##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727077.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3145010 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.127623759542896 31.0 31.0 34.0 28.0 34.0 2 31.383651562316178 31.0 31.0 34.0 28.0 34.0 3 31.47986174924722 31.0 31.0 34.0 28.0 34.0 4 35.28566077691327 37.0 35.0 37.0 33.0 37.0 5 34.730950299045155 35.0 35.0 37.0 32.0 37.0 6 34.74756582649976 35.0 35.0 37.0 32.0 37.0 7 34.70635419283246 35.0 35.0 37.0 32.0 37.0 8 34.637141058375015 35.0 35.0 37.0 31.0 37.0 9 36.41585813717604 38.0 35.0 39.0 32.0 39.0 10 36.11219614564023 37.0 35.0 39.0 32.0 39.0 11 36.25308154823037 38.0 35.0 39.0 32.0 39.0 12 36.100457232250456 37.0 35.0 39.0 32.0 39.0 13 36.26942171884986 38.0 35.0 39.0 32.0 39.0 14 37.19953895218139 39.0 36.0 40.0 32.0 41.0 15 37.193730067630945 39.0 36.0 40.0 32.0 41.0 16 37.130611031443465 39.0 36.0 40.0 32.0 41.0 17 37.014879761908546 38.0 36.0 40.0 31.0 41.0 18 37.02355159443054 38.0 36.0 40.0 31.0 41.0 19 37.059234787806716 39.0 36.0 40.0 31.0 41.0 20 36.91812585651556 39.0 36.0 40.0 31.0 41.0 21 36.91176530440285 39.0 36.0 40.0 31.0 41.0 22 36.794156457372154 39.0 36.0 40.0 31.0 41.0 23 36.721492459483436 38.0 36.0 40.0 31.0 41.0 24 36.595077281153316 38.0 35.0 40.0 30.0 41.0 25 36.56474128858096 38.0 35.0 40.0 30.0 41.0 26 36.38664487553299 38.0 35.0 40.0 30.0 41.0 27 36.16692029596091 38.0 35.0 40.0 29.0 41.0 28 36.04252895857247 38.0 35.0 40.0 29.0 41.0 29 35.94721447626558 38.0 34.0 40.0 29.0 41.0 30 35.88499623212645 38.0 34.0 40.0 29.0 41.0 31 35.84918617110915 38.0 34.0 40.0 29.0 41.0 32 35.743716236196384 38.0 34.0 40.0 28.0 41.0 33 35.71926893714169 38.0 34.0 40.0 28.0 41.0 34 35.7151735606564 38.0 34.0 40.0 28.0 41.0 35 35.59846359788999 38.0 34.0 40.0 27.0 41.0 36 35.51084066505353 38.0 34.0 40.0 27.0 41.0 37 35.35069395645801 38.0 34.0 40.0 27.0 41.0 38 35.297144365200744 38.0 34.0 40.0 27.0 41.0 39 35.19018635870792 38.0 33.0 40.0 26.0 41.0 40 35.115157980419774 38.0 33.0 40.0 26.0 41.0 41 35.06154288857587 38.0 33.0 40.0 26.0 41.0 42 35.005433687015305 38.0 33.0 40.0 26.0 41.0 43 33.632019929984324 36.0 31.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 3.0 12 2.0 13 2.0 14 4.0 15 12.0 16 26.0 17 77.0 18 175.0 19 370.0 20 847.0 21 1794.0 22 3474.0 23 6150.0 24 10553.0 25 16788.0 26 25474.0 27 36889.0 28 52156.0 29 71544.0 30 93790.0 31 121609.0 32 152930.0 33 193781.0 34 244842.0 35 314849.0 36 412505.0 37 543520.0 38 630009.0 39 210832.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.472046193811785 19.37453299035615 12.952836397976478 26.200584417855588 2 18.872149850079968 20.94915437470787 35.0448488240101 25.133846951202067 3 20.191032778910085 22.67550818598351 29.68111389152976 27.45234514357665 4 15.562398847698416 15.974257633521038 33.79388300832112 34.66946051045943 5 15.63883739638348 35.37979211512841 33.74685613082311 15.234514357664999 6 35.484465868153045 34.371719008842575 15.05419696598739 15.08961815701699 7 29.387505922079736 29.879936788754247 21.267213776744747 19.465343512421267 8 26.252348959144804 34.870540952175034 19.476663031278118 19.400447057402044 9 26.246339439302258 14.864722210740188 19.61866575940935 39.2702725905482 10 17.18789447410342 26.43737221821234 33.26024400558345 23.11448930210079 11 35.85203226698802 21.63182311026038 21.421489915771332 21.094654706980265 12 21.32085430570968 24.705772000724956 30.280825816134133 23.692547877431235 13 30.72588004489652 19.791479200384103 24.239096219089923 