##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727078.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1550685 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.060501649271128 31.0 31.0 34.0 28.0 34.0 2 31.31669359025205 31.0 31.0 34.0 28.0 34.0 3 31.407023347746318 31.0 31.0 34.0 28.0 34.0 4 35.22978361175868 37.0 35.0 37.0 33.0 37.0 5 34.644834379645125 35.0 35.0 37.0 30.0 37.0 6 34.662581375327676 35.0 35.0 37.0 31.0 37.0 7 34.623606341713504 35.0 35.0 37.0 31.0 37.0 8 34.55995060247568 35.0 35.0 37.0 30.0 37.0 9 36.31952717669933 38.0 35.0 39.0 32.0 39.0 10 36.00546661636631 37.0 35.0 39.0 31.0 39.0 11 36.14737809419708 37.0 35.0 39.0 32.0 39.0 12 35.99331392255681 37.0 35.0 39.0 31.0 39.0 13 36.16778649435572 37.0 35.0 39.0 32.0 39.0 14 37.072719475586595 38.0 36.0 40.0 32.0 41.0 15 37.06951508526877 38.0 36.0 40.0 32.0 41.0 16 37.003637747189146 38.0 36.0 40.0 31.0 41.0 17 36.8954526547945 38.0 36.0 40.0 31.0 41.0 18 36.90570941229198 38.0 36.0 40.0 31.0 41.0 19 36.92599980008835 39.0 36.0 40.0 31.0 41.0 20 36.79195645795245 39.0 36.0 40.0 31.0 41.0 21 36.78475125509049 38.0 36.0 40.0 31.0 41.0 22 36.657132170621374 38.0 36.0 40.0 30.0 41.0 23 36.58349116680693 38.0 35.0 40.0 30.0 41.0 24 36.45198799240336 38.0 35.0 40.0 30.0 41.0 25 36.41479023786262 38.0 35.0 40.0 30.0 41.0 26 36.227362746141225 38.0 35.0 40.0 30.0 41.0 27 35.995802500185405 38.0 34.0 40.0 29.0 41.0 28 35.860620951386004 38.0 34.0 40.0 28.0 41.0 29 35.754686477266496 38.0 34.0 40.0 27.0 41.0 30 35.68273956348323 38.0 34.0 40.0 27.0 41.0 31 35.65031131403219 38.0 34.0 40.0 27.0 41.0 32 35.5292370790973 38.0 34.0 40.0 27.0 41.0 33 35.49702550808191 38.0 34.0 40.0 27.0 41.0 34 35.49108748714278 38.0 34.0 40.0 27.0 41.0 35 35.36688366754047 38.0 34.0 40.0 27.0 41.0 36 35.28192701934951 38.0 34.0 40.0 27.0 41.0 37 35.11235873178627 38.0 33.0 40.0 26.0 41.0 38 35.049072506666406 38.0 33.0 40.0 26.0 41.0 39 34.9361501529969 38.0 33.0 40.0 26.0 41.0 40 34.856732347317475 38.0 33.0 40.0 25.0 41.0 41 34.7966956538562 38.0 33.0 40.0 25.0 41.0 42 34.73722774128853 38.0 33.0 40.0 25.0 41.0 43 33.37644589326652 36.0 31.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 2.0 11 0.0 12 1.0 13 0.0 14 4.0 15 3.0 16 18.0 17 45.0 18 115.0 19 237.0 20 498.0 21 1049.0 22 1984.0 23 3507.0 24 5755.0 25 9092.0 26 13772.0 27 19858.0 28 27975.0 29 37328.0 30 49524.0 31 63001.0 32 78976.0 33 98990.0 34 124681.0 35 158378.0 36 206762.0 37 267006.0 38 293358.0 39 88763.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.56221282852417 19.485130764791045 13.141224684574881 25.811431722109905 2 19.004375485672462 21.202565317907894 34.83221930953095 24.960839886888696 3 20.42033037012675 22.58892038034804 29.885631188797205 27.105118060728 4 15.758777572492159 16.122745754295682 33.54691636276871 34.57156031044345 5 15.670171569338711 35.48148076495226 33.608631024353755 15.239716641355272 6 35.503728997185114 34.15245520528025 14.962290858556058 15.38152493897858 7 29.293312310366066 30.040465987611924 21.07062362762263 19.59559807439938 8 26.2206057323054 34.869686622363666 19.371697024218328 19.538010621112605 9 26.163276229537267 14.908056762011626 19.78918993864002 39.139477069811086 10 17.40675894846471 26.594762959595275 33.07267433424583 22.92580375769418 11 35.73117686699749 21.640823249080245 21.363913367318315 21.264086516603953 12 21.39267485014687 24.787497138361434 30.162154144781177 23.657673866710518 