##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727071.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4405855 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.61878818072769 31.0 31.0 34.0 30.0 34.0 2 31.844746592886057 31.0 31.0 34.0 30.0 34.0 3 31.95148115405523 33.0 31.0 34.0 30.0 34.0 4 35.6851097006143 37.0 35.0 37.0 33.0 37.0 5 35.29546069945561 37.0 35.0 37.0 33.0 37.0 6 35.328487206228985 37.0 35.0 37.0 33.0 37.0 7 35.266486527586586 37.0 35.0 37.0 32.0 37.0 8 35.227073746185475 37.0 35.0 37.0 32.0 37.0 9 37.05292230452432 39.0 37.0 39.0 33.0 39.0 10 36.829899758389686 39.0 37.0 39.0 33.0 39.0 11 36.94880743919171 39.0 37.0 39.0 33.0 39.0 12 36.83409077239265 39.0 37.0 39.0 33.0 39.0 13 36.967934033235316 39.0 37.0 39.0 33.0 39.0 14 37.96765871777442 40.0 37.0 41.0 33.0 41.0 15 37.97914547800597 40.0 37.0 41.0 33.0 41.0 16 37.91901639976803 39.0 37.0 41.0 33.0 41.0 17 37.85173388593133 39.0 37.0 41.0 33.0 41.0 18 37.896763511282145 39.0 37.0 41.0 33.0 41.0 19 37.9417227757155 40.0 37.0 41.0 33.0 41.0 20 37.82261467978406 39.0 37.0 41.0 33.0 41.0 21 37.80048458244767 39.0 37.0 41.0 33.0 41.0 22 37.69721563691951 39.0 37.0 41.0 32.0 41.0 23 37.62320457663723 39.0 37.0 40.0 32.0 41.0 24 37.52133740216144 39.0 36.0 41.0 32.0 41.0 25 37.491491435828 39.0 36.0 40.0 32.0 41.0 26 37.32672500570264 39.0 36.0 40.0 32.0 41.0 27 37.120101092750446 39.0 36.0 40.0 31.0 41.0 28 36.99068534938168 39.0 36.0 40.0 31.0 41.0 29 36.87482679298343 39.0 36.0 40.0 31.0 41.0 30 36.779978006539025 39.0 35.0 40.0 31.0 41.0 31 36.705425167192296 39.0 35.0 40.0 30.0 41.0 32 36.564854948698944 38.0 35.0 40.0 30.0 41.0 33 36.49570128839919 38.0 35.0 40.0 30.0 41.0 34 36.445117009070884 38.0 35.0 40.0 30.0 41.0 35 36.31477976465408 38.0 35.0 40.0 30.0 41.0 36 36.1917264639894 38.0 35.0 40.0 30.0 41.0 37 36.0221936491328 38.0 35.0 40.0 29.0 41.0 38 35.92007703385608 38.0 35.0 40.0 29.0 41.0 39 35.78087658354621 38.0 35.0 40.0 28.0 41.0 40 35.66166930141823 38.0 35.0 40.0 27.0 41.0 41 35.55817520095418 38.0 34.0 40.0 27.0 41.0 42 35.42930736485881 38.0 34.0 40.0 27.0 41.0 43 34.10965817077503 37.0 33.0 40.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 18.0 11 22.0 12 20.0 13 24.0 14 12.0 15 12.0 16 26.0 17 52.0 18 131.0 19 345.0 20 787.0 21 1634.0 22 2988.0 23 5558.0 24 9438.0 25 15397.0 26 23809.0 27 35994.0 28 51965.0 29 72746.0 30 97298.0 31 126801.0 32 164270.0 33 214431.0 34 280389.0 35 374591.0 36 513957.0 37 721684.0 38 1025830.0 39 665621.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.76462684314395 18.358389007354987 13.091193423296954 24.78579072620411 2 18.070976008061997 21.656069026329735 35.79557202858469 24.477382937023574 3 20.672378006085086 23.565528143799558 29.740583836735436 26.021510013379924 4 15.056351150911684 15.628498895220112 33.423274256642586 35.89187569722562 5 15.758099165769188 35.55321271353687 33.21160138043581 15.477086740258134 6 35.0010837850996 33.58369714845359 14.929837681902832 16.485381384543977 7 28.46353318481884 30.346345941934082 21.95403616324187 19.23608471000521 8 26.56882716294567 34.55388341195977 19.938831395949254 18.93845802914531 9 26.40266191238704 15.188743161089052 20.180123948700082 38.228470977823825 10 17.91280012619571 26.50495760754723 32.30623794927432 23.276004316982743 11 34.227976181694586 22.29233599380824 21.40758150234177 22.072106322155406 12 21.455131864303294 25.65141158753522 30.433525388375244 22.45993115978624 13 31.038447701978388 19.602755878257454 25.125520472189848 24.233275947574306 14 21.972080334010087 21.10804826758938 27.203550729654065 29.716320668746476 15 25.239368976055726 27.142177851971976 24.048567190704187 23.569885981268108 16 23.45989597932751 25.874977728499914 26.2602151001338 24.404911192038774 17 23.358508166973266 26.448714267718753 26.804717813001112 23.388059752306873 