##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727062.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5904107 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.14771988380292 33.0 31.0 34.0 30.0 34.0 2 32.310735560856195 34.0 31.0 34.0 30.0 34.0 3 32.42010112621604 34.0 31.0 34.0 30.0 34.0 4 35.982022852905615 37.0 35.0 37.0 35.0 37.0 5 35.76868068278573 37.0 35.0 37.0 35.0 37.0 6 35.80948380508686 37.0 35.0 37.0 35.0 37.0 7 35.76778757566555 37.0 35.0 37.0 35.0 37.0 8 35.77430066900888 37.0 35.0 37.0 35.0 37.0 9 37.54772466013912 39.0 37.0 39.0 35.0 39.0 10 37.404612585781386 39.0 37.0 39.0 34.0 39.0 11 37.47056328755559 39.0 37.0 39.0 35.0 39.0 12 37.40150186980012 39.0 37.0 39.0 35.0 39.0 13 37.43300485577243 39.0 37.0 39.0 35.0 39.0 14 38.66829022576996 40.0 38.0 41.0 35.0 41.0 15 38.57161904416705 40.0 38.0 41.0 34.0 41.0 16 38.513027795736086 40.0 38.0 41.0 34.0 41.0 17 38.55314105926603 40.0 38.0 41.0 34.0 41.0 18 38.55098527177776 40.0 38.0 41.0 34.0 41.0 19 38.59725035471071 40.0 38.0 41.0 34.0 41.0 20 38.563470817856114 40.0 38.0 41.0 34.0 41.0 21 38.45990917847526 40.0 38.0 41.0 34.0 41.0 22 38.42216054011216 40.0 38.0 41.0 34.0 41.0 23 38.32542804525731 40.0 38.0 41.0 34.0 41.0 24 38.236105477085694 40.0 38.0 41.0 34.0 41.0 25 38.19743442996545 40.0 38.0 41.0 34.0 41.0 26 37.99160211696705 40.0 37.0 41.0 33.0 41.0 27 37.87752965859189 40.0 37.0 41.0 33.0 41.0 28 37.76317316064902 40.0 37.0 41.0 33.0 41.0 29 37.641663506437126 40.0 37.0 41.0 33.0 41.0 30 37.53387243828745 40.0 37.0 41.0 33.0 41.0 31 37.4382701736266 39.0 36.0 41.0 33.0 41.0 32 37.24990383812489 39.0 36.0 41.0 32.0 41.0 33 37.081389107616104 39.0 36.0 41.0 31.0 41.0 34 36.97090499884233 39.0 35.0 41.0 31.0 41.0 35 36.84214683101102 39.0 35.0 41.0 31.0 41.0 36 36.63262945607185 39.0 35.0 40.0 30.0 41.0 37 36.532178024551385 39.0 35.0 40.0 30.0 41.0 38 36.419438197851086 39.0 35.0 40.0 30.0 41.0 39 36.25873785824003 39.0 35.0 40.0 30.0 41.0 40 36.07709463937561 39.0 35.0 40.0 29.0 41.0 41 35.937769420506775 39.0 35.0 40.0 28.0 41.0 42 35.6610708444139 39.0 35.0 40.0 27.0 41.0 43 34.430514724750076 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 24.0 10 28.0 11 39.0 12 38.0 13 32.0 14 29.0 15 77.0 16 161.0 17 206.0 18 359.0 19 649.0 20 1287.0 21 2566.0 22 4424.0 23 7496.0 24 12306.0 25 19406.0 26 29062.0 27 41976.0 28 58422.0 29 78774.0 30 100752.0 31 126678.0 32 158767.0 33 205176.0 34 274129.0 35 368407.0 36 539958.0 37 881307.0 38 1574051.0 39 1417517.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.963683754376405 18.370703647477935 12.102592314129808 24.563020284015856 2 17.49099398096952 22.245447109952448 35.39724127628446 24.86631763279358 3 20.609196276422498 25.316004604930093 29.022085812469182 25.052713306178227 4 14.477362961070996 15.660573224706123 33.66922381318631 36.19284000103657 5 14.34870675616143 37.780548353883155 32.886361984970804 14.984382904984614 6 33.665548405542104 33.75460505712379 16.777846336456978 15.802000200877117 7 27.850545391538468 31.312084960519854 22.510940265818352 18.326429382123326 8 27.39061131514046 33.361996996328145 21.16187934940881 18.08551233912258 9 27.958605763750555 13.92320633755452 20.46043542232551 37.65775247636942 10 17.81920618986072 26.472843395283995 32.1536008747809 23.554349540074394 11 34.580606347412065 22.261622291059428 21.668306485637878 21.48946487589063 12 21.688512758999796 26.626109587783553 29.88841496266921 21.796962690547446 13 29.64035035272904 19.38606464957359 26.688608455097445 24.284976542599924 14 22.70255264682703 21.245990291165114 26.639693352440936 29.41176370956692 15 25.867857747158034 26.643876880957613 23.79462296330334 23.69364240858101 16 23.427979879090945 25.82200830709877 26.981675636976092 23.768336176834193 17 23.44684810082202 26.72698851833139 26.451858003250955 23.37430537759563 18 