##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727075.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2767053 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.1624012984211 31.0 31.0 34.0 28.0 34.0 2 31.398347266929836 31.0 31.0 34.0 30.0 34.0 3 31.470804498504364 31.0 31.0 34.0 28.0 34.0 4 35.27065039954059 37.0 35.0 37.0 33.0 37.0 5 34.61572257560661 35.0 35.0 37.0 30.0 37.0 6 34.64079148465895 35.0 35.0 37.0 31.0 37.0 7 34.612288597291055 35.0 35.0 37.0 31.0 37.0 8 34.552401056286236 35.0 35.0 37.0 30.0 37.0 9 36.24485074915442 37.0 35.0 39.0 32.0 39.0 10 35.93406523113218 37.0 35.0 39.0 30.0 39.0 11 36.08924657388203 37.0 35.0 39.0 32.0 39.0 12 35.94097474822492 37.0 35.0 39.0 31.0 39.0 13 36.076235619628534 37.0 35.0 39.0 32.0 39.0 14 36.997554437880304 38.0 36.0 40.0 32.0 41.0 15 36.9207405857423 38.0 36.0 40.0 31.0 41.0 16 36.8416242840307 38.0 36.0 40.0 31.0 41.0 17 36.79914443272319 38.0 36.0 40.0 31.0 41.0 18 36.78995667954318 38.0 36.0 40.0 31.0 41.0 19 36.839892839060184 38.0 36.0 40.0 31.0 41.0 20 36.73720597328638 38.0 36.0 40.0 31.0 41.0 21 36.65482048952441 38.0 36.0 40.0 31.0 41.0 22 36.56578569329897 38.0 35.0 40.0 30.0 41.0 23 36.47902262804507 38.0 35.0 40.0 30.0 41.0 24 36.35901336186911 38.0 35.0 40.0 30.0 41.0 25 36.312210138367426 38.0 35.0 40.0 30.0 41.0 26 36.06779487057169 38.0 35.0 40.0 29.0 41.0 27 35.88224873177348 38.0 34.0 40.0 29.0 41.0 28 35.75938082862887 38.0 34.0 40.0 28.0 41.0 29 35.61330303394984 38.0 34.0 40.0 27.0 41.0 30 35.527430446760505 38.0 34.0 40.0 27.0 41.0 31 35.45357533809435 38.0 34.0 40.0 27.0 41.0 32 35.31380822846545 38.0 34.0 40.0 27.0 41.0 33 35.20333979869558 38.0 34.0 40.0 27.0 41.0 34 35.13363856781926 38.0 34.0 40.0 26.0 41.0 35 35.0206147117529 38.0 33.0 40.0 26.0 41.0 36 34.85280585518239 38.0 33.0 40.0 25.0 41.0 37 34.744607349407474 38.0 33.0 40.0 25.0 41.0 38 34.66337218694402 38.0 33.0 40.0 25.0 41.0 39 34.518029831737955 37.0 33.0 40.0 24.0 40.0 40 34.39130331077865 37.0 33.0 40.0 24.0 40.0 41 34.31131749193094 37.0 33.0 40.0 24.0 40.0 42 34.10498750837082 37.0 33.0 40.0 24.0 40.0 43 32.793188637875744 36.0 30.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 4.0 13 9.0 14 9.0 15 32.0 16 71.0 17 163.0 18 356.0 19 713.0 20 1441.0 21 2850.0 22 4910.0 23 8315.0 24 13252.0 25 19739.0 26 28612.0 27 39752.0 28 53550.0 29 69983.0 30 90025.0 31 112343.0 32 140722.0 33 176283.0 34 225040.0 35 291967.0 36 387593.0 37 490693.0 38 475776.0 39 132845.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 41.84173559378877 19.71509038677611 13.49815128224866 24.94502273718646 2 19.065482301929165 21.770959934630817 34.89665720172328 24.266900561716742 3 20.74951220666897 23.1377570288679 30.106217698034698 26.006513066428433 4 15.803564297467378 16.45902698647261 33.60969233332358 34.12771638273643 5 15.450806327164676 35.82204605405101 33.650204748517645 15.076942870266672 6 34.848808461565426 34.54888648681467 14.891908467239334 15.710396584380568 7 28.591790616226 30.414451765108947 21.520151583652357 19.4736060350127 8 26.29064206576455 34.95357696437329 19.531465425490584 19.224315544371574 9 25.970301255523477 15.117925099374677 20.124515143005933 38.78725850209591 10 17.553837964072248 26.98784591404646 32.79362556481571 22.664690557065587 11 34.923436594817666 22.295344541647736 21.349067039915752 21.43215182361885 12 21.136964127539297 25.668500025116973 30.070692538234724 23.123843309109006 13 30.95137678967479 20.078654077099355 24.414096874906264 24.555872258319592 14 22.003626240624953 21.38043615355398 26.07286524688902 30.54307235893205 15 25.03482947381203 