##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727069.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7773509 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.89727213282959 31.0 31.0 34.0 30.0 34.0 2 32.111845113963334 33.0 31.0 34.0 30.0 34.0 3 32.217313699643235 34.0 31.0 34.0 30.0 34.0 4 35.8504137578023 37.0 35.0 37.0 35.0 37.0 5 35.54926867647545 37.0 35.0 37.0 33.0 37.0 6 35.58120444705216 37.0 35.0 37.0 33.0 37.0 7 35.533986131617006 37.0 35.0 37.0 33.0 37.0 8 35.509086437026056 37.0 35.0 37.0 33.0 37.0 9 37.31460785598885 39.0 37.0 39.0 34.0 39.0 10 37.138117804970705 39.0 37.0 39.0 33.0 39.0 11 37.2298610575996 39.0 37.0 39.0 34.0 39.0 12 37.137231461364486 39.0 37.0 39.0 33.0 39.0 13 37.214583401138405 39.0 37.0 39.0 34.0 39.0 14 38.34892787800207 40.0 38.0 41.0 34.0 41.0 15 38.30550154376871 40.0 38.0 41.0 34.0 41.0 16 38.25071843359286 40.0 38.0 41.0 33.0 41.0 17 38.23374913439992 40.0 38.0 41.0 33.0 41.0 18 38.24746636300286 40.0 38.0 41.0 33.0 41.0 19 38.29716566868321 40.0 38.0 41.0 34.0 41.0 20 38.213259417336495 40.0 38.0 41.0 34.0 41.0 21 38.156349211147756 40.0 38.0 41.0 33.0 41.0 22 38.082445778347974 40.0 37.0 41.0 33.0 41.0 23 38.017884715898575 40.0 37.0 41.0 33.0 41.0 24 37.928031729300116 40.0 37.0 41.0 33.0 41.0 25 37.894464520463025 40.0 37.0 41.0 33.0 41.0 26 37.71712633252242 40.0 37.0 41.0 33.0 41.0 27 37.5617333176047 39.0 37.0 41.0 32.0 41.0 28 37.45805401395946 39.0 36.0 41.0 32.0 41.0 29 37.33531459216166 39.0 36.0 41.0 32.0 41.0 30 37.26375849053497 39.0 36.0 41.0 32.0 41.0 31 37.18278013185551 39.0 36.0 40.0 31.0 41.0 32 37.04891343150178 39.0 36.0 40.0 31.0 41.0 33 36.94978586890425 39.0 35.0 40.0 31.0 41.0 34 36.884401754728785 39.0 35.0 40.0 31.0 41.0 35 36.782100593181276 39.0 35.0 40.0 30.0 41.0 36 36.64158528664468 39.0 35.0 40.0 30.0 41.0 37 36.53465699981823 39.0 35.0 40.0 30.0 41.0 38 36.45953931487054 39.0 35.0 40.0 30.0 41.0 39 36.328795657147886 39.0 35.0 40.0 30.0 41.0 40 36.203948821568225 39.0 35.0 40.0 30.0 41.0 41 36.11505974972178 39.0 35.0 40.0 29.0 41.0 42 35.940388439763815 39.0 35.0 40.0 28.0 41.0 43 34.66135692388084 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 14.0 10 27.0 11 43.0 12 43.0 13 29.0 14 23.0 15 35.0 16 49.0 17 125.0 18 274.0 19 619.0 20 1326.0 21 2713.0 22 5019.0 23 9068.0 24 15123.0 25 24428.0 26 37463.0 27 55403.0 28 78690.0 29 109001.0 30 144727.0 31 188702.0 32 242587.0 33 315897.0 34 414770.0 35 557255.0 36 788365.0 37 1181666.0 38 1921829.0 39 1678194.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.4335253229912 18.43440330486528 13.147408718507947 24.984662653635574 2 18.274758542120427 21.438078993669397 35.792175708550666 24.49498675565951 3 20.630374262125383 23.152234081159488 29.799759670954263 26.41763198576087 4 15.214480358870105 15.69949941525764 33.438399569615214 35.64762065625704 5 15.821735074854871 35.47871366714826 33.197748918795874 15.501802339200996 6 35.10520152481975 33.63693281888527 14.87842877650235 16.37943687979264 7 28.649352563945058 30.254920911521427 21.65303983053213 19.44268669400138 8 26.3971264457274 34.73087893768438 19.721775584231008 19.150219032357203 9 26.30037477283425 15.272883841775961 20.07155327150197 38.35518811388782 10 17.898840793777946 26.608832639159484 32.372433092957124 23.119893474105453 11 34.49763806795618 22.272566996449093 21.246222265903338 21.983572669691384 12 21.41807515756398 25.632967042297118 30.138345501368814 22.810612298770092 13 31.06943080660227 19.720167558820606 24.797527088474457 24.412874546102667 14 22.07232280814237 21.21478215307913 26.68913099605339 30.023764042725105 15 25.277477648768397 27.33028288768946 23.56060821438555 23.83163124915659 16 23.644431362979063 25.97776628289747 25.889916638676304 24.48788571544717 17 23.430152328890337 26.562946026048213 26.49601357636558 