##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727066.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1644769 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.31660737769255 33.0 31.0 34.0 31.0 34.0 2 32.4982578100633 34.0 31.0 34.0 31.0 34.0 3 32.61658445654071 34.0 31.0 34.0 31.0 34.0 4 36.13781023353432 37.0 35.0 37.0 35.0 37.0 5 35.93389466849144 37.0 35.0 37.0 35.0 37.0 6 35.9633754040841 37.0 35.0 37.0 35.0 37.0 7 35.919537637200115 37.0 35.0 37.0 35.0 37.0 8 35.91444330480451 37.0 35.0 37.0 35.0 37.0 9 37.73216178077286 39.0 37.0 39.0 35.0 39.0 10 37.59659927929089 39.0 37.0 39.0 35.0 39.0 11 37.65869675316108 39.0 37.0 39.0 35.0 39.0 12 37.583830920937835 39.0 37.0 39.0 35.0 39.0 13 37.61283742580265 39.0 37.0 39.0 35.0 39.0 14 38.91234331386353 40.0 38.0 41.0 36.0 41.0 15 38.82411694286553 40.0 38.0 41.0 35.0 41.0 16 38.7715059075165 40.0 38.0 41.0 35.0 41.0 17 38.7799295828168 40.0 38.0 41.0 35.0 41.0 18 38.7581909678502 40.0 38.0 41.0 35.0 41.0 19 38.78592738554776 40.0 38.0 41.0 35.0 41.0 20 38.76263961687021 40.0 38.0 41.0 35.0 41.0 21 38.67232237475293 40.0 38.0 41.0 35.0 41.0 22 38.65273056581198 40.0 38.0 41.0 35.0 41.0 23 38.57140546788029 40.0 38.0 41.0 34.0 41.0 24 38.4925329939949 40.0 38.0 41.0 34.0 41.0 25 38.47078890713529 40.0 38.0 41.0 34.0 41.0 26 38.30267897802062 40.0 38.0 41.0 34.0 41.0 27 38.21787862003722 40.0 38.0 41.0 34.0 41.0 28 38.123663566129956 40.0 38.0 41.0 34.0 41.0 29 38.03485535050819 40.0 38.0 41.0 33.0 41.0 30 37.96175693972832 40.0 37.0 41.0 33.0 41.0 31 37.91917466829688 40.0 37.0 41.0 33.0 41.0 32 37.77337060705789 40.0 37.0 41.0 33.0 41.0 33 37.65463964848559 40.0 37.0 41.0 33.0 41.0 34 37.58430393568945 40.0 37.0 41.0 33.0 41.0 35 37.50351690723743 40.0 37.0 41.0 32.0 41.0 36 37.36811917053398 40.0 37.0 41.0 32.0 41.0 37 37.30647403981958 40.0 37.0 41.0 32.0 41.0 38 37.233332461883705 40.0 36.0 41.0 32.0 41.0 39 37.132835066808774 39.0 36.0 41.0 31.0 41.0 40 37.00939888823294 39.0 36.0 41.0 31.0 41.0 41 36.92732657291084 39.0 36.0 41.0 31.0 41.0 42 36.719831781849 39.0 35.0 41.0 30.0 41.0 43 35.42555884747341 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 1.0 12 2.0 13 1.0 14 3.0 15 16.0 16 34.0 17 46.0 18 57.0 19 156.0 20 273.0 21 485.0 22 891.0 23 1458.0 24 2434.0 25 3701.0 26 5531.0 27 7980.0 28 11541.0 29 15742.0 30 20777.0 31 27409.0 32 35610.0 33 47720.0 34 66746.0 35 92190.0 36 137037.0 37 227938.0 38 455136.0 39 483852.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.98090613332329 17.532492404708503 11.153845920004573 26.332755541963643 2 18.00806070639707 21.17470599214844 34.21392304937654 26.60331025207795 3 20.489928980908566 23.839031499256127 28.553310525672604 27.117728994162704 4 14.46616515753884 14.963985824149168 33.42317371010762 37.14667530820437 5 15.057190401813264 36.774586583283124 32.856163996281545 15.312059018622067 6 35.483827820198464 33.03777004552007 16.18221160539869 15.29619052888278 7 29.578135288298846 30.085562167088508 21.381361151626763 18.954941392985887 8 28.093428317289543 32.75207643140161 20.45016655834345 18.704328692965394 9 28.29369960158539 13.65249466642428 18.84477394697979 39.20903178501054 10 17.620650681037883 25.718991542277365 31.807262904395696 24.85309487228906 11 36.777748121468726 21.238483945161903 20.604352343702974 21.37941558966639 12 22.588035158736577 25.266830782924533 28.672962586235514 23.47217147210338 13 30.64393844971543 18.56126909006675 24.742805828660437 26.051986631557376 14 23.568051197462985 20.263818201826517 24.31083027464647 31.857300326064024 15 27.113169083318084 25.74616861091132 21.53603332747638 25.604628978294215 16 