23.568915671751885 24.142787385120222 28.682085199336665 23.606211743791228 19 23.765998820820826 25.689337947296686 28.39992567885372 22.144737553028765 20 23.437210741607494 24.650891320228443 28.619958953995923 23.29193898416814 21 24.210384398521235 25.365156830660418 28.382073698867583 22.04238507195076 22 24.05135950280034 24.968449928160176 27.165835578521868 23.814354990517618 23 22.503199891194384 25.350218077009785 28.23656481835441 23.910017213441424 24 22.59591501305786 26.803172774477158 27.743314950084745 22.85759726238024 25 23.27701716787992 25.621165063573542 27.16121167858238 23.940606089964156 26 23.202679084237463 26.10913047476951 27.87669667910829 22.811493761884734 27 23.7587326923445 25.815284174219745 26.99722413567369 23.428758997762067 28 22.539869280824348 26.42521553217108 28.158229517181855 22.87668566982272 29 22.73915428700733 26.130725611849513 28.40429551835697 22.725824582786185 30 22.630399482936202 26.859845189120048 28.414678121517785 22.095077206425966 31 23.61625559970373 26.019514890228105 27.15989056431396 23.204338945754202 32 21.827602379157423 26.636559940394033 27.731695919467587 23.804141760980958 33 22.03732080058847 26.12672839431941 28.237242312851034 23.59870849224108 34 22.622438922600825 26.101407037507958 28.29360985497045 22.982544184920766 35 22.81332299702563 26.40150322478912 28.395301778914238 22.389871999271016 36 22.327728816567856 26.467609750297548 27.81502774255277 23.389633690581828 37 22.440260652457688 26.25179387839685 28.239884541387884 23.068060927757575 38 22.285995155575602 25.712254198645113 28.640927408666546 23.360823237112744 39 22.4267785119748 25.221849807261282 28.41315375890037 23.938217921863544 40 22.492732601221487 25.696688762585097 28.81045346908516 23.00012516710825 41 21.188386321589363 26.117717717514267 29.095492341178776 23.598403619717597 42 22.289873811568796 26.354891603421144 28.648820219552256 22.706414365457807 43 21.355354840283212 25.312735693983868 28.727680578959696 24.604228886773225 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1333.0 1 1842.5 2 2352.0 3 8526.5 4 14701.0 5 14701.0 6 20192.5 7 25684.0 8 24411.0 9 23138.0 10 30465.0 11 37792.0 12 37792.0 13 55706.0 14 73620.0 15 89108.0 16 104596.0 17 91288.0 18 77980.0 19 77980.0 20 80667.5 21 83355.0 22 68975.5 23 54596.0 24 60669.5 25 66743.0 26 66743.0 27 74914.5 28 83086.0 29 90406.5 30 97727.0 31 106881.0 32 116035.0 33 116035.0 34 134644.0 35 153253.0 36 180071.5 37 206890.0 38 235930.0 39 264970.0 40 264970.0 41 289152.5 42 313335.0 43 335783.0 44 358231.0 45 399980.0 46 441729.0 47 441729.0 48 499097.5 49 556466.0 50 556535.5 51 556605.0 52 499048.5 53 441492.0 54 441492.0 55 420421.0 56 399350.0 57 379272.0 58 359194.0 59 333840.0 60 308486.0 61 308486.0 62 260417.0 63 212348.0 64 185890.0 65 159432.0 66 135607.0 67 111782.0 68 111782.0 69 92371.0 70 72960.0 71 63391.0 72 53822.0 73 40199.0 74 26576.0 75 26576.0 76 21178.5 77 15781.0 78 13407.5 79 11034.0 80 9078.0 81 7122.0 82 7122.0 83 6014.5 84 4907.0 85 4168.5 86 3430.0 87 2307.0 88 1184.0 89 1184.0 90 863.5 91 543.0 92 386.0 93 229.0 94 204.5 95 180.0 96 180.0 97 98.0 98 16.0 99 19.0 100 22.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5904107.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.20461189309003 #Duplication Level Percentage of deduplicated Percentage of total 1 82.06347576060595 37.917110481167995 2 9.24824830934692 8.546234476486008 3 3.0255351743152348 4.193810354943837 4 1.5085963088423133 2.788164278136291 5 0.8860426076133213 2.0469627402757484 6 0.5857347789135827 1.6238188879192192 7 0.4331828875662448 1.4010533039108477 8 0.30954645171398965 1.144197893146242 9 0.24421627912156332 1.0155526555307741 >10 1.477442695937706 12.731971948168605 >50 0.11646532998643153 3.7128994585801163 >100 0.08005519912521199 7.55103630587495 >500 0.011349505729424066 