18 23.4504313010755 24.79900042103065 27.89326929733275 23.857298980561094 19 24.377152675246915 25.1865528938197 28.277303724248753 22.158990706684627 20 23.733668039461126 25.200398106610404 27.947901145180676 23.11803270874779 21 23.021070825072545 26.03049805315881 28.215159146181616 22.733271975587034 22 23.481889440301597 25.733870043385448 27.447181080630205 23.337059435682743 23 23.044267230764518 25.599616873455886 27.73341383227546 23.622702063504132 24 22.971023785394664 25.806432576650845 27.831283598756656 23.39126003919784 25 23.412254829085388 25.411163100011237 27.559576972006568 23.617005098896808 26 22.921544172470494 25.83446345828449 28.14112130335656 23.102871065888458 27 23.509035136199444 26.035627591012418 27.864217047542418 22.591120225245724 28 23.30941440424163 26.15226783450658 27.677942192832038 22.860375568419748 29 23.02447538559485 26.272698488715584 28.085626966842987 22.617199158846578 30 22.912737709252802 26.27555831955432 28.019306127868482 22.792397843324395 31 22.790854442554284 25.703251695754854 28.179819807960087 23.326074053730775 32 22.343404401642815 26.16699823303309 28.0086385048986 23.480958860425503 33 22.775170767081534 25.87981220444159 27.841474583253422 23.50354244522346 34 23.025110903559014 25.902214212678352 28.02656919031607 23.046105693446563 35 22.673624075236248 25.99543107977907 28.14089433265507 23.190050512329616 36 22.451238181919287 25.695784359675933 28.281956623629238 23.571020834775545 37 22.12875820924656 25.20645822434011 28.55554710720167 24.109236459211665 38 22.147505989189387 25.201691839608888 28.932000712688005 23.718801458513727 39 21.768828070828476 25.051391841084193 29.372505450133968 23.80727463795336 40 22.02902728301317 25.202803996046168 29.42577547377297 23.34239324716769 41 21.6199806847933 25.096082372206986 29.57462285980814 23.709314083191572 42 21.173211555986295 25.448862933528225 29.492119009817618 23.88580650066786 43 21.05005725335945 25.117009070884084 29.34651730481371 24.486416370942756 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4106.0 1 3489.5 2 2873.0 3 6567.5 4 10262.0 5 10262.0 6 12703.0 7 15144.0 8 14237.5 9 13331.0 10 18526.0 11 23721.0 12 23721.0 13 37027.0 14 50333.0 15 64380.0 16 78427.0 17 69995.5 18 61564.0 19 61564.0 20 63320.5 21 65077.0 22 51336.5 23 37596.0 24 41915.5 25 46235.0 26 46235.0 27 52705.5 28 59176.0 29 66454.5 30 73733.0 31 83266.5 32 92800.0 33 92800.0 34 104641.0 35 116482.0 36 132723.5 37 148965.0 38 167716.5 39 186468.0 40 186468.0 41 207707.0 42 228946.0 43 252247.5 44 275549.0 45 300088.5 46 324628.0 47 324628.0 48 346413.5 49 368199.0 50 375539.5 51 382880.0 52 384170.0 53 385460.0 54 385460.0 55 360736.5 56 336013.0 57 306998.5 58 277984.0 59 254039.0 60 230094.0 61 230094.0 62 201586.5 63 173079.0 64 146910.5 65 120742.0 66 100365.0 67 79988.0 68 79988.0 69 65740.0 70 51492.0 71 42321.5 72 33151.0 73 27025.5 74 20900.0 75 20900.0 76 16891.5 77 12883.0 78 10478.0 79 8073.0 80 6317.5 81 4562.0 82 4562.0 83 3668.5 84 2775.0 85 2096.5 86 1418.0 87 987.5 88 557.0 89 557.0 90 348.5 91 140.0 92 84.5 93 29.0 94 20.5 95 12.0 96 12.0 97 9.5 98 7.0 99 4.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4405855.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.15547855662053 #Duplication Level Percentage of deduplicated Percentage of total 1 82.17622556085306 45.32469046785643 2 9.091148682103668 10.028533123816356 3 3.0907873055047452 5.114215588555257 4 1.4948973443647857 3.298071136858437 5 0.90560682488622 2.4974588905370556 6 0.5897146149867565 1.9515595080856663 7 0.4390410065359114 1.6950861775027988 8 0.31227517498757784 1.3778949374233818 9 0.24857582819845292 1.2339286885704561 >10 1.5191794085329853 15.43006587183953 >50 0.09262792647995521 3.4502576037682084 >100 0.035560067072035795 3.4886462961463867 >500 