SRR2727060.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2727060.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4639915
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	35980	0.7754452398373677	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	29239	0.6301624059923512	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	26397	0.5689112839351582	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19369	0.41744299195136114	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7019	0.15127432291324303	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6886	0.1484078910928325	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5399	0.11635989021350607	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5207	0.11222188337501873	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4694	0.10116564635343536	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACTTAC	1320	0.0	15.136365	31
TACGCGT	110	1.4536799E-5	15.136364	5
CAAGACG	820	0.0	15.115853	4
CTTATAC	4630	0.0	14.544276	37
AGTGTAC	1555	0.0	14.514468	27
AAGACGG	885	0.0	14.423728	5
GTCTAAT	320	0.0	13.875001	1
CTACAGT	1820	0.0	13.417582	23
GGAGTGT	1820	0.0	12.807692	6
GTCCTAT	975	0.0	12.71282	1
TCTTATA	6890	0.0	12.566037	37
TACGGAT	1215	0.0	12.333333	27
CGCAATA	765	0.0	12.333333	36
GTGTACT	1705	0.0	12.260997	28
GTATAGG	470	0.0	12.202128	1
TAGTACT	335	0.0	12.149253	4
AACGCCG	770	0.0	12.012986	5
TTACGGA	1205	0.0	11.975102	26
GGCGCAA	1210	0.0	11.925619	34
CATGGGT	3235	0.0	11.894899	4