##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727060.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4639915 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.24060052824244 33.0 31.0 34.0 30.0 34.0 2 32.414758028972514 34.0 31.0 34.0 31.0 34.0 3 32.52278651656334 34.0 31.0 34.0 31.0 34.0 4 36.06325977954337 37.0 35.0 37.0 35.0 37.0 5 35.86711114319982 37.0 35.0 37.0 35.0 37.0 6 35.90134517550429 37.0 35.0 37.0 35.0 37.0 7 35.86538632712022 37.0 35.0 37.0 35.0 37.0 8 35.87047844626464 37.0 35.0 37.0 35.0 37.0 9 37.66161923224887 39.0 37.0 39.0 35.0 39.0 10 37.52268586816784 39.0 37.0 39.0 35.0 39.0 11 37.59354837319218 39.0 37.0 39.0 35.0 39.0 12 37.52115006417144 39.0 37.0 39.0 35.0 39.0 13 37.54856241978571 39.0 37.0 39.0 35.0 39.0 14 38.80400115088315 40.0 38.0 41.0 35.0 41.0 15 38.71497408896499 40.0 38.0 41.0 35.0 41.0 16 38.6717668319355 40.0 38.0 41.0 35.0 41.0 17 38.70915523236956 40.0 38.0 41.0 35.0 41.0 18 38.7069181224225 40.0 38.0 41.0 35.0 41.0 19 38.76065078778383 40.0 38.0 41.0 35.0 41.0 20 38.71959766504343 40.0 38.0 41.0 35.0 41.0 21 38.62502028593196 40.0 38.0 41.0 34.0 41.0 22 38.58444217189324 40.0 38.0 41.0 34.0 41.0 23 38.498499433718074 40.0 38.0 41.0 34.0 41.0 24 38.4208755979366 40.0 38.0 41.0 34.0 41.0 25 38.37737760282246 40.0 38.0 41.0 34.0 41.0 26 38.18290873862991 40.0 38.0 41.0 34.0 41.0 27 38.074814301555094 40.0 37.0 41.0 33.0 41.0 28 37.97427258904527 40.0 37.0 41.0 33.0 41.0 29 37.86822991369454 40.0 37.0 41.0 33.0 41.0 30 37.77406310244908 40.0 37.0 41.0 33.0 41.0 31 37.68311380704172 40.0 37.0 41.0 33.0 41.0 32 37.52275160213064 40.0 36.0 41.0 33.0 41.0 33 37.36874856543708 40.0 36.0 41.0 32.0 41.0 34 37.2735800117028 40.0 36.0 41.0 32.0 41.0 35 37.156236913822774 39.0 36.0 41.0 32.0 41.0 36 36.95342975032948 39.0 35.0 41.0 31.0 41.0 37 36.87546582211097 39.0 35.0 41.0 31.0 41.0 38 36.783932248758866 39.0 35.0 41.0 31.0 41.0 39 36.62978459734715 39.0 35.0 41.0 30.0 41.0 40 36.47173105541804 39.0 35.0 41.0 30.0 41.0 41 36.34118599155372 39.0 35.0 41.0 30.0 41.0 42 36.083039021188966 39.0 35.0 40.0 29.0 41.0 43 34.85426176988156 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 8.0 10 28.0 11 33.0 12 30.0 13 15.0 14 25.0 15 60.0 16 95.0 17 140.0 18 207.0 19 405.0 20 765.0 21 1472.0 22 2774.0 23 4621.0 24 7787.0 25 12224.0 26 18636.0 27 27719.0 28 39172.0 29 53917.0 30 70752.0 31 90215.0 32 114126.0 33 149803.0 34 202264.0 35 275741.0 36 403777.0 37 665932.0 38 1202598.0 39 1294573.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.63247710356763 18.34693092438116 12.374946523804855 24.64564544824636 2 17.612434710549653 21.692466349060275 36.04492754716412 24.650171393225953 3 20.19655532482815 24.70073266428372 29.620348648628266 25.482363362259868 4 14.213988833847171 15.419808337006174 34.14913850792525 36.2170643212214 5 14.055343686252872 38.0244896727634 33.10534783503577 14.814818805947954 6 33.51212252810666 34.467721930250875 16.60879563526487 15.411359906377594 7 27.953378456286377 31.661097239927887 22.06378780645766 18.321736497328075 8 27.534513024484287 33.72475573367185 20.627662360194098 18.11306888164977 9 28.19693895254547 13.719432360291083 20.139162032063087 37.94446665510036 10 17.46635444830347 26.849026329146113 32.382705286627015 23.301913935923395 11 34.997580774647815 22.203165359710255 21.58477041066485 21.214483454977085 12 21.59472748961996 26.474773783571464 30.038804590170294 21.89169413663828 13 29.82828349226225 19.705942889039992 26.421389184931186 24.044384433766567 14 22.519162527761825 21.161745419905323 26.852259146988683 29.46683290534417 15 25.57109343597889 27.178450467303822 23.756792958491697 23.493663138225592 16 23.439222485756744 