##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727074.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7338045 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.751131806904972 31.0 31.0 34.0 30.0 34.0 2 31.9866311803757 33.0 31.0 34.0 30.0 34.0 3 32.08645395333498 33.0 31.0 34.0 30.0 34.0 4 35.75079983837657 37.0 35.0 37.0 35.0 37.0 5 35.40371693005426 37.0 35.0 37.0 33.0 37.0 6 35.41463850385218 37.0 35.0 37.0 33.0 37.0 7 35.38193292627668 37.0 35.0 37.0 33.0 37.0 8 35.34458169716866 37.0 35.0 37.0 33.0 37.0 9 37.123536037187016 39.0 37.0 39.0 33.0 39.0 10 36.91898741422273 39.0 37.0 39.0 33.0 39.0 11 37.01212530040358 39.0 37.0 39.0 33.0 39.0 12 36.907808823739835 39.0 37.0 39.0 33.0 39.0 13 36.9893084602234 39.0 37.0 39.0 33.0 39.0 14 38.122726012173544 40.0 37.0 41.0 33.0 41.0 15 38.061781032959054 40.0 37.0 41.0 33.0 41.0 16 38.01696787087024 40.0 37.0 41.0 33.0 41.0 17 37.96458511769824 40.0 37.0 41.0 33.0 41.0 18 37.96077388459733 40.0 37.0 41.0 33.0 41.0 19 38.00642923285425 40.0 37.0 41.0 33.0 41.0 20 37.91836054425941 40.0 37.0 41.0 33.0 41.0 21 37.85566714295156 40.0 37.0 41.0 33.0 41.0 22 37.78597978071816 39.0 37.0 41.0 33.0 41.0 23 37.72507772846855 39.0 37.0 41.0 32.0 41.0 24 37.6342993263192 39.0 37.0 41.0 32.0 41.0 25 37.59814773553447 39.0 37.0 41.0 32.0 41.0 26 37.41591909016638 39.0 37.0 41.0 32.0 41.0 27 37.2734597566518 39.0 36.0 40.0 31.0 41.0 28 37.188685951094605 39.0 36.0 40.0 31.0 41.0 29 37.086828440000026 39.0 36.0 40.0 31.0 41.0 30 37.0232200810979 39.0 36.0 40.0 31.0 41.0 31 36.98234189078971 39.0 36.0 40.0 31.0 41.0 32 36.867780042231956 39.0 36.0 40.0 30.0 41.0 33 36.7792166714704 39.0 36.0 40.0 30.0 41.0 34 36.73784393527159 39.0 35.0 40.0 30.0 41.0 35 36.65679877951143 39.0 35.0 40.0 30.0 41.0 36 36.53206828249213 39.0 35.0 40.0 30.0 41.0 37 36.44601211903171 39.0 35.0 40.0 30.0 41.0 38 36.404176725544744 39.0 35.0 40.0 30.0 41.0 39 36.30114369699287 39.0 35.0 40.0 30.0 41.0 40 36.20969508908708 38.0 35.0 40.0 30.0 41.0 41 36.15583701108402 38.0 35.0 40.0 29.0 41.0 42 36.007728625267355 38.0 35.0 40.0 29.0 41.0 43 34.70420364007035 38.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 15.0 11 23.0 12 10.0 13 9.0 14 13.0 15 16.0 16 53.0 17 136.0 18 270.0 19 588.0 20 1390.0 21 2767.0 22 5432.0 23 9594.0 24 16237.0 25 25828.0 26 39555.0 27 57064.0 28 81448.0 29 110434.0 30 148225.0 31 192311.0 32 246476.0 33 317083.0 34 414368.0 35 554090.0 36 778524.0 37 1169511.0 38 1910695.0 39 1255872.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.33029369539162 18.755554101944046 12.976998642008871 25.937153560655464 2 18.646683142444616 20.642323670677953 35.70181158605596 25.009181600821474 3 20.22908008877024 22.273670984574228 29.833763625052722 27.663485301602815 4 15.3693797189851 15.743989032501164 33.70377259883252 35.182858649681215 5 15.673806851824976 35.351513925030446 33.64727253648622 15.327406686658367 6 35.5365768402892 33.973122268942205 15.011614128831315 15.478686761937274 7 29.32426824855939 29.954994824915897 21.140835195205263 19.579901731319445 8 26.27022592529754 34.94557474095621 19.421521672325532 19.36267766142072 9 26.312689551508612 15.014435043666264 19.72092021785094 38.95195518697419 10 17.551159743501163 26.486809497625046 32.82243431322648 23.13959644564731 11 35.63742113873654 21.728621179074263 21.306506024424763 21.32745165776443 12 21.46239223117329 24.79447863838393 30.131758526964607 23.611370603478175 13 30.953966621899976 19.754226091554358 24.18033686083964 25.111470425706027 14 22.285826810819504 20.642310043070054 25.557270362882754 31.514592783227684 15 