##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727070.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6063138 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.958748753533236 33.0 31.0 34.0 30.0 34.0 2 32.1347882894963 33.0 31.0 34.0 30.0 34.0 3 32.22061199992479 34.0 31.0 34.0 30.0 34.0 4 35.85219056534751 37.0 35.0 37.0 35.0 37.0 5 35.57851116039252 37.0 35.0 37.0 33.0 37.0 6 35.638492641928984 37.0 35.0 37.0 33.0 37.0 7 35.58437940881438 37.0 35.0 37.0 33.0 37.0 8 35.577769960043796 37.0 35.0 37.0 33.0 37.0 9 37.378424505594296 39.0 37.0 39.0 34.0 39.0 10 37.2194241661661 39.0 37.0 39.0 34.0 39.0 11 37.307803154076325 39.0 37.0 39.0 34.0 39.0 12 37.22456886186658 39.0 37.0 39.0 34.0 39.0 13 37.30830718350795 39.0 37.0 39.0 34.0 39.0 14 38.38157419474866 40.0 38.0 41.0 34.0 41.0 15 38.34291104705187 40.0 38.0 41.0 34.0 41.0 16 38.28465573437385 40.0 38.0 41.0 34.0 41.0 17 38.30607269700937 40.0 38.0 41.0 34.0 41.0 18 38.36348867533611 40.0 38.0 41.0 34.0 41.0 19 38.42299367093409 40.0 38.0 41.0 34.0 41.0 20 38.34955133793755 40.0 38.0 41.0 34.0 41.0 21 38.262655740311374 40.0 38.0 41.0 34.0 41.0 22 38.17592226995328 40.0 38.0 41.0 34.0 41.0 23 38.091225368777685 40.0 37.0 41.0 33.0 41.0 24 37.99715691775447 40.0 37.0 41.0 33.0 41.0 25 37.95400352094905 40.0 37.0 41.0 33.0 41.0 26 37.733557936500866 39.0 37.0 41.0 33.0 41.0 27 37.55559019108587 39.0 36.0 41.0 33.0 41.0 28 37.425169112100036 39.0 36.0 41.0 32.0 41.0 29 37.27116882380048 39.0 36.0 41.0 32.0 41.0 30 37.12702333346198 39.0 36.0 40.0 32.0 41.0 31 36.97441984662068 39.0 35.0 40.0 31.0 41.0 32 36.79610046810744 39.0 35.0 40.0 31.0 41.0 33 36.62489093931228 39.0 35.0 40.0 31.0 41.0 34 36.49876911922506 39.0 35.0 40.0 30.0 41.0 35 36.33349298663497 39.0 35.0 40.0 30.0 41.0 36 36.11117840299858 38.0 35.0 40.0 30.0 41.0 37 35.94850240914853 38.0 35.0 40.0 29.0 41.0 38 35.80460398559294 38.0 35.0 40.0 28.0 41.0 39 35.596176435370595 38.0 35.0 40.0 27.0 41.0 40 35.385594720093785 38.0 35.0 40.0 25.0 41.0 41 35.20347664856053 38.0 35.0 40.0 24.0 41.0 42 34.90279868279429 38.0 34.0 40.0 23.0 41.0 43 33.67544561908372 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 25.0 10 48.0 11 35.0 12 21.0 13 15.0 14 16.0 15 22.0 16 44.0 17 108.0 18 260.0 19 555.0 20 1158.0 21 2517.0 22 4578.0 23 8062.0 24 13638.0 25 22287.0 26 33886.0 27 50524.0 28 71562.0 29 97105.0 30 124295.0 31 157056.0 32 197843.0 33 253977.0 34 331929.0 35 443967.0 36 632163.0 37 962119.0 38 1419354.0 39 1233965.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.72770733570636 17.964707384196103 13.569128725092519 22.738456555005016 2 17.91583830023331 23.092745043903008 35.73190978005118 23.25950687581249 3 21.57391106717347 24.813223779501637 30.009246037283006 23.60361911604189 4 14.97514983165483 15.975720823111727 33.000584845669025 36.048544499564414 5 15.774686309300565 36.05115041089284 32.57817981381918 15.595983465987414 6 34.25003686210012 33.251576988681435 14.67198998274491 17.826396166473533 7 27.42319241290566 30.910413056737283 22.50860857859412 19.157785951762932 8 26.982727425963255 34.05114645254652 20.129609453058794 18.83651666843143 9 26.156966903936542 15.470652325577944 20.77168621265094 37.60069455783457 10 18.652321619596982 27.160836517328157 31.164736807903765 23.022105055171103 11 32.49352068186474 23.280832466620417 21.204102562072645 23.0215442894422 12 21.487586131141992 27.214208220231832 30.404701327926233 20.89350432069994 13 31.384408535646063 19.734302600402632 25.89545215695239 22.985836706998917 14 21.451532193395565 22.32088400428953 29.045471173507842 27.182112628807065 15 25.107675266503914 27.407886807128584 25.615679537559593 21.86875838880791 16 21.964814259546788 26.035412685642317 28.081349954429534 23.918423100381354 17 22.252487078473226 27.192651725888478 28.292296827154516 22.26256436848378 18 22.546493251514317 24.598895819293574 29.612207408111114 23.242403521081 19 23.781431331432668 25.381691790620632 30.43328388699053 20.403592990956167 20 