SRR2727068.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2727068.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7447406
Sequences flagged as poor quality	0
Sequence length	43
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	66338	0.8907531024896455	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	54489	0.7316507250981079	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	46736	0.6275473634712543	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35292	0.47388312118340264	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12943	0.17379205591853056	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	11835	0.15891439247437297	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11615	0.1559603437760745	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11545	0.15502041919025228	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11276	0.15140842328187828	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8466	0.11367716490815727	No Hit
GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG	8127	0.10912524441396106	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG	7607	0.10214294749071018	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATACAC	4500	0.0	14.635556	37
CTTATAC	9730	0.0	13.822714	37
TATACCG	335	0.0	13.253732	5
ATACCCG	1010	0.0	12.821782	5
ACCCGTT	1125	0.0	12.004445	7
TCTTATA	14120	0.0	11.595255	37
TCGTTAC	400	0.0	11.1	23
ATACCGA	320	7.4578566E-11	10.984376	6
TAGTACT	660	0.0	10.931818	4
TAGACAG	1395	0.0	10.874552	5
TACCCGT	1175	0.0	10.706383	6
CTCTTAT	19870	0.0	10.623301	37
GTATAGT	805	0.0	10.571429	1
CTAGACA	940	0.0	10.430851	4
TATACGA	160	4.8275915E-4	10.40625	5
TACACAG	1770	0.0	10.347459	5
CTATACT	1100	0.0	10.25909	4
TTATACA	6525	0.0	10.150191	36
GTCTAGA	830	0.0	10.030121	1
TACTTAC	1320	0.0	9.950758	31