25.243544535629457 14 22.275477661438277 20.515101700789504 25.41022127115653 31.79919936661569 15 25.05642271407722 27.609387569514883 22.30736945192543 25.026820264482463 16 24.67756859278667 26.072985459505695 24.425391334208793 24.824054613498845 17 24.06663253852929 26.304177093236586 25.422494682051884 24.20669568618224 18 24.263356873269085 25.439346774732037 25.965481826766844 24.331814525232033 19 24.954801415575787 25.218584360622064 26.270727279086554 23.5558869447156 20 24.48618605346247 25.201954842750894 26.168819812973567 24.143039290813064 21 24.305264530160475 25.250126390695097 26.313938588430563 24.13067049071386 22 24.72656684716424 25.052130199903978 25.88688112279452 24.334421830137266 23 24.388730083529143 25.08675648090149 25.887453458017625 24.63705997755174 24 24.32377003570736 25.28160482796557 25.822016464176585 24.572608672150487 25 24.689524039669188 25.010222543012585 25.79530748709861 24.50494593021962 26 24.40580475101828 25.217566875781 25.94732608163408 24.42930229156664 27 24.505772636652985 25.56993459480256 25.64853529877488 24.27575746976957 28 24.464882464602656 25.349935294323387 25.844083166667197 24.341099074406756 29 24.310542732773506 25.621095004467392 25.942938178256984 24.125424084502118 30 24.449524802782822 25.490634370002002 25.75727899116378 24.302561836051396 31 24.472640786515782 24.94001608897905 26.111204733848226 24.476138390656946 32 24.00297614316012 25.433464440494625 26.017309960858633 24.546249455486628 33 24.143325458424616 25.1166450981078 26.010664512990424 24.729364930477168 34 24.4882210231446 24.874070352717478 26.296641346132443 24.341067278005475 35 24.200972333951242 25.129045694608283 26.218835552192203 24.45114641924827 36 24.124915342081582 24.859030654910477 26.371076721536657 24.644977281471284 37 24.020209792655667 24.482593060117456 26.726433302278846 24.77076384494803 38 23.75521858436062 24.557378195935783 26.999818760512685 24.68758445919091 39 23.567397241980153 24.45597947224333 27.313681037580167 24.662942248196348 40 23.635409744325138 24.34930254593785 27.56703476300552 24.44825294673149 41 23.40157900928773 24.352704760875163 27.59571511696306 24.650001112874044 42 23.096587928178288 24.647425604370095 27.435238679686236 24.82074778776538 43 23.069878951100314 24.33175093242947 27.47854537823409 25.119824738236122 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1071.0 1 937.0 2 803.0 3 1478.5 4 2154.0 5 2154.0 6 2658.0 7 3162.0 8 2983.0 9 2804.0 10 3793.0 11 4782.0 12 4782.0 13 8032.0 14 11282.0 15 13993.0 16 16704.0 17 16194.5 18 15685.0 19 15685.0 20 18911.5 21 22138.0 22 21100.5 23 20063.0 24 24115.0 25 28167.0 26 28167.0 27 34404.5 28 40642.0 29 47196.0 30 53750.0 31 63130.0 32 72510.0 33 72510.0 34 83743.5 35 94977.0 36 107756.0 37 120535.0 38 135038.5 39 149542.0 40 149542.0 41 165134.0 42 180726.0 43 195569.5 44 210413.0 45 224499.5 46 238586.0 47 238586.0 48 251448.5 49 264311.0 50 270144.5 51 275978.0 52 273237.0 53 270496.0 54 270496.0 55 259751.0 56 249006.0 57 233382.5 58 217759.0 59 198564.5 60 179370.0 61 179370.0 62 157354.0 63 135338.0 64 115490.0 65 95642.0 66 79300.5 67 62959.0 68 62959.0 69 51597.5 70 40236.0 71 32719.5 72 25203.0 73 20544.0 74 15885.0 75 15885.0 76 12902.0 77 9919.0 78 7926.0 79 5933.0 80 4643.0 81 3353.0 82 3353.0 83 2557.5 84 1762.0 85 1333.0 86 904.0 87 617.5 88 331.0 89 331.0 90 210.0 91 89.0 92 59.5 93 30.0 94 20.0 95 10.0 96 10.0 97 5.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3145010.