23.046300447062233 25.830172428864394 29.555438124614682 21.568088999458695 21 21.649713399233203 27.228210870344693 29.991680875480654 21.13039485494145 22 21.901480718400272 27.191761097966104 29.213008181571986 21.693750002061638 23 21.525041983210674 26.724131959391322 29.479371902800168 22.271454154597834 24 21.590668066601815 27.025444580017805 29.669191102033306 21.714696251347075 25 21.868923319904642 26.449554669545705 29.392090366407626 22.289431644142027 26 21.240832717315687 27.14424444899654 30.37920298037089 21.23571985331688 27 22.06151336156294 27.132435382470266 30.167266521065493 20.6387847349013 28 21.950630185227517 27.54098620219431 29.68774585041607 20.8206377621621 29 21.6739912566727 27.58657315733206 30.00964187191517 20.72979371408007 30 20.984166944575563 27.761152723226818 30.317601215740098 20.937079116457518 31 20.736456930388194 27.30978579079018 30.324495335583652 21.629261943237974 32 20.53192587732623 27.514019967878017 30.017970892300323 21.936083262495426 33 20.9875150458393 27.55046974025661 29.660334302138597 21.80168091176549 34 21.22506530446775 27.7760789874814 29.48714015745642 21.511715550594428 35 20.583912159017327 27.82221021523838 29.924471453560848 21.669406172183447 36 20.383999176663963 27.644117616983156 30.018795547784 21.95308765856888 37 20.030172494836833 26.923847024428603 30.089122167432116 22.956858313302455 38 20.112654536314363 27.0289411192686 30.467589555111562 22.390814789305473 39 19.597871597182845 26.830430051237496 30.85234081757664 22.71935753400302 40 19.949075874571882 27.0890420109191 30.85461686671159 22.10726524779743 41 19.794865299123984 26.913901679295442 30.988244041286872 22.302988980293705 42 19.116503698249982 27.365631460144897 30.817721780371816 22.70014306123331 43 19.225638604960004 26.80963223993912 30.567587279062426 23.397141876038447 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5735.0 1 5259.0 2 4783.0 3 12402.5 4 20022.0 5 20022.0 6 26615.5 7 33209.0 8 31898.0 9 30587.0 10 43724.0 11 56861.0 12 56861.0 13 88785.0 14 120709.0 15 157186.0 16 193663.0 17 169988.5 18 146314.0 19 146314.0 20 145830.5 21 145347.0 22 107587.5 23 69828.0 24 74204.0 25 78580.0 26 78580.0 27 86219.0 28 93858.0 29 102441.0 30 111024.0 31 119117.0 32 127210.0 33 127210.0 34 138098.0 35 148986.0 36 167354.0 37 185722.0 38 210403.0 39 235084.0 40 235084.0 41 265362.5 42 295641.0 43 331682.5 44 367724.0 45 409123.5 46 450523.0 47 450523.0 48 474279.5 49 498036.0 50 499714.5 51 501393.0 52 503408.0 53 505423.0 54 505423.0 55 465925.0 56 426427.0 57 380310.0 58 334193.0 59 303038.5 60 271884.0 61 271884.0 62 238373.5 63 204863.0 64 173870.0 65 142877.0 66 118540.0 67 94203.0 68 94203.0 69 77283.0 70 60363.0 71 49901.5 72 39440.0 73 32317.0 74 25194.0 75 25194.0 76 20359.5 77 15525.0 78 12729.0 79 9933.0 80 7814.5 81 5696.0 82 5696.0 83 4470.5 84 3245.0 85 2516.0 86 1787.0 87 1309.0 88 831.0 89 831.0 90 549.5 91 268.0 92 175.0 93 82.0 94 62.5 95 43.0 96 43.0 97 30.0 98 17.0 99 11.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 6063138.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.43350704821073 #Duplication Level Percentage of deduplicated Percentage of total 1 80.8432630452983 38.346794874595105 2 9.675968872647601 9.179302754379954 3 3.2853252448142993 4.675034944666912 4 1.5752270384926215 2.988741713314875 5 0.9669700443616298 2.2933390207318003 6 0.6339621080286555 1.8042627671685456 7 0.48776270713884307 1.6195407064847258 8 0.3498331337197022 1.3275049931192913 9 0.2669176121407112 1.1394754593091203 >10 1.7110891332097447 15.208717687606882 >50 0.13007945292365816 4.209807012283993 >100 0.06258429092688697 5.495040900872252 >500 0.006394921364255385 2.091795927048519 >1k 0.0041010721961577965 3.948840782240358 >5k 2.0852909471437994E-4 0.621105580853163 >10k+ 3.127936420715699E-4 5.050694875324506 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 83021 1.3692744582095937 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 64652 1.0663125266157556 