0.0029205487494245457 1.1026557488553845 >1k 0.0011106309171589914 1.1615306714622016 >5k 1.6453791365317674E-4 0.5052599432272558 >10k+ 1.6453791365317674E-4 2.340145345495074 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 33163 0.7527029373413332 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 28332 0.6430533914529643 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 24876 0.5646123170190577 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16774 0.38072065467429134 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6046 0.13722648611903934 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5861 0.13302752814152985 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5203 0.11809285598368535 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5160 0.11711688196729124 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 4436 0.10068420317963256 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.2697070148699854E-5 2 0.0 0.0 0.0 0.0 2.2697070148699854E-5 3 0.0 0.0 0.0 0.0 2.2697070148699854E-5 4 0.0 0.0 0.0 2.2697070148699854E-5 2.2697070148699854E-5 5 0.0 0.0 0.0 4.539414029739971E-5 2.2697070148699854E-5 6 0.0 0.0 0.0 4.539414029739971E-5 4.539414029739971E-5 7 0.0 0.0 0.0 4.539414029739971E-5 4.539414029739971E-5 8 0.0 0.0 0.0 4.539414029739971E-5 4.539414029739971E-5 9 0.0 0.0 0.0 4.539414029739971E-5 1.5887949104089898E-4 10 2.2697070148699854E-5 0.0 0.0 1.1348535074349927E-4 1.5887949104089898E-4 11 4.539414029739971E-5 0.0 0.0 2.0427363133829868E-4 1.5887949104089898E-4 12 4.539414029739971E-5 0.0 0.0 2.950619119330981E-4 1.5887949104089898E-4 13 4.539414029739971E-5 0.0 0.0 3.858501925278975E-4 1.5887949104089898E-4 14 1.1348535074349927E-4 0.0 0.0 6.128208940148961E-4 2.2697070148699854E-4 15 1.5887949104089898E-4 0.0 0.0 7.943974552044949E-4 2.496677716356984E-4 16 1.5887949104089898E-4 0.0 0.0 0.0016114919805576898 3.1775898208179795E-4 17 1.8157656118959883E-4 0.0 0.0 0.002610163067100483 3.1775898208179795E-4 18 2.0427363133829868E-4 0.0 0.0 0.002996013259628381 3.1775898208179795E-4 19 2.0427363133829868E-4 0.0 0.0 0.004584808170037371 3.1775898208179795E-4 20 2.2697070148699854E-4 0.0 0.0 0.006377876711784659 3.1775898208179795E-4 21 2.7236484178439825E-4 0.0 0.0 0.011620899916134325 3.1775898208179795E-4 22 2.7236484178439825E-4 0.0 0.0 0.01740865280405279 3.1775898208179795E-4 23 2.7236484178439825E-4 0.0 0.0 0.022515493587510257 4.312443328252972E-4 24 2.7236484178439825E-4 2.2697070148699854E-5 0.0 0.030822621261934403 4.312443328252972E-4 25 2.7236484178439825E-4 2.2697070148699854E-5 0.0 0.03735937746475996 4.312443328252972E-4 26 2.7236484178439825E-4 2.2697070148699854E-5 0.0 0.04839015355702809 4.539414029739971E-4 27 2.7236484178439825E-4 2.2697070148699854E-5 0.0 0.08227687928903697 4.7663847312269693E-4 28 2.7236484178439825E-4 2.2697070148699854E-5 0.0 0.17490362256588107 4.7663847312269693E-4 29 2.7236484178439825E-4 2.2697070148699854E-5 0.0 0.3272236603338058 4.7663847312269693E-4 30 2.7236484178439825E-4 2.2697070148699854E-5 0.0 0.5084597654711741 4.7663847312269693E-4 31 2.7236484178439825E-4 2.2697070148699854E-5 0.0 0.9365265084756534 4.7663847312269693E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 4600 0.0 15.363043 37 AAACCGT 105 1.6573122E-4 14.095238 6 CGGACTA 80 0.006302357 13.875 29 ATACCCG 585 0.0 13.282051 5 TAAGGCG 330 0.0 12.893938 5 TATACAC 1910 0.0 12.688481 37 TCGTTAC 500 0.0 12.58 23 TCTTATA 6825 0.0 12.550183 37 CGCGTAT 120 5.1265553E-4 12.333333 7 TATACTG 585 0.0 12.333333 5 TACCCGT 620 0.0 11.935483 6 TAGAGTG 460 0.0 11.663044 5 ACCGTGC 445 0.0 11.6404505 8 CGGTTAA 175 7.3452557E-6 11.6285715 21 GTAAGAG 1385 0.0 11.620938 3 ACCCGTT 680 0.0 11.426471 7 ACTAGAC 390 0.0 11.384616 3 AATACCG 185 1.361654E-5 11.000001 5 TAGGACT 650 0.0 10.815385 4 AACCGTC 240 1.845874E-7 10.791666 7 >>END_MODULE