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.71129850309614 #Duplication Level Percentage of deduplicated Percentage of total 1 83.30316706159488 53.07352942914556 2 8.925700282478553 11.373359100923212 3 2.9198542475917253 5.580831166615487 4 1.3539667200833223 3.4505191146594623 5 0.8163922653017117 2.60067056551281 6 0.5393190175764377 2.0616428950325383 7 0.40144051531010494 1.7903407551511181 8 0.27391461838131403 1.396116481284285 9 0.22187578580079603 1.2722394977787181 >10 1.1800839602757454 13.233712436484272 >50 0.05241472247965771 2.211681922622341 >100 0.01137164413449062 1.0280083464854393 >500 1.4974769741432008E-4 0.07956877288586194 >1k 1.996635965509394E-4 0.2263353143985436 >5k 1.4974769741320454E-4 0.6214442010203655 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7765 0.2468990559648459 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6766 0.21513445108282647 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5010 0.1592999704293468 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3611 0.11481680503400626 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.1796401283302755E-5 2 0.0 0.0 0.0 0.0 3.1796401283302755E-5 3 0.0 0.0 0.0 0.0 3.1796401283302755E-5 4 0.0 0.0 0.0 0.0 6.359280256660551E-5 5 0.0 0.0 0.0 0.0 6.359280256660551E-5 6 0.0 0.0 0.0 0.0 6.359280256660551E-5 7 0.0 0.0 0.0 0.0 6.359280256660551E-5 8 0.0 0.0 0.0 0.0 9.538920384990827E-5 9 0.0 0.0 0.0 0.0 1.9077840769981654E-4 10 0.0 0.0 0.0 0.0 1.9077840769981654E-4 11 0.0 0.0 0.0 0.0 1.9077840769981654E-4 12 0.0 0.0 0.0 0.0 1.9077840769981654E-4 13 0.0 0.0 0.0 0.0 2.2257480898311928E-4 14 0.0 0.0 0.0 3.1796401283302755E-5 2.861676115497248E-4 15 0.0 0.0 0.0 3.1796401283302755E-5 3.1796401283302756E-4 16 0.0 0.0 0.0 6.359280256660551E-5 3.497604141163303E-4 17 0.0 0.0 0.0 9.538920384990827E-5 3.497604141163303E-4 18 0.0 0.0 0.0 1.2718560513321102E-4 4.1335321668293585E-4 19 0.0 0.0 0.0 1.5898200641651378E-4 4.1335321668293585E-4 20 0.0 0.0 0.0 1.9077840769981654E-4 4.1335321668293585E-4 21 0.0 0.0 0.0 3.1796401283302756E-4 4.1335321668293585E-4 22 0.0 0.0 0.0 5.087424205328441E-4 4.1335321668293585E-4 23 0.0 3.1796401283302755E-5 0.0 6.677244269493579E-4 6.677244269493579E-4 24 0.0 3.1796401283302755E-5 0.0 8.585028346491745E-4 6.677244269493579E-4 25 0.0 3.1796401283302755E-5 0.0 0.001558023662881835 6.677244269493579E-4 26 0.0 3.1796401283302755E-5 0.0 0.0032432329308968813 6.995208282326606E-4 27 0.0 3.1796401283302755E-5 0.0 0.012019039685088441 6.995208282326606E-4 28 0.0 3.1796401283302755E-5 0.0 0.041939453292676336 6.995208282326606E-4 29 3.1796401283302755E-5 3.1796401283302755E-5 0.0 0.0841968705981857 6.995208282326606E-4 30 3.1796401283302755E-5 3.1796401283302755E-5 0.0 0.14006314765294864 6.995208282326606E-4 31 3.1796401283302755E-5 3.1796401283302755E-5 0.0 0.3344027522964951 7.313172295159634E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2900 0.0 19.010344 1 CTTATAC 1545 0.0 15.805826 37 TCTTATA 2370 0.0 13.894514 37 GTATCAA 4110 0.0 13.278588 2 CTCTTAT 3640 0.0 12.350274 37 TTATACT 560 0.0 12.223215 4 TAGACTA 200 2.043198E-7 12.025001 5 AAGCGTA 125 7.224826E-4 11.84 5 GTACTAG 205 2.8154318E-7 11.731707 1 TAGACAG 680 0.0 11.426471 5 TCTCTTA 5310 0.0 11.322976 37 GTAGCAC 360 0.0 11.305554 3 TAGCACA 480 0.0 11.177083 4 TTAGACT 315 5.638867E-11 11.1587305 4 GTACTAC 370 0.0 11.0 1 TATACTT 560 0.0 10.901786 5 GGTATAT 310 4.984031E-10 10.741935 1 ACCGACC 295 2.5138434E-9 10.661016 8 AACGCAG 5070 0.0 10.654833 7 CGTGCGA 140 0.0018634528 10.571429 10 >>END_MODULE