23.510888068695877 18 23.548978974617512 25.0406348021209 27.500759309598795 23.9096269136628 19 24.473580721396218 25.344371505841185 27.800765394366945 22.38128237839565 20 23.873735786502596 25.336086958926785 27.547366318093925 23.242810936476694 21 23.282111077506954 26.023074006861 27.692706086787833 23.00210882884422 22 23.735831527306395 25.776531550937936 26.985162042007026 23.502474879748643 23 23.293495897412612 25.660818042405303 27.21682061473139 23.8288654454507 24 23.255816645996035 25.815883148781328 27.306162506533404 23.622137698689226 25 23.647068524652124 25.484436951188965 27.09126599068709 23.77722853347182 26 23.214098034748528 25.894136097353204 27.604702072127274 23.287063795770997 27 23.681441675824907 26.104311450594576 27.342246596742857 22.872000276837653 28 23.51396261328057 26.145824234589554 27.237622031440374 23.10259112068951 29 23.193348074852683 26.275752687750153 27.636721074099224 22.89417816329794 30 23.180689698821986 26.302214353903754 27.52929211248099 22.98780383479327 31 23.075177503492952 25.642718108385804 27.711076169076282 23.571028219044965 32 22.640483210349405 26.12652792966471 27.593111424969084 23.6398774350168 33 23.06321379443955 25.811908109966815 27.379411280028105 23.745466815565532 34 23.23031979508868 25.77411308072069 27.662693900528062 23.33287322366257 35 22.87808504499062 25.855453438080538 27.746993024643054 23.51946849228579 36 22.702951781492757 25.454141752456966 28.01162255038233 23.831283915667946 37 22.377899092932164 24.982372825451158 28.414465076196606 24.225263005420075 38 22.336630728799566 24.937283792943443 28.839395439048182 23.886690039208805 39 21.96901039157477 24.817402282547047 29.274848720185442 23.938738605692745 40 22.137145528486556 24.881723298963184 29.45467741788168 23.52645375466858 41 21.747218662768642 24.872332430566427 29.459089839607827 23.921359067057104 42 21.256848097815283 25.241547928998347 29.431894913867083 24.069709059319287 43 21.159105881269323 24.887177721155275 29.32119844461491 24.632517952960498 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 7778.0 1 6510.5 2 5243.0 3 10574.0 4 15905.0 5 15905.0 6 19675.5 7 23446.0 8 21760.0 9 20074.0 10 28346.5 11 36619.0 12 36619.0 13 58489.0 14 80359.0 15 101060.0 16 121761.0 17 107677.0 18 93593.0 19 93593.0 20 98789.5 21 103986.0 22 83050.5 23 62115.0 24 70645.5 25 79176.0 26 79176.0 27 92316.5 28 105457.0 29 118733.5 30 132010.0 31 149254.0 32 166498.0 33 166498.0 34 189235.0 35 211972.0 36 240269.5 37 268567.0 38 302643.0 39 336719.0 40 336719.0 41 373626.0 42 410533.0 43 450244.5 44 489956.0 45 529963.0 46 569970.0 47 569970.0 48 609632.0 49 649294.0 50 664904.0 51 680514.0 52 683690.0 53 686866.0 54 686866.0 55 639909.0 56 592952.0 57 544627.5 58 496303.0 59 452479.0 60 408655.0 61 408655.0 62 358821.0 63 308987.0 64 262048.5 65 215110.0 66 179888.0 67 144666.0 68 144666.0 69 118901.5 70 93137.0 71 77232.5 72 61328.0 73 50029.0 74 38730.0 75 38730.0 76 31200.5 77 23671.0 78 19042.0 79 14413.0 80 11235.0 81 8057.0 82 8057.0 83 6457.5 84 4858.0 85 3696.0 86 2534.0 87 1835.5 88 1137.0 89 1137.0 90 758.0 91 379.0 92 248.0 93 117.0 94 81.0 95 45.0 96 45.0 97 29.5 98 14.0 99 9.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 7773509.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.024736685058414 #Duplication Level Percentage of deduplicated Percentage of total 1 80.57317932435122 41.91798438227365 2 9.99920371268099 10.40411880424974 3 3.4059546402954157 5.315816799678655 4 1.629327605617732 3.3906135862383677 5 0.9446067475741625 2.4571458656737626 6 0.6188642248167957 1.931774900393795 7 0.4198538679391025 1.5289950848014568 8 0.3289856335621985 1.3692312767392394 9 0.25956934030008816 1.2153623922563768 >10 1.6337174261690217 15.967538769763895 >50 0.12887623550266206 4.588963935816527 >100 