 24.558604433968558 25.857219096751237 25.60745496303967 23.97672150624053 28 24.270005749737134 25.893274078215484 25.665587664431367 24.17113250761602 29 24.281124025959585 25.91400172174449 26.07084883273983 23.734025419556097 30 24.733320203178558 25.59141287877584 25.711966759530746 23.96330015851485 31 24.539306283096725 25.311867648039847 26.159795042519463 23.989031026343962 32 24.11951193944034 25.69568642649072 25.954662846215182 24.23013878785376 33 24.196148629116543 25.100779232330677 26.019863594634003 24.68320854391878 34 24.388574224023735 25.211564913261565 26.47158327430058 23.928277588414122 35 24.260872879982973 25.26517088790554 26.16416293674971 24.30979329536177 36 24.204963833835773 25.012944850173284 26.441881593534884 24.34020972245606 37 23.995463743301237 24.748409292337602 26.9595961842076 24.296530780153557 38 24.036363116548124 24.65708059479601 26.924653030365604 24.381903258290265 39 23.485929027277898 24.866024771519424 27.48557006578843 24.162476135414252 40 24.09338399031757 24.51500490792479 27.31744584605317 24.074165255704468 41 23.480608137942866 24.677728822066282 27.427278531879274 24.414384508111578 42 23.275714190414774 24.897950107529613 27.293620968433626 24.532714733621987 43 23.246330174684 24.628887822946215 27.078164658494202 25.046617343875578 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 660.0 1 549.0 2 438.0 3 718.0 4 998.0 5 998.0 6 1244.5 7 1491.0 8 1443.5 9 1396.0 10 1905.0 11 2414.0 12 2414.0 13 3984.5 14 5555.0 15 7001.0 16 8447.0 17 7832.5 18 7218.0 19 7218.0 20 8668.5 21 10119.0 22 9402.5 23 8686.0 24 10105.0 25 11524.0 26 11524.0 27 13936.5 28 16349.0 29 18753.5 30 21158.0 31 24538.5 32 27919.0 33 27919.0 34 32578.5 35 37238.0 36 42508.0 37 47778.0 38 53387.0 39 58996.0 40 58996.0 41 65137.0 42 71278.0 43 77978.0 44 84678.0 45 91058.0 46 97438.0 47 97438.0 48 103521.5 49 109605.0 50 111659.0 51 113713.0 52 111733.5 53 109754.0 54 109754.0 55 104488.5 56 99223.0 57 92191.0 58 85159.0 59 77481.5 60 69804.0 61 69804.0 62 60632.5 63 51461.0 64 43828.5 65 36196.0 66 29952.5 67 23709.0 68 23709.0 69 19600.0 70 15491.0 71 12486.5 72 9482.0 73 7698.5 74 5915.0 75 5915.0 76 4738.0 77 3561.0 78 2835.0 79 2109.0 80 1623.0 81 1137.0 82 1137.0 83 859.5 84 582.0 85 457.5 86 333.0 87 230.5 88 128.0 89 128.0 90 80.5 91 33.0 92 23.5 93 14.0 94 7.5 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1259188.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 75.803958983205 #Duplication Level Percentage of deduplicated Percentage of total 1 87.7397144240236 66.51017713396806 2 7.070646718069697 10.719660276025769 3 2.1702808598176517 4.935476438389565 4 1.0118166937621547 3.067988446098739 5 0.599998553536993 2.2741132871150276 6 0.35634078554800375 1.620722537503436 7 0.24254162515530048 1.2869930783494596 8 0.18020790239472428 1.0928377953263275 9 0.12085931628839704 0.8245453189197467 >10 0.49568628735714326 5.925647342903794 >50 0.008650496860447563 0.42889252359580454 >100 0.002731132222862744 0.4079254468894708 >500 1.0504099259790865E-4 0.048571390876126753 >1k 4.201639703916346E-4 0.8564489840387203 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3653 0.29010759314732987 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3282 0.2606441611578255 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2186 0.17360394158775339 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1635 0.12984558302652185 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 7.941625873181764E-5 8 0.0 0.0 0.0 0.0 1.5883251746363528E-4 9 0.0 0.0 0.0 0.0 3.9708129365908823E-4 10 0.0 0.0 0.0 0.0 3.9708129365908823E-4 11 0.0 0.0 0.0 0.0 3.9708129365908823E-4 12 0.0 0.0 0.0 0.0 3.9708129365908823E-4 13 0.0 0.0 0.0 0.0 3.9708129365908823E-4 14 0.0 0.0 0.0 0.0 3.9708129365908823E-4 15 0.0 7.941625873181764E-5 0.0 0.0 3.9708129365908823E-4 16 0.0 7.941625873181764E-5 0.0 1.5883251746363528E-4 3.9708129365908823E-4 17 0.0 7.941625873181764E-5 0.0 1.5883251746363528E-4 3.9708129365908823E-4 18 0.0 7.941625873181764E-5 0.0 1.5883251746363528E-4 3.9708129365908823E-4 19 0.0 7.941625873181764E-5 0.0 1.5883251746363528E-4 3.9708129365908823E-4 20 0.0 7.941625873181764E-5 0.0 2.3824877619545295E-4 3.9708129365908823E-4 21 0.0 7.941625873181764E-5 0.0 3.1766503492727056E-4 3.9708129365908823E-4 22 0.0 7.941625873181764E-5 0.0 7.147463285863588E-4 3.9708129365908823E-4 23 0.0 7.941625873181764E-5 0.0 7.941625873181765E-4 7.941625873181765E-4 24 0.0 7.941625873181764E-5 0.0 0.0013500763984409 7.941625873181765E-4 25 0.0 7.941625873181764E-5 0.0 0.0016677414333681707 7.941625873181765E-4 26 0.0 7.941625873181764E-5 0.0 0.002858985314345435 7.941625873181765E-4 27 0.0 7.941625873181764E-5 0.0 0.012309520103431735 7.941625873181765E-4 28 0.0 7.941625873181764E-5 0.0 0.03796097167380884 7.941625873181765E-4 29 0.0 7.941625873181764E-5 0.0 0.08259290908109035 7.941625873181765E-4 30 0.0 7.941625873181764E-5 0.0 0.13659596501872637 7.941625873181765E-4 31 0.0 7.941625873181764E-5 0.0 0.31623554227009787 7.941625873181765E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1380 0.0 20.242754 1 CTTATAC 615 0.0 16.84553 37 GTATAGG 145 2.9795046E-9 16.586206 1 GTATCAA 1805 0.0 15.476454 2 TCGTTAC 145 5.34601E-8 15.310345 23 CTCGTTA 190 4.5474735E-10 14.605264 22 TTAGACT 115 2.2100654E-5 14.478261 4 ACGGGAT 80 0.0062990636 13.875 17 ATAAGGT 160 1.7834464E-7 13.875 3 TCTTATA 1010 0.0 13.737624 37 ACTAGAC 135 6.567687E-6 13.703703 3 ATAAGGG 95 0.0012451893 13.631579 3 TATACTG 205 1.4224497E-9 13.536586 5 GTATACT 110 2.456652E-4 13.454545 4 ATAGACC 125 4.845099E-5 13.32 3 AGTACCG 155 1.8877236E-6 13.129032 5 TTAGACC 85 0.009405379 13.058824 4 TATAGGG 85 0.009405379 13.058824 2 TAGTCGC 85 0.009405379 13.058824 33 GGGTAAG 565 0.0 12.115045 1 >>END_MODULE