27.89230997743809 22.916799931190333 24.15606061755955 16 23.892639569968484 26.28890736823617 25.372408840741397 24.44604422105395 17 23.493839836099994 26.847082437524687 26.07452766535372 23.5845500610216 18 23.644035730432343 25.51996654924933 26.868187924119997 23.96780979619834 19 24.44550212807633 25.59022179914877 27.312668026235855 22.651608046539042 20 24.050460905519337 25.594377845310518 27.08719348707813 23.267967762092017 21 23.66019010116539 25.86152126468123 27.257193844859493 23.22109478929388 22 24.0935030879423 25.754548250431053 26.694320636431613 23.457628025195035 23 23.712520143271558 25.75382545979423 26.71448649519904 23.819167901735167 24 23.62900168518637 25.871134380151013 26.76959928125699 23.730264653405627 25 24.006226118545616 25.595787287052325 26.635124083275603 23.76286251112646 26 23.56304703957604 25.892673541128413 27.026515213116625 23.51776420617892 27 23.87836445489118 26.088983478090228 26.721063889994156 23.311588177024436 28 23.706520980985907 26.028811157574506 26.77523704822423 23.48943081321536 29 23.461567234165734 26.280559136380838 27.000783866445637 23.257089763007794 30 23.56496243476363 26.288509833385916 26.819507974729795 23.327019757120663 31 23.695968237688255 25.656429421481985 27.073713441701337 23.573888899128423 32 23.23551446249855 26.21305049090133 26.827205695011987 23.724229351588132 33 23.399334960335057 25.86065391591704 26.801474348341 23.938536775406906 34 23.65213098556479 25.815913175497542 27.00273540116507 23.529220437772604 35 23.420368167866677 25.92444018961689 26.98784591404646 23.667345728469964 36 23.38863765891004 25.618229936325758 27.161677062202997 23.8314553425612 37 23.209927673954926 25.275591034938614 27.486463034860552 24.028018256245907 38 22.992476110865965 25.353146470269994 27.83596844729754 23.8184089715665 39 22.756412688878747 25.24548680491483 28.18511246441611 23.81298804179031 40 22.85991630807216 25.19727666943857 28.2674021784187 23.67540484407057 41 22.593459539806428 25.146319929542372 28.309613151609312 23.95060737904189 42 22.28179221720726 25.45618027554947 28.134553259370165 24.1274742478731 43 22.352625699616162 25.108373421109025 28.033976942255894 24.505023937018915 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1572.0 1 1263.0 2 954.0 3 1704.0 4 2454.0 5 2454.0 6 3354.5 7 4255.0 8 4370.5 9 4486.0 10 6557.5 11 8629.0 12 8629.0 13 14183.0 14 19737.0 15 26094.5 16 32452.0 17 28788.0 18 25124.0 19 25124.0 20 28380.5 21 31637.0 22 26714.5 23 21792.0 24 25432.5 25 29073.0 26 29073.0 27 34428.0 28 39783.0 29 45087.5 30 50392.0 31 58412.5 32 66433.0 33 66433.0 34 76043.0 35 85653.0 36 97249.0 37 108845.0 38 121461.0 39 134077.0 40 134077.0 41 146471.5 42 158866.0 43 171809.5 44 184753.0 45 196125.0 46 207497.0 47 207497.0 48 218553.0 49 229609.0 50 233419.5 51 237230.0 52 233834.5 53 230439.0 54 230439.0 55 218203.0 56 205967.0 57 191399.5 58 176832.0 59 161047.5 60 145263.0 61 145263.0 62 127293.0 63 109323.0 64 92979.5 65 76636.0 66 63886.5 67 51137.0 68 51137.0 69 42025.5 70 32914.0 71 26899.0 72 20884.0 73 16981.5 74 13079.0 75 13079.0 76 10707.5 77 8336.0 78 6695.5 79 5055.0 80 3999.0 81 2943.0 82 2943.0 83 2252.0 84 1561.0 85 1180.0 86 799.0 87 603.0 88 407.0 89 407.0 90 267.0 91 127.0 92 79.5 93 32.0 94 22.0 95 12.0 96 12.0 97 6.0 98 0.0 99 2.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2767053.