SRR2727071.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2727071.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4405855
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	33163	0.7527029373413332	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	28332	0.6430533914529643	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	24876	0.5646123170190577	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16774	0.38072065467429134	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6046	0.13722648611903934	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5861	0.13302752814152985	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5203	0.11809285598368535	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5160	0.11711688196729124	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	4436	0.10068420317963256	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTATAC	4600	0.0	15.363043	37
AAACCGT	105	1.6573122E-4	14.095238	6
CGGACTA	80	0.006302357	13.875	29
ATACCCG	585	0.0	13.282051	5
TAAGGCG	330	0.0	12.893938	5
TATACAC	1910	0.0	12.688481	37
TCGTTAC	500	0.0	12.58	23
TCTTATA	6825	0.0	12.550183	37
CGCGTAT	120	5.1265553E-4	12.333333	7
TATACTG	585	0.0	12.333333	5
TACCCGT	620	0.0	11.935483	6
TAGAGTG	460	0.0	11.663044	5
ACCGTGC	445	0.0	11.6404505	8
CGGTTAA	175	7.3452557E-6	11.6285715	21
GTAAGAG	1385	0.0	11.620938	3
ACCCGTT	680	0.0	11.426471	7
ACTAGAC	390	0.0	11.384616	3
AATACCG	185	1.361654E-5	11.000001	5
TAGGACT	650	0.0	10.815385	4
AACCGTC	240	1.845874E-7	10.791666	7