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 59210 0.9765570237721786 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 40596 0.6695542803083157 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13564 0.22371253961232618 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12541 0.20684008841626236 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11401 0.18803794338839064 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11272 0.18591033224049988 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10116 0.16684429745785104 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 8111 0.13377561256233983 No Hit GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG 6703 0.11055331414195092 No Hit GTACGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAA 6226 0.10268610082765724 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.2986219347143346E-5 0.0 0.0 0.0 3.2986219347143346E-5 2 9.895865804143003E-5 0.0 0.0 0.0 3.2986219347143346E-5 3 9.895865804143003E-5 0.0 0.0 0.0 3.2986219347143346E-5 4 9.895865804143003E-5 0.0 0.0 0.0 4.9479329020715016E-5 5 1.3194487738857338E-4 0.0 0.0 0.0 4.9479329020715016E-5 6 1.9791731608286006E-4 0.0 0.0 0.0 8.246554836785836E-5 7 2.3090353543000342E-4 0.0 0.0 0.0 8.246554836785836E-5 8 2.8038286445071845E-4 0.0 0.0 3.2986219347143346E-5 1.3194487738857338E-4 9 3.298621934714334E-4 0.0 0.0 6.597243869428669E-5 1.4843798706214506E-4 10 4.947932902071502E-4 0.0 0.0 2.1441042575643174E-4 1.4843798706214506E-4 11 5.772588385750086E-4 0.0 0.0 5.442726192278652E-4 1.4843798706214506E-4 12 6.597243869428668E-4 0.0 0.0 0.001203997006170732 1.4843798706214506E-4 13 6.597243869428668E-4 0.0 0.0 0.0015008729802950221 1.649310967357167E-4 14 7.421899353107252E-4 1.6493109673571673E-5 0.0 0.0023420215736471776 1.814242064092884E-4 15 7.421899353107252E-4 1.6493109673571673E-5 0.0 0.0035625116894914812 2.3090353543000342E-4 16 7.421899353107252E-4 3.2986219347143346E-5 0.0 0.006877626733879387 2.6388975477714677E-4 17 7.421899353107252E-4 3.2986219347143346E-5 0.0 0.009796907146101572 2.6388975477714677E-4 18 8.57641703025727E-4 3.2986219347143346E-5 0.0 0.011924518293992319 3.298621934714334E-4 19 9.236141417200137E-4 3.2986219347143346E-5 0.0 0.016822971867043107 3.298621934714334E-4 20 9.56600361067157E-4 3.2986219347143346E-5 0.0 0.023205805310715342 3.463553031450051E-4 21 0.0010225727997614437 3.2986219347143346E-5 0.0 0.040391625590577025 3.628484128185768E-4 22 0.0011215314578028738 3.2986219347143346E-5 0.0 0.06165124395981091 3.628484128185768E-4 23 0.0011215314578028738 3.2986219347143346E-5 0.0 0.07817733985272972 4.947932902071502E-4 24 0.0011875038964971605 3.2986219347143346E-5 0.0 0.1054404501431437 5.112863998807219E-4 25 0.001203997006170732 3.2986219347143346E-5 0.0 0.12374780188080825 5.442726192278652E-4 26 0.0012369832255178753 3.2986219347143346E-5 0.0 0.15122532259697866 5.772588385750086E-4 27 0.0012699694448650187 3.2986219347143346E-5 0.0 0.19945117528250222 5.772588385750086E-4 28 0.001302955664212162 3.2986219347143346E-5 0.0 0.33358963625766064 5.772588385750086E-4 29 0.001302955664212162 3.2986219347143346E-5 0.0 0.5801946120969043 5.937519482485802E-4 30 0.001302955664212162 3.2986219347143346E-5 0.0 0.862721580805187 5.937519482485802E-4 31 0.001302955664212162 3.2986219347143346E-5 0.0 1.434339775871834 5.937519482485802E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACCCG 2560 0.0 15.392579 5 CTCCATA 2765 0.0 14.987341 1 TCCATAC 2725 0.0 14.86789 2 ACCCGTT 2660 0.0 14.81391 7 TATACCG 215 1.2732926E-11 14.627907 5 TACCCGT 2710 0.0 14.267528 6 CATACCC 2895 0.0 14.122625 4 TATACAC 4255 0.0 13.565217 37 CCATACC 2975 0.0 13.494118 3 CTTATAC 9105 0.0 13.389895 37 CCGTTTT 2865 0.0 13.301921 9 CCCGTTT 2900 0.0 13.268966 8 TCGTTAC 450 0.0 13.155556 23 TACACCG 395 0.0 12.177215 5 GTATTAG 485 0.0 11.824742 1 GTATTAC 400 0.0 11.562501 1 CGTTTTT 3265 0.0 11.502296 10 TAACGCT 195 1.9640738E-6 11.384616 4 TCTACAC 1220 0.0 11.069672 3 CTCGTTA 600 0.0 10.791667 22 >>END_MODULE