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.34440779232726 #Duplication Level Percentage of deduplicated Percentage of total 1 84.00870707829152 53.21481799273467 2 8.617278593447375 10.917128185668455 3 2.742359066733289 5.211393331084184 4 1.3399455077850084 3.395122186585224 5 0.7700863614869959 2.43903322586709 6 0.5104694175887975 1.9401229771953952 7 0.3475433737896955 1.5410450436398988 8 0.2563287968095995 1.2989596667219094 9 0.2071185255182697 1.1807820307597332 >10 1.1267884566996382 12.684577347461975 >50 0.05519617053169236 2.3543856686457896 >100 0.016923105114662062 1.696818810391083 >500 6.848433837132584E-4 0.296400672738584 >1k 3.424216918380402E-4 0.3333829740062607 >5k 1.141405639460134E-4 0.5275490934367125 >10k+ 1.141405639460134E-4 0.96848079306308 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13460 0.4864380985835833 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13330 0.4817399594442173 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8423 0.30440327669907297 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6170 0.22298091146067672 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.613953184127662E-5 0.0 5 0.0 0.0 0.0 3.613953184127662E-5 0.0 6 0.0 0.0 0.0 3.613953184127662E-5 0.0 7 3.613953184127662E-5 0.0 0.0 3.613953184127662E-5 0.0 8 3.613953184127662E-5 0.0 0.0 3.613953184127662E-5 3.613953184127662E-5 9 3.613953184127662E-5 0.0 0.0 1.0841859552382987E-4 3.613953184127662E-5 10 3.613953184127662E-5 0.0 0.0 1.0841859552382987E-4 3.613953184127662E-5 11 3.613953184127662E-5 0.0 0.0 1.0841859552382987E-4 3.613953184127662E-5 12 3.613953184127662E-5 0.0 0.0 1.4455812736510648E-4 7.227906368255324E-5 13 3.613953184127662E-5 0.0 0.0 1.8069765920638312E-4 7.227906368255324E-5 14 3.613953184127662E-5 0.0 0.0 1.8069765920638312E-4 1.4455812736510648E-4 15 7.227906368255324E-5 0.0 0.0 2.1683719104765973E-4 2.1683719104765973E-4 16 1.0841859552382987E-4 0.0 0.0 2.5297672288893634E-4 2.8911625473021296E-4 17 1.0841859552382987E-4 0.0 0.0 3.2525578657148957E-4 2.8911625473021296E-4 18 1.0841859552382987E-4 0.0 0.0 3.6139531841276624E-4 2.8911625473021296E-4 19 1.0841859552382987E-4 0.0 0.0 6.143720413017026E-4 2.8911625473021296E-4 20 1.0841859552382987E-4 0.0 0.0 7.227906368255325E-4 3.9753485025404285E-4 21 1.0841859552382987E-4 0.0 0.0 0.0011926045507621285 4.3367438209531946E-4 22 1.0841859552382987E-4 0.0 0.0 0.0018792556557463843 4.3367438209531946E-4 23 1.0841859552382987E-4 0.0 0.0 0.002385209101524257 5.782325094604259E-4 24 1.0841859552382987E-4 0.0 0.0 0.003650092715968939 5.782325094604259E-4 25 1.0841859552382987E-4 0.0 0.0 0.0045174414801595775 5.782325094604259E-4 26 1.4455812736510648E-4 0.0 0.0 0.006468976199588515 5.782325094604259E-4 27 1.4455812736510648E-4 0.0 0.0 0.019551486726130652 5.782325094604259E-4 28 1.4455812736510648E-4 0.0 0.0 0.058473762519185575 5.782325094604259E-4 29 1.4455812736510648E-4 0.0 0.0 0.12999389603307202 5.782325094604259E-4 30 1.4455812736510648E-4 0.0 0.0 0.21709016777054865 5.782325094604259E-4 31 1.4455812736510648E-4 0.0 0.0 0.4424201488009084 5.782325094604259E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1655 0.0 14.755287 37 ATACCGT 235 5.638867E-11 13.382979 6 CTCTTAT 3685 0.0 13.354138 37 GGTATCA 8300 0.0 13.172892 1 TATACTG 370 0.0 12.5 5 GTATTAT 315 0.0 12.333334 1 TCTCTTA 5355 0.0 12.264238 37 TCTTATA 2360 0.0 11.836864 37 TATACCG 160 3.767138E-5 11.562501 5 GTATTAG 260 3.979949E-9 11.384615 1 ACCCGAC 525 0.0 11.276191 11 TACCGTG 280 1.0604708E-9 11.232143 7 GTACTAA 165 5.1561026E-5 11.212121 1 CAATACT 485 0.0 11.061855 4 GGGTAAG 670 0.0 11.044776 1 TATAACG 135 0.0013760333 10.962963 2 GTAAGAG 660 0.0 10.931818 3 AATACCG 120 0.0071666646 10.791666 5 TACCGAC 120 0.0071666646 10.791666 7 AGTACTA 190 1.8286002E-5 10.710526 5 >>END_MODULE