25.167847839581253 27.384405519453754 22.565015613831747 24.882731027133246 16 24.514240509563514 26.02548771505217 24.638646942066995 24.821624833317323 17 23.989931923284743 26.26070022737664 25.579156301167412 24.17021154817121 18 24.192560825124403 25.29240417577161 26.19100864058479 24.324026358519195 19 24.980958824864118 25.193794805019593 26.511679882039424 23.313566488076866 20 24.532637780226203 25.1093036360502 26.383117029126968 23.974941554596626 21 24.23900371284177 25.280520901684305 26.58146686208656 23.899008523387362 22 24.744874145634157 25.069756317929365 26.016057410386555 24.16931212604992 23 24.24420945905892 25.222603568116575 26.03395045955701 24.499236513267498 24 24.22262332814803 25.280139328663154 26.090082576490058 24.40715476669876 25 24.604141838868525 24.97032929070345 25.988338855921434 24.437190014506587 26 24.21585040702258 25.347664125799174 26.20587636080182 24.230609106376424 27 24.409839405454722 25.55121970497592 25.966793607834237 24.07214728173512 28 24.26162554195293 25.481964201636814 26.019736864519093 24.236673391891163 29 24.12002106828181 25.74553576599762 26.22507766033051 23.90936550539006 30 24.294795139577367 25.602037054828635 26.0650759159967 24.038091889597297 31 24.310739440818367 25.050282466242713 26.278606904154987 24.360371188783933 32 23.867269824592245 25.511658759247187 26.211245638313745 24.409825777846823 33 23.988228472297457 25.135155208233257 26.20588998840972 24.670726331059566 34 24.258845509941683 24.995472227275794 26.545612625706166 24.20006963707636 35 24.00246932255117 25.075071085009697 26.530663139841742 24.39179645259739 36 23.892140209006623 24.75832459462977 26.800353500148884 24.549181696214728 37 23.698614549243022 24.338703292225656 27.198579458152683 24.764102700378643 38 23.49050734902825 24.33499658287732 27.559847343536326 24.61464872455811 39 23.21239512703997 24.22863310323117 28.012447457054297 24.54652431267456 40 23.3587147530439 24.188881370991865 28.078745769479475 24.373658106484765 41 22.913814237988454 24.24163384116614 28.20204836574319 24.64250355510221 42 22.54303428229181 24.59225856478122 28.074507583423102 24.790199569503866 43 22.48856473352235 24.27668404868054 28.07191833792243 25.16283287987468 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3989.0 1 3403.5 2 2818.0 3 4951.5 4 7085.0 5 7085.0 6 8733.5 7 10382.0 8 9693.5 9 9005.0 10 12988.0 11 16971.0 12 16971.0 13 26923.0 14 36875.0 15 46440.5 16 56006.0 17 51264.5 18 46523.0 19 46523.0 20 53435.5 21 60348.0 22 53829.0 23 47310.0 24 56082.5 25 64855.0 26 64855.0 27 77889.0 28 90923.0 29 104912.5 30 118902.0 31 138072.5 32 157243.0 33 157243.0 34 182137.5 35 207032.0 36 237248.0 37 267464.0 38 301795.5 39 336127.0 40 336127.0 41 372564.5 42 409002.0 43 448177.0 44 487352.0 45 521847.0 46 556342.0 47 556342.0 48 590665.5 49 624989.0 50 638555.5 51 652122.0 52 644914.0 53 637706.0 54 637706.0 55 610848.0 56 583990.0 57 545781.5 58 507573.0 59 463007.0 60 418441.0 61 418441.0 62 366972.0 63 315503.0 64 268376.0 65 221249.0 66 183612.5 67 145976.0 68 145976.0 69 119445.5 70 92915.0 71 75288.5 72 57662.0 73 47242.0 74 36822.0 75 36822.0 76 29707.5 77 22593.0 78 18080.5 79 13568.0 80 10454.0 81 7340.0 82 7340.0 83 5610.5 84 3881.0 85 2885.5 86 1890.0 87 1366.5 88 843.0 89 843.0 90 571.5 91 300.0 92 191.5 93 83.0 94 61.0 95 39.0 96 39.0 97 21.0 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 7338045.