3.7229656010235908 >1k 0.009561308049611635 7.930563138785433 >5k 2.919483373908895E-4 0.9023032651141722 >10k+ 2.5545479521702836E-4 2.7713552109365214 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 41191 0.6976668952646015 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 33293 0.5638956069054982 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 30201 0.5115252823161911 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24729 0.4188440351775467 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 13511 0.2288407035983596 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 10756 0.18217827014313936 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10677 0.1808402185123 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9625 0.1630221132509963 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8275 0.1401566739898176 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 7440 0.12601397637271816 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6599 0.11176965458112463 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 5.081208724706378E-5 1.693736241568793E-5 2 0.0 0.0 0.0 6.774944966275171E-5 1.693736241568793E-5 3 0.0 0.0 0.0 8.468681207843963E-5 1.693736241568793E-5 4 0.0 0.0 0.0 8.468681207843963E-5 1.693736241568793E-5 5 0.0 0.0 0.0 8.468681207843963E-5 1.693736241568793E-5 6 0.0 0.0 0.0 1.0162417449412756E-4 6.774944966275171E-5 7 0.0 0.0 0.0 1.185615369098155E-4 8.468681207843963E-5 8 5.081208724706378E-5 0.0 0.0 1.185615369098155E-4 1.0162417449412756E-4 9 5.081208724706378E-5 0.0 0.0 1.3549889932550343E-4 1.863109865725672E-4 10 5.081208724706378E-5 0.0 0.0 2.8793516106669477E-4 1.863109865725672E-4 11 5.081208724706378E-5 0.0 0.0 7.791186711216447E-4 1.863109865725672E-4 12 5.081208724706378E-5 0.0 0.0 0.001354988993255034 1.863109865725672E-4 13 5.081208724706378E-5 0.0 0.0 0.0017276109664001685 1.863109865725672E-4 14 5.081208724706378E-5 0.0 0.0 0.002709977986510068 2.37123073819631E-4 15 5.081208724706378E-5 0.0 0.0 0.00376009445628272 2.540604362353189E-4 16 5.081208724706378E-5 0.0 0.0 0.007469376825318376 2.7099779865100685E-4 17 5.081208724706378E-5 0.0 0.0 0.011161721831938344 2.7099779865100685E-4 18 5.081208724706378E-5 0.0 0.0 0.013380516308393462 3.048725234823827E-4 19 5.081208724706378E-5 0.0 0.0 0.017835042623719388 3.048725234823827E-4 20 5.081208724706378E-5 0.0 0.0 0.022458942563202192 3.048725234823827E-4 21 5.081208724706378E-5 0.0 0.0 0.032502798475705134 3.048725234823827E-4 22 6.774944966275171E-5 0.0 0.0 0.047831111461902706 3.048725234823827E-4 23 6.774944966275171E-5 0.0 0.0 0.07508332758874459 4.403714228078861E-4 24 6.774944966275171E-5 0.0 0.0 0.11830747647358017 4.57308785223574E-4 25 6.774944966275171E-5 0.0 0.0 0.13866618609723705 4.74246147639262E-4 26 6.774944966275171E-5 0.0 0.0 0.16835738241193798 4.74246147639262E-4 27 6.774944966275171E-5 0.0 0.0 0.22255694214213936 4.74246147639262E-4 28 6.774944966275171E-5 0.0 0.0 0.33771406920640157 4.74246147639262E-4 29 6.774944966275171E-5 0.0 0.0 0.45598767095515036 4.74246147639262E-4 30 6.774944966275171E-5 0.0 0.0 0.6328984213870108 4.74246147639262E-4 31 6.774944966275171E-5 0.0 0.0 1.0073326923106238 4.911835100549498E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1395 0.0 15.2508955 5 TCTAGCG 1190 0.0 14.613446 28 GCGTTAT 1075 0.0 14.455813 1 CTAGCGG 1205 0.0 14.431535 29 CGCAATA 1190 0.0 14.302522 36 CAAGACG 1545 0.0 14.249192 4 GTACTAG 365 0.0 14.191782 1 CGGTCCA 1345 0.0 13.754645 10 TAGCGGC 1275 0.0 13.639215 30 ACCGTAT 195 1.0286385E-8 13.28205 8 TACTTAC 1050 0.0 13.214287 31 GTACCGT 280 0.0 13.214285 6 CGCTTCG 1345 0.0 13.20446 32 GCGCAAT 1295 0.0 13.142858 35 GTATTAG 1565 0.0 13.121406 1 ACGGACC 1650 0.0 13.118182 8 TACCGTA 170 3.7390237E-7 13.058824 7 GCGCAAG 1605 0.0 13.024922 1 GTAAACG 1365 0.0 13.010988 27 ATACCGT 1095 0.0 12.840182 6 >>END_MODULE