25.527657683236978 24.8235466500159 24.80731336740904 24.841482299338082 17 25.469898812538418 25.52644170701174 24.420146537294904 24.583512943154936 18 25.820464758273047 23.0035950337099 26.17005792302749 25.00588228498956 19 25.78258709885704 25.05683168882682 25.209071912225973 23.951509300090166 20 25.141159640046716 23.81683993314563 25.649437702194046 25.39256272461361 21 25.639892288825965 24.61664829529253 25.628218917063734 24.115240498817766 22 25.790490944321053 24.179626439943846 24.0987032221546 25.931179393580493 23 23.81915028797357 24.34232405888 25.428859614936812 26.40966603820962 24 24.43370467220625 26.012528203048575 24.64066382574088 24.913103299004298 25 25.30373566136035 24.4593009717474 23.923602645721072 26.31336072117118 26 25.106504317627582 24.983265127200234 24.905321051162808 25.004909504009376 27 25.998483677647133 24.420146537294904 23.793067597942326 25.788302187115637 28 24.57767625727382 25.218921319650356 25.08212399431166 25.12127842876416 29 24.672036012351885 24.695625951121404 25.368060803675167 25.264277232851544 30 24.369744322759 25.86022718083816 25.759665947011406 24.010362549391434 31 26.26265451257897 24.530678776168568 23.866147769078818 25.340518942173638 32 23.72065621372971 25.190589073602432 24.777217955834526 26.31153675683333 33 24.03243251787941 24.847379784030462 25.247800754999638 25.872386943090486 34 24.686810123488463 24.75952550175739 25.325988026282108 25.227676348472034 35 25.016947668639183 25.397183434269493 25.58730131708465 23.998567580006675 36 24.818621946303708 25.263182854248832 24.690032460485334 25.22816273896213 37 25.01567089360269 25.06522192478093 25.20986229677237 24.70924488484401 38 24.773387630725043 24.670759237315394 25.65101847128685 24.904834660672716 39 25.130519848075934 23.841585049329115 25.23272264980675 25.7951724527882 40 25.062303581840368 24.67580553865011 25.651140068909374 24.610750810600152 41 23.596505041133437 24.984906695104296 26.03210542027482 25.386482843487446 42 25.302215691078807 25.17380860169422 25.77766239514485 23.746313312082123 43 24.280309271393126 23.561241730601683 25.93245616861699 26.2259928293882 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 24.0 1 67.5 2 111.0 3 682.0 4 1253.0 5 1253.0 6 1733.0 7 2213.0 8 2133.0 9 2053.0 10 2571.0 11 3089.0 12 3089.0 13 4683.5 14 6278.0 15 7816.5 16 9355.0 17 8353.0 18 7351.0 19 7351.0 20 7993.5 21 8636.0 22 7895.5 23 7155.0 24 8931.5 25 10708.0 26 10708.0 27 12648.0 28 14588.0 29 16649.0 30 18710.0 31 21446.5 32 24183.0 33 24183.0 34 29006.0 35 33829.0 36 41456.0 37 49083.0 38 58517.5 39 67952.0 40 67952.0 41 74360.0 42 80768.0 43 87536.5 44 94305.0 45 107746.5 46 121188.0 47 121188.0 48 148669.5 49 176151.0 50 179982.0 51 183813.0 52 160695.5 53 137578.0 54 137578.0 55 132492.0 56 127406.0 57 122082.0 58 116758.0 59 109877.0 60 102996.0 61 102996.0 62 87668.0 63 72340.0 64 63721.5 65 55103.0 66 47477.5 67 39852.0 68 39852.0 69 32967.5 70 26083.0 71 22429.5 72 18776.0 73 14207.5 74 9639.0 75 9639.0 76 7703.5 77 5768.0 78 4815.0 79 3862.0 80 3126.5 81 2391.0 82 2391.0 83 2016.5 84 1642.0 85 1367.5 86 1093.0 87 743.0 88 393.0 89 393.0 90 286.0 91 179.0 92 122.5 93 66.0 94 55.0 95 44.0 96 44.0 97 23.0 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1644769.