0.0536397423640962 4.882811351998695 >500 0.0025429116347762365 0.9155282978274295 >1k 0.0014070510363322843 1.3366201068988222 >5k 1.72795735275266E-4 0.7039154854939417 >10k+ 9.874042015729487E-5 2.07357895989553 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 52198 0.671485682977919 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 45192 0.5813590747756258 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 36664 0.47165314917626006 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27410 0.35260781199327096 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9470 0.12182400509216623 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9080 0.11680696581170744 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8744 0.11248459350854292 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8501 0.10935859211071859 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.859260984968307E-5 2 0.0 0.0 0.0 0.0 3.859260984968307E-5 3 0.0 0.0 0.0 0.0 3.859260984968307E-5 4 0.0 0.0 0.0 0.0 3.859260984968307E-5 5 0.0 0.0 0.0 0.0 3.859260984968307E-5 6 1.286420328322769E-5 0.0 0.0 0.0 6.432101641613845E-5 7 1.286420328322769E-5 0.0 0.0 0.0 6.432101641613845E-5 8 1.286420328322769E-5 0.0 0.0 1.286420328322769E-5 7.718521969936614E-5 9 3.859260984968307E-5 0.0 0.0 1.286420328322769E-5 1.0291362626582152E-4 10 6.432101641613845E-5 0.0 0.0 5.145681313291076E-5 1.0291362626582152E-4 11 6.432101641613845E-5 0.0 0.0 1.1577782954904922E-4 1.1577782954904922E-4 12 6.432101641613845E-5 0.0 0.0 1.415062361155046E-4 1.286420328322769E-4 13 7.718521969936614E-5 0.0 0.0 2.4441986238132613E-4 1.286420328322769E-4 14 1.0291362626582152E-4 0.0 0.0 3.6019769193037534E-4 1.8009884596518767E-4 15 1.0291362626582152E-4 0.0 0.0 4.7597552147942454E-4 2.4441986238132613E-4 16 1.1577782954904922E-4 0.0 0.0 9.13358433109166E-4 2.830124722310092E-4 17 1.1577782954904922E-4 0.0 0.0 0.0013893339545885907 2.830124722310092E-4 18 1.1577782954904922E-4 0.0 0.0 0.0018910378826344704 3.2160508208069227E-4 19 1.1577782954904922E-4 0.0 0.0 0.0028043963157436363 3.2160508208069227E-4 20 1.5437043939873227E-4 1.286420328322769E-5 0.0 0.004103680847349633 3.3446928536391994E-4 21 1.6723464268195997E-4 1.286420328322769E-5 0.0 0.007062447602492002 3.4733348864714766E-4 22 1.8009884596518767E-4 1.286420328322769E-5 0.0 0.010278498423298924 3.4733348864714766E-4 23 1.9296304924841537E-4 1.286420328322769E-5 0.0 0.013031437925909651 4.3738291162974147E-4 24 1.9296304924841537E-4 1.286420328322769E-5 0.0 0.018511588524564648 4.5024711491296914E-4 25 1.9296304924841537E-4 1.286420328322769E-5 0.0 0.023309936349208575 4.5024711491296914E-4 26 1.9296304924841537E-4 1.286420328322769E-5 0.0 0.0323791996638841 4.5024711491296914E-4 27 2.0582725253164304E-4 1.286420328322769E-5 0.0 0.06789726492887575 4.5024711491296914E-4 28 2.0582725253164304E-4 1.286420328322769E-5 0.0 0.16800649487895364 4.5024711491296914E-4 29 2.1869145581487074E-4 1.286420328322769E-5 0.0 0.32601750380683936 4.7597552147942454E-4 30 2.1869145581487074E-4 1.286420328322769E-5 0.0 0.5137962791321139 4.7597552147942454E-4 31 2.1869145581487074E-4 1.286420328322769E-5 0.0 0.9598110711649012 4.7597552147942454E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 8000 0.0 15.401251 37 CGTATAC 240 0.0 14.645834 3 ATACCCG 625 0.0 13.024 5 TAGATCG 260 2.3646862E-11 12.807693 5 TCTTATA 12215 0.0 12.616045 37 TATACAC 3380 0.0 12.096154 37 GTATTAC 670 0.0 11.320895 1 CTCTTAT 17820 0.0 11.253648 37 GTACCGT 405 0.0 10.962963 6 GTACTAG 540 0.0 10.962963 1 GTATTAG 760 0.0 10.953947 1 TAGACTG 1020 0.0 10.882353 5 ACCCGTT 845 0.0 10.727811 7 TATACTG 1135 0.0 10.594713 5 TTATACA 5080 0.0 10.561024 37 TACCCGT 760 0.0 10.467106 6 GGGTAAG 2240 0.0 10.075893 1 GGTATCA 37380 0.0 10.012172 1 TAGACAG 1250 0.0 9.916 5 TCTCTTA 24250 0.0 9.902267 37 >>END_MODULE