13 30.768015425441014 19.873475270606217 24.22490705720375 25.133602246749014 14 22.22275961913606 20.790940777785302 25.43172855866923 31.554571044409407 15 25.149595178904804 27.545955497086773 22.491737522449757 24.812711801558667 16 24.560887607734646 26.18668523910401 24.515810754602 24.736616398559345 17 24.021706536143704 26.348936115329675 25.559156114878263 24.070201233648355 18 24.132947697307962 25.372206476492646 26.205451139335196 24.289394686864192 19 24.88493794677836 25.29359605593657 26.54227002905168 23.27919596823339 20 24.54418531165259 25.220209133382987 26.382147244604802 23.853458310359617 21 24.233999812985875 25.392197641687382 26.478685226206483 23.89511731912026 22 24.685413220608957 25.093555428729886 26.05783895504245 24.16319239561871 23 24.229679141798623 25.239619909910783 26.000058038866698 24.5306429094239 24 24.30087348494375 25.29243527860268 26.00695821524036 24.399733021213205 25 24.62769679206286 25.116126099111035 25.873081896065287 24.38309521276081 26 24.25708638440431 25.377365486865482 26.14180184886034 24.223746279869864 27 24.48795209858869 25.566443217029892 25.82058896552169 24.12501571885973 28 24.339759525628995 25.514272724634594 25.926929066831754 24.21903868290465 29 24.257860235960237 25.743526248077465 26.06609337163899 23.932520144323316 30 24.268113769076248 25.66704391930018 26.002637544053115 24.06220476757046 31 24.424754221521457 25.068985641829254 26.21054566207837 24.295714474570914 32 23.939871734104607 25.512596046263425 26.117296549589376 24.430235670042595 33 24.091998052473585 25.19680012381625 26.084730296610854 24.626471527099312 34 24.321702989324073 25.114126982591568 26.3376507801391 24.226519247945262 35 24.159194162579762 25.2335580727227 26.299216152861476 24.30803161183606 36 24.040601411634213 24.916859323460276 26.51518522459429 24.527354040311216 37 23.95115706929518 24.54966676017373 26.840783266749856 24.65839290378123 38 23.582674753415425 24.62756781680354 27.29271257541022 24.497044854370813 39 23.39559613977049 24.502719765780927 27.571557086061965 24.530127008386614 40 23.52605461457356 24.453967117757635 27.732453722064765 24.28752454560404 41 23.21451487568397 24.427462701967194 27.736838880881677 24.621183541467158 42 22.907166832722314 24.716496258105288 27.6202452464556 24.756091662716802 43 22.98094068105386 24.41488761418341 27.57213747472891 25.032034230033823 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 750.0 1 600.5 2 451.0 3 827.0 4 1203.0 5 1203.0 6 1504.0 7 1805.0 8 1780.0 9 1755.0 10 2332.0 11 2909.0 12 2909.0 13 4757.0 14 6605.0 15 8637.0 16 10669.0 17 9922.0 18 9175.0 19 9175.0 20 10873.0 21 12571.0 22 11460.0 23 10349.0 24 12198.5 25 14048.0 26 14048.0 27 16959.0 28 19870.0 29 22626.0 30 25382.0 31 29738.5 32 34095.0 33 34095.0 34 39379.0 35 44663.0 36 51250.0 37 57837.0 38 65040.5 39 72244.0 40 72244.0 41 80301.0 42 88358.0 43 96207.0 44 104056.0 45 111622.5 46 119189.0 47 119189.0 48 125849.0 49 132509.0 50 134748.0 51 136987.0 52 135424.0 53 133861.0 54 133861.0 55 128281.5 56 122702.0 57 114618.5 58 106535.0 59 97249.0 60 87963.0 61 87963.0 62 76954.0 63 65945.0 64 56125.0 65 46305.0 66 38334.0 67 30363.0 68 30363.0 69 24899.5 70 19436.0 71 15743.5 72 12051.0 73 9796.5 74 7542.0 75 7542.0 76 6118.0 77 4694.0 78 3788.5 79 2883.0 80 2188.0 81 1493.0 82 1493.0 83 1156.0 84 819.0 85 600.5 86 382.0 87 279.5 88 177.0 89 177.0 90 108.0 91 39.0 92 25.5 93 12.0 94 7.5 95 3.