##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727072.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3564002 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.6129873103326 31.0 31.0 34.0 30.0 34.0 2 31.847887010164417 31.0 31.0 34.0 30.0 34.0 3 31.954782573073754 33.0 31.0 34.0 30.0 34.0 4 35.68820107283891 37.0 35.0 37.0 33.0 37.0 5 35.30077845074161 37.0 35.0 37.0 33.0 37.0 6 35.32397063750245 37.0 35.0 37.0 33.0 37.0 7 35.270502092872 37.0 35.0 37.0 32.0 37.0 8 35.227285225990336 37.0 35.0 37.0 32.0 37.0 9 37.04647864956305 39.0 37.0 39.0 33.0 39.0 10 36.820779842435556 39.0 37.0 39.0 33.0 39.0 11 36.93782354779823 39.0 37.0 39.0 33.0 39.0 12 36.82397709092195 39.0 37.0 39.0 33.0 39.0 13 36.95912628556325 39.0 37.0 39.0 33.0 39.0 14 37.967752543348745 40.0 37.0 41.0 33.0 41.0 15 37.97732577029979 40.0 37.0 41.0 33.0 41.0 16 37.9216366881949 39.0 37.0 41.0 33.0 41.0 17 37.85401607518739 39.0 37.0 41.0 33.0 41.0 18 37.892341811255996 39.0 37.0 41.0 33.0 41.0 19 37.93267259670449 40.0 37.0 41.0 33.0 41.0 20 37.81284971220555 39.0 37.0 41.0 33.0 41.0 21 37.790396301685576 39.0 37.0 41.0 33.0 41.0 22 37.68857481000291 39.0 37.0 41.0 32.0 41.0 23 37.61241127249648 39.0 37.0 40.0 32.0 41.0 24 37.51547445820737 39.0 36.0 41.0 32.0 41.0 25 37.48225253521182 39.0 36.0 40.0 32.0 41.0 26 37.31648691555168 39.0 36.0 40.0 32.0 41.0 27 37.10990173406188 39.0 36.0 40.0 31.0 41.0 28 36.982297428564856 39.0 36.0 40.0 31.0 41.0 29 36.875153829880006 39.0 36.0 40.0 31.0 41.0 30 36.78916257622751 39.0 35.0 40.0 30.0 41.0 31 36.71587417739945 39.0 35.0 40.0 30.0 41.0 32 36.58318205208639 38.0 35.0 40.0 30.0 41.0 33 36.51858051707042 38.0 35.0 40.0 30.0 41.0 34 36.48029406268571 38.0 35.0 40.0 30.0 41.0 35 36.3457938575792 38.0 35.0 40.0 30.0 41.0 36 36.239060471907706 38.0 35.0 40.0 30.0 41.0 37 36.07613828499535 38.0 35.0 40.0 30.0 41.0 38 35.987665831837354 38.0 35.0 40.0 29.0 41.0 39 35.847681903657744 38.0 35.0 40.0 28.0 41.0 40 35.73749818322212 38.0 35.0 40.0 28.0 41.0 41 35.643311367389806 38.0 35.0 40.0 27.0 41.0 42 35.532695829014685 38.0 34.0 40.0 27.0 41.0 43 34.21594263976283 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 14.0 11 20.0 12 37.0 13 18.0 14 12.0 15 11.0 16 17.0 17 43.0 18 108.0 19 267.0 20 629.0 21 1289.0 22 2512.0 23 4421.0 24 7649.0 25 12514.0 26 19216.0 27 29155.0 28 41978.0 29 58393.0 30 78090.0 31 102478.0 32 132386.0 33 171861.0 34 225923.0 35 299789.0 36 412828.0 37 580770.0 38 834964.0 39 546604.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.361002603253304 18.46472027793475 13.146316977375433 25.027960141436505 2 18.149484764598895 21.473781440077754 35.84967124036406 24.527062554959283 3 20.564578807756 23.26056494917792 29.77725601725252 26.397600225813566 4 15.101787260500977 15.670052934874896 33.509773563538964 35.718386241085156 5 15.74143336619901 35.49097334962214 33.29537974445581 15.472213539723043 6 34.96925647067538 33.7017768227964 15.032735671865504 16.29623103466272 7 28.629389096863584 30.295241136228316 21.784836259912314 19.29053350699579 8 26.424816821090445 34.725766147157046 19.805319974567915 19.04409705718459 9 26.472824650491216 15.143369728748748 20.094208701341916 38.289596919418116 10 17.863373814043875 26.54347556482853 32.324869626896955 23.268280994230643 11 34.545799918181864 22.20422435228712 21.40745151096997 21.842524218561042 12 21.487950904629123 25.428464967191378 30.40837238587408 22.67521174230542 13 30.93519588372846 19.680123636294255 25.016961269943174 24.367719210034114 14 22.01396071045976 21.075493223628943 26.917324962219435 29.99322110369186 15 25.152146379266902 27.24036069564495 23.755065232847794 23.85242769224035 16 23.61294971214943 26.025714912617893 25.898330023383824 24.46300535184885 17 23.493056401202917 26.382925711040567 26.51572586098436 23.60829202677215 