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.22988459067541 #Duplication Level Percentage of deduplicated Percentage of total 1 84.05283437092118 43.900698387123676 2 8.287053399728075 8.656636853291232 3 2.7530828886761824 4.313796046323608 4 1.3681528188515002 2.858338553240844 5 0.8126783203218592 2.122304743987732 6 0.531581323352992 1.6658658701571165 7 0.36895783169793805 1.3489437477886401 8 0.2734977264005494 1.1427803748570253 9 0.21398123215384743 1.0058593553969375 >10 1.1501397562017928 10.869574268780845 >50 0.0866049982645852 3.1691429598121474 >100 0.08410311462606215 9.417561637853508 >500 0.011981332461438062 4.291174416952695 >1k 0.005118239109740531 4.416574162055206 >5k 2.3264723226093325E-4 0.8207486223787903 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 7815 0.4751427100097339 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 5694 0.34618843132379074 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 4267 0.25942852765342733 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3653 0.22209805753877898 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 3105 0.18878030896739906 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 2779 0.1689598964961037 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2644 0.160752056975782 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 2445 0.14865309353471523 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 2380 0.14470117080270847 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 2290 0.13922927778916067 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 2280 0.13862128967654425 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 2219 0.13491256218958406 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2204 0.13400058002065943 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 1835 0.11156581866511345 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 1760 0.1070059078204903 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT 1731 0.10524274229390268 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC 1678 0.10202040529703563 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 6.079881126164221E-5 0.0 9 0.0 0.0 0.0 6.079881126164221E-5 0.0 10 0.0 0.0 0.0 1.2159762252328442E-4 0.0 11 0.0 0.0 0.0 1.2159762252328442E-4 0.0 12 0.0 0.0 0.0 3.0399405630821105E-4 0.0 13 0.0 0.0 0.0 3.6479286756985327E-4 0.0 14 0.0 0.0 0.0 5.471893013547799E-4 0.0 15 0.0 0.0 0.0 6.079881126164221E-4 1.2159762252328442E-4 16 0.0 0.0 0.0 0.0010335797914479176 1.8239643378492663E-4 17 0.0 0.0 0.0 0.0015807690928026975 1.8239643378492663E-4 18 0.0 0.0 0.0 0.0018847631491109085 2.4319524504656884E-4 19 0.0 0.0 0.0 0.0026143488842506153 2.4319524504656884E-4 20 0.0 0.0 0.0 0.003404733430651964 2.4319524504656884E-4 21 0.0 0.0 0.0 0.005532691824809441 3.0399405630821105E-4 22 0.0 0.0 0.0 0.009241419311769616 3.6479286756985327E-4 23 0.0 0.0 0.0 0.015503696871718764 4.255916788314955E-4 24 0.0 0.0 0.0 0.025961092408721225 4.255916788314955E-4 25 0.0 0.0 0.0 0.03264896164750187 4.255916788314955E-4 26 0.0 0.0 0.0 0.04170798452548656 4.255916788314955E-4 27 0.0 0.0 0.0 0.057880468321083386 4.863904900931377E-4 28 0.0 0.0 0.0 0.09302218123031258 4.863904900931377E-4 29 0.0 0.0 0.0 0.12670472266926236 4.863904900931377E-4 30 0.0 0.0 0.0 0.1780189193740884 4.863904900931377E-4 31 0.0 0.0 0.0 0.31366106729881216 5.471893013547799E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 480 0.0 17.34375 5 GTAATAC 115 1.2429155E-6 16.086956 3 CAAGACG 565 0.0 15.38938 4 TGCACCG 145 5.349466E-8 15.310345 5 CGAGCCG 655 0.0 15.251907 15 ACGAGTC 85 5.3658965E-4 15.235294 26 GACGGAC 525 0.0 15.15238 7 TCGCGGT 75 0.004105405 14.8 17 AGGCCCG 740 0.0 14.75 10 TACCGCA 665 0.0 14.744361 28 TCGTTTA 340 0.0 14.691176 30 AAGGCGT 140 5.9988633E-7 14.535715 6 ACGGACC 550 0.0 14.463636 8 TAACGCC 405 0.0 14.160494 4 CTTATAC 720 0.0 14.131945 37 TTTGCGC 355 0.0 14.070422 17 TGGATAC 715 0.0 13.972028 24 CGGACCA 570 0.0 13.95614 9 ATACCGC 690 0.0 13.942029 27 TTTCGGA 505 0.0 13.920793 30 >>END_MODULE