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1550685.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 70.6237217310932 #Duplication Level Percentage of deduplicated Percentage of total 1 85.38894808591778 60.304853085306185 2 8.092380829400193 11.430281036751847 3 2.5848590079983564 5.476570898849565 4 1.2517153209637775 3.5360317805716726 5 0.7120438575138524 2.514359362669624 6 0.4533993802881294 1.9212450999911372 7 0.32801903566930246 1.6216147568327244 8 0.23482882725034365 1.326758860013378 9 0.16874247379913615 1.0725499362425828 >10 0.7661239206944109 8.738575188492623 >50 0.016012697289606664 0.7295647955402461 >100 0.0021035872855078184 0.22754661316049782 >500 4.572088498229955E-4 0.1881203199359312 >1k 3.6576707985839645E-4 0.9119282656420477 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 4818 0.3107013997040018 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4396 0.28348761998729594 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2939 0.1895291435720343 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1968 0.12691165517174668 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.448762966044039E-5 2 0.0 0.0 0.0 0.0 6.448762966044039E-5 3 0.0 0.0 0.0 0.0 6.448762966044039E-5 4 0.0 0.0 0.0 0.0 1.2897525932088077E-4 5 0.0 0.0 0.0 0.0 1.2897525932088077E-4 6 0.0 0.0 0.0 0.0 2.5795051864176155E-4 7 0.0 0.0 0.0 0.0 2.5795051864176155E-4 8 0.0 0.0 0.0 0.0 3.2243814830220193E-4 9 0.0 0.0 0.0 0.0 4.514134076230827E-4 10 0.0 0.0 0.0 6.448762966044039E-5 4.514134076230827E-4 11 0.0 0.0 0.0 1.2897525932088077E-4 4.514134076230827E-4 12 0.0 0.0 0.0 1.2897525932088077E-4 4.514134076230827E-4 13 0.0 0.0 0.0 1.2897525932088077E-4 4.514134076230827E-4 14 0.0 0.0 0.0 1.2897525932088077E-4 4.514134076230827E-4 15 0.0 0.0 0.0 1.9346288898132116E-4 4.514134076230827E-4 16 0.0 0.0 0.0 1.9346288898132116E-4 5.159010372835231E-4 17 0.0 0.0 0.0 1.9346288898132116E-4 5.159010372835231E-4 18 0.0 0.0 0.0 2.5795051864176155E-4 5.159010372835231E-4 19 0.0 0.0 0.0 2.5795051864176155E-4 5.159010372835231E-4 20 0.0 0.0 0.0 3.2243814830220193E-4 5.159010372835231E-4 21 0.0 0.0 0.0 4.514134076230827E-4 5.803886669439634E-4 22 0.0 0.0 0.0 5.159010372835231E-4 5.803886669439634E-4 23 0.0 0.0 0.0 9.028268152461654E-4 7.093639262648442E-4 24 0.0 0.0 0.0 0.0014187278525296884 7.093639262648442E-4 25 0.0 0.0 0.0 0.001999116519473652 7.093639262648442E-4 26 0.0 0.0 0.0 0.0038047701499659826 7.093639262648442E-4 27 0.0 0.0 0.0 0.015670494007487015 7.093639262648442E-4 28 0.0 0.0 0.0 0.053266782099523756 7.093639262648442E-4 29 0.0 0.0 0.0 0.1050503487168574 7.093639262648442E-4 30 0.0 0.0 0.0 0.17153709489677144 7.093639262648442E-4 31 0.0 0.0 0.0 0.37899379951440815 7.093639262648442E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2130 0.0 18.413145 1 CTTATAC 815 0.0 15.88957 37 ACGACGG 75 0.0041052653 14.8 6 GTATCAA 2715 0.0 14.445672 2 TCTTATA 1275 0.0 14.364706 37 TACCCGC 80 0.006299929 13.875 5 GTATAAA 280 0.0 13.214285 1 TAGACGC 85 0.009406666 13.058824 5 CTCTTAT 1930 0.0 12.84456 37 GCGTCAG 175 5.307338E-7 12.685714 1 TCTATAC 175 5.307338E-7 12.685714 3 CGTACAC 105 0.0026442856 12.333334 3 TATACTG 260 3.092282E-10 12.096154 5 GCACCGT 200 2.0406151E-7 12.025001 6 AACGCAG 3245 0.0 11.915255 7 GTTAGGC 125 7.221193E-4 11.84 3 TAGATAG 125 7.221193E-4 11.84 5 GACTGTG 570 0.0 11.68421 7 TATCAAC 3460 0.0 11.656069 3 ATCAACG 3555 0.0 11.344584 4 >>END_MODULE