18 23.64690031038142 24.877567408772496 27.570130432025568 23.905401848820514 19 24.620019854085378 25.103689616335796 27.979838395152417 22.29645213442641 20 24.02338719226308 25.096310271430823 27.6192044785609 23.261098057745198 21 23.30456043515127 25.87725820580348 27.936095434289882 22.882085924755373 22 23.809582598438496 25.525995776657812 27.18634838027588 23.478073244627808 23 23.239184489795463 25.51227524563679 27.50966469715786 23.738875567409895 24 23.22933601047362 25.65980602704488 27.52206648593351 23.588791476547993 25 23.686602869470892 25.3154459509282 27.313789386201243 23.684161793399667 26 23.20436408284844 25.745524272994235 27.761432232641848 23.28867941151548 27 23.661687058537005 25.94600115263684 27.494036198632887 22.898275590193272 28 23.486771331778154 26.008487088391085 27.34358734927758 23.161154230553183 29 23.257450472811183 26.164996540405983 27.708373901024746 22.86917908575809 30 23.266260793344113 26.068672239802332 27.686460333075008 22.978606633778544 31 23.08960544915519 25.584862185823688 27.85068583014263 23.474846534878488 32 22.660733635951942 26.050714898588723 27.66841881682446 23.62013264863488 33 22.96598037823772 25.706270647435105 27.572739858170674 23.7550091161565 34 23.222293365716407 25.738341336508793 27.787358144019 23.252007153755805 35 22.924145384879132 25.763874431046897 27.843923768841883 23.46805641523209 36 22.67697941808113 25.47838076409609 28.073946086450007 23.770693731372766 37 22.45876966399009 25.007786190916843 28.345943689144953 24.187500455948115 38 22.422798864871567 24.964969155460633 28.68253160351762 23.92970037615018 39 21.99325365137281 24.92930699814422 29.144119447744416 23.93331990273855 40 22.290335415075525 24.901445060917474 29.196139620572602 23.612079903434395 41 21.807675753268377 24.903128561656253 29.395522224735004 23.89367346034037 42 21.38918552795425 25.250266413991913 29.26622936799699 24.094318690056852 43 21.24923049987065 24.92930699814422 29.13197018407958 24.689492317905547 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3232.0 1 2805.5 2 2379.0 3 5137.5 4 7896.0 5 7896.0 6 9630.0 7 11364.0 8 10689.0 9 10014.0 10 14107.5 11 18201.0 12 18201.0 13 28000.5 14 37800.0 15 47411.0 16 57022.0 17 50965.5 18 44909.0 19 44909.0 20 46372.0 21 47835.0 22 38218.5 23 28602.0 24 31860.0 25 35118.0 26 35118.0 27 40525.0 28 45932.0 29 52111.5 30 58291.0 31 66215.0 32 74139.0 33 74139.0 34 83921.5 35 93704.0 36 107125.0 37 120546.0 38 136319.0 39 152092.0 40 152092.0 41 170384.0 42 188676.0 43 207869.0 44 227062.0 45 246157.0 46 265252.0 47 265252.0 48 282541.0 49 299830.0 50 306667.0 51 313504.0 52 311750.0 53 309996.0 54 309996.0 55 291236.0 56 272476.0 57 250694.5 58 228913.0 59 209310.5 60 189708.0 61 189708.0 62 166363.5 63 143019.0 64 121102.5 65 99186.0 66 82399.0 67 65612.0 68 65612.0 69 53710.0 70 41808.0 71 34524.0 72 27240.0 73 22155.0 74 17070.0 75 17070.0 76 13902.0 77 10734.0 78 8737.0 79 6740.0 80 5373.0 81 4006.0 82 4006.0 83 3148.0 84 2290.0 85 1747.0 86 1204.0 87 823.0 88 442.0 89 442.0 90 279.0 91 116.0 92 72.0 93 28.0 94 18.0 95 8.0 96 8.0 97 6.5 98 5.0 99 3.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3564002.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.03168372151366 #Duplication Level Percentage of deduplicated Percentage of total 1 82.68904861384921 47.98584716391765 2 9.057504402222392 10.512444615519751 3 2.9203093535414952 5.084114063210943 4 1.4553138891519375 3.3781726132316496 5 0.8606234128335855 2.497171284844416 6 0.5881444457083981 2.0478607473548833 7 0.41590011615734435 1.689476880040866 8 0.2958320623833053 1.3734106143128857 9 0.23197335717014136 1.2115624045603832 >10 1.3818492634302066 14.503687868981356 >50 0.07138089223208235 2.80905863649099 >100 0.029462788910267792 3.1246435118719553 >500 