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.68071510051292 #Duplication Level Percentage of deduplicated Percentage of total 1 79.17165098875087 42.499908407643765 2 10.613624645071901 11.394939215117745 3 3.6683653767675932 5.907614300245407 4 1.8024786476489645 3.870333710368074 5 1.0387695912015218 2.788094724018258 6 0.7201056274879716 2.3193471018874727 7 0.4956692658832876 1.8625516452172803 8 0.3631655581549103 1.5595989489305995 9 0.27220122609025177 1.3150760820984997 >10 1.6928200230456887 16.97033956176127 >50 0.11782582634352164 4.2905026878089965 >100 0.04228209737947975 3.611436954914297 >500 7.110536628564638E-4 0.2409278959017447 >1k 2.285117387087105E-4 0.32757470162804625 >5k 0.0 0.0 >10k+ 1.0156077246912477E-4 1.0417540624585075 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 24182 0.3295428141964242 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 23617 0.321843215733891 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 16519 0.22511445487183576 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12115 0.16509846968777106 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 1.3627607898288985E-5 0.0 0.0 0.0 0.0 3 1.3627607898288985E-5 0.0 0.0 0.0 0.0 4 1.3627607898288985E-5 0.0 0.0 0.0 2.725521579657797E-5 5 1.3627607898288985E-5 0.0 0.0 0.0 2.725521579657797E-5 6 1.3627607898288985E-5 0.0 0.0 0.0 9.53932552880229E-5 7 1.3627607898288985E-5 0.0 0.0 0.0 9.53932552880229E-5 8 1.3627607898288985E-5 0.0 0.0 0.0 1.0902086318631188E-4 9 4.088282369486696E-5 0.0 0.0 0.0 2.3166933427091276E-4 10 4.088282369486696E-5 0.0 0.0 0.0 2.3166933427091276E-4 11 4.088282369486696E-5 0.0 0.0 2.725521579657797E-5 2.3166933427091276E-4 12 4.088282369486696E-5 0.0 0.0 4.088282369486696E-5 2.3166933427091276E-4 13 4.088282369486696E-5 0.0 0.0 6.813803949144492E-5 2.725521579657797E-4 14 4.088282369486696E-5 0.0 0.0 6.813803949144492E-5 3.952006290503806E-4 15 4.088282369486696E-5 0.0 0.0 9.53932552880229E-5 5.042214922366925E-4 16 4.088282369486696E-5 0.0 0.0 1.4990368688117884E-4 5.587319238298484E-4 17 4.088282369486696E-5 0.0 0.0 2.044141184743348E-4 5.587319238298484E-4 18 4.088282369486696E-5 0.0 0.0 2.1804172637262376E-4 6.404975712195823E-4 19 6.813803949144492E-5 0.0 0.0 2.4529694216920175E-4 6.404975712195823E-4 20 6.813803949144492E-5 0.0 0.0 3.2706258955893567E-4 6.404975712195823E-4 21 6.813803949144492E-5 0.0 0.0 6.950080028127383E-4 6.813803949144493E-4 22 6.813803949144492E-5 0.0 0.0 0.0011992294950494307 6.813803949144493E-4 23 6.813803949144492E-5 0.0 0.0 0.0016353129477946783 8.85794513388784E-4 24 6.813803949144492E-5 0.0 0.0 0.0025347350690817514 8.99422121287073E-4 25 6.813803949144492E-5 0.0 0.0 0.003515922837758558 8.99422121287073E-4 26 6.813803949144492E-5 0.0 0.0 0.0059961474752471535 8.99422121287073E-4 27 6.813803949144492E-5 0.0 0.0 0.02378017578251428 8.99422121287073E-4 28 6.813803949144492E-5 0.0 0.0 0.07488370540109798 9.13049729185362E-4 29 6.813803949144492E-5 0.0 0.0 0.15163439308426155 9.13049729185362E-4 30 6.813803949144492E-5 0.0 0.0 0.25295565780804014 9.13049729185362E-4 31 6.813803949144492E-5 0.0 0.0 0.5510186977594168 9.4030494498194E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 4945 0.0 16.199192 37 GGTATCA 11655 0.0 16.047619 1 TCTTATA 8120 0.0 14.854679 37 CTCTTAT 12295 0.0 12.609191 37 GTTCGAC 345 0.0 12.333334 11 GTATCAA 15545 0.0 11.9961405 2 CGTATAC 250 2.1518645E-9 11.84 3 GGACCGT 505 0.0 11.722772 6 TAGTACT 760 0.0 10.953947 4 TCTCTTA 17645 0.0 10.851517 37 CGCGAAA 240 1.8466017E-7 10.791667 10 GTCTTAG 1055 0.0 10.696683 1 TCTATAC 850 0.0 10.664706 3 TATACCG 350 3.45608E-11 10.571428 5 GTATTAG 690 0.0 10.456522 1 AACGCAG 17740 0.0 10.428411 7 TAGACAG 1495 0.0 10.270903 5 GGGTAAG 2035 0.0 10.090909 1 GTACTAC 625 0.0 10.064 1 TAAGACT 1130 0.0 9.986726 4 >>END_MODULE