0.0016427578598009961 0.6294435781481705 >1k 8.213789213013711E-4 1.0457079625022312 >5k 0.0 0.0 >10k+ 1.932656285414991E-4 2.10739805501187 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 24039 0.6744945709907009 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 20602 0.5780580370044686 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 17968 0.5041523545721915 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12551 0.3521602962063433 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4359 0.1223063286720939 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4261 0.11955661079875939 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4068 0.11414135008902912 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4025 0.11293484122623948 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 2.805834564627068E-5 0.0 5 2.805834564627068E-5 0.0 0.0 5.611669129254136E-5 0.0 6 2.805834564627068E-5 0.0 0.0 5.611669129254136E-5 2.805834564627068E-5 7 2.805834564627068E-5 0.0 0.0 5.611669129254136E-5 5.611669129254136E-5 8 8.417503693881205E-5 0.0 0.0 5.611669129254136E-5 8.417503693881205E-5 9 1.1223338258508272E-4 0.0 0.0 8.417503693881205E-5 1.9640841952389476E-4 10 1.402917282313534E-4 0.0 0.0 8.417503693881205E-5 1.9640841952389476E-4 11 1.9640841952389476E-4 0.0 0.0 1.683500738776241E-4 1.9640841952389476E-4 12 1.9640841952389476E-4 0.0 0.0 3.928168390477895E-4 1.9640841952389476E-4 13 1.9640841952389476E-4 0.0 2.805834564627068E-5 4.489335303403309E-4 1.9640841952389476E-4 14 1.9640841952389476E-4 0.0 2.805834564627068E-5 6.17283604217955E-4 2.2446676517016544E-4 15 2.2446676517016544E-4 0.0 2.805834564627068E-5 7.014586411567671E-4 3.367001477552482E-4 16 2.2446676517016544E-4 0.0 2.805834564627068E-5 0.001571267356191158 4.208751846940602E-4 17 2.2446676517016544E-4 0.0 2.805834564627068E-5 0.00246913441687182 4.208751846940602E-4 18 2.2446676517016544E-4 0.0 2.805834564627068E-5 0.0028619512559196095 5.050502216328723E-4 19 2.2446676517016544E-4 0.0 5.611669129254136E-5 0.00370370162530773 5.050502216328723E-4 20 2.5252511081643613E-4 0.0 5.611669129254136E-5 0.005050502216328722 5.33108567279143E-4 21 3.086418021089775E-4 0.0 5.611669129254136E-5 0.008810320532928994 5.33108567279143E-4 22 3.086418021089775E-4 0.0 5.611669129254136E-5 0.013720531021026362 5.33108567279143E-4 23 3.086418021089775E-4 0.0 5.611669129254136E-5 0.01801345790490578 7.295169868030378E-4 24 3.086418021089775E-4 0.0 5.611669129254136E-5 0.024747460860010742 7.295169868030378E-4 25 3.086418021089775E-4 0.0 5.611669129254136E-5 0.02962961300246184 7.295169868030378E-4 26 3.086418021089775E-4 0.0 5.611669129254136E-5 0.039730617435119284 7.575753324493083E-4 27 3.086418021089775E-4 0.0 5.611669129254136E-5 0.07146460636105142 7.575753324493083E-4 28 3.086418021089775E-4 0.0 5.611669129254136E-5 0.16554423931299703 7.575753324493083E-4 29 3.086418021089775E-4 0.0 5.611669129254136E-5 0.31921979841762155 7.575753324493083E-4 30 3.086418021089775E-4 0.0 5.611669129254136E-5 0.5008134114402853 7.575753324493083E-4 31 3.086418021089775E-4 0.0 5.611669129254136E-5 0.918826644878426 7.85633678095579E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 3540 0.0 15.1031065 37 TCGTTAC 330 0.0 14.575757 23 GTACTAA 165 1.6483682E-8 14.575757 1 CGTACGA 80 0.0063020443 13.875001 10 CGTATAC 95 0.0012459721 13.631579 3 GTCCTAC 290 0.0 13.396551 1 GTCTTAA 430 0.0 12.906978 1 CGTTACA 245 1.1459633E-10 12.836734 24 CGTTACG 205 2.0696461E-8 12.634146 24 TATACTG 500 0.0 12.580001 5 TCTTATA 5245 0.0 12.345091 37 ATACCCG 500 0.0 12.210001 5 GTCTTAG 470 0.0 12.2021265 1 ACCCGTT 535 0.0 12.102803 7 ATACCGT 220 5.5342753E-8 11.772727 6 TACCCGT 535 0.0 11.7570095 6 ACCGTGC 425 0.0 11.75294 8 CTCTTAT 7735 0.0 11.623788 37 GTCTAGA 385 0.0 11.532467 1 GGCTAGT 305 3.092282E-11 11.52459 1 >>END_MODULE