26.126319124380508 26.474148772121904 23.96030961774084 17 23.161351016128528 26.71988603239499 26.32936163701275 23.789401314463735 18 23.147579212119187 24.87401170064538 28.432482060554985 23.545927026680445 19 23.816319911032853 25.365658638143156 28.586299533504384 22.231721917319604 20 23.55737120184314 24.76650973132051 28.451361716755585 23.224757350080765 21 24.268181636948093 25.2162593495786 28.48756927659235 22.027989736880958 22 24.18658531460167 24.78707045279924 27.50778839698572 23.518555835613366 23 22.90794120150908 25.298265162185086 28.407977301308325 23.385816334997518 24 22.766537749075145 26.16881990295081 27.999219813293998 23.065422534680053 25 23.250296611037054 25.471910584568896 27.640204615817314 23.63758818857673 26 23.09654379444451 25.94564771121885 28.129092882089434 22.82871561224721 27 23.513792817325317 25.984333764734913 27.38246282528883 23.119410592650944 28 22.565478031386352 26.404190594008725 28.063078741744192 22.96725263286073 29 22.764059255395843 26.284274604168395 28.3950244778191 22.556641662616663 30 22.97380447702167 26.515916778647885 28.138144772048623 22.37213397228182 31 23.335578345724006 26.049184090656833 27.65128240495785 22.96395515866131 32 22.206915428407633 26.576672201969213 27.800811006236103 23.415601363387044 33 22.173488091915477 26.024550018696463 28.238922480260953 23.563039409127107 34 22.784512216279822 26.081404508487765 28.441296877205723 22.692786398026687 35 22.880160520181946 26.181470996774724 28.288794083512304 22.649574399531026 36 22.257067209205342 26.30218441501622 28.05954419423632 23.38120418154212 37 22.313124270595473 26.044528832963536 28.46093085756959 23.1814160388714 38 22.299158497515577 25.50507929563365 28.730806491067185 23.464955715783585 39 22.068680137459413 25.340162481424766 28.91708145515597 23.67407592595985 40 22.392112786548893 25.417211306672645 29.21245324537195 22.978222661406512 41 21.28349333985644 25.880344790798972 29.442479010930157 23.393682858414433 42 21.778653272743142 26.05666267593264 29.162775611191154 23.00190844013306 43 21.060234939648677 25.387792664305277 29.02813952410766 24.523832871938385 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1708.0 1 2006.5 2 2305.0 3 6311.0 4 10317.0 5 10317.0 6 14073.0 7 17829.0 8 16930.0 9 16031.0 10 22366.5 11 28702.0 12 28702.0 13 42475.5 14 56249.0 15 68830.5 16 81412.0 17 70374.5 18 59337.0 19 59337.0 20 61394.5 21 63452.0 22 52099.0 23 40746.0 24 47211.5 25 53677.0 26 53677.0 27 60492.0 28 67307.0 29 74572.5 30 81838.0 31 90680.5 32 99523.0 33 99523.0 34 115430.5 35 131338.0 36 151646.0 37 171954.0 38 195559.0 39 219164.0 40 219164.0 41 238512.5 42 257861.0 43 274242.5 44 290624.0 45 316716.0 46 342808.0 47 342808.0 48 370252.5 49 397697.0 50 401856.0 51 406015.0 52 382234.0 53 358453.0 54 358453.0 55 342057.0 56 325661.0 57 307373.0 58 289085.0 59 266255.5 60 243426.0 61 243426.0 62 206290.0 63 169154.0 64 146525.5 65 123897.0 66 104418.0 67 84939.0 68 84939.0 69 69948.5 70 54958.0 71 46701.5 72 38445.0 73 29470.5 74 20496.0 75 20496.0 76 16440.5 77 12385.0 78 10428.0 79 8471.0 80 6813.5 81 5156.0 82 5156.0 83 4328.0 84 3500.0 85 2939.0 86 2378.0 87 1630.5 88 883.0 89 883.0 90 647.5 91 412.0 92 289.0 93 166.0 94 146.5 95 127.0 96 127.0 97 73.0 98 19.0 99 14.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4639915.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.59196011659131 #Duplication Level Percentage of deduplicated Percentage of total 1 83.08576314652085 42.86557378511856 2 8.686065082824307 8.96262246646376 3 2.9662884458374275 4.591099055758505 4 1.410842485698543 2.9115251701180713 5 0.8361298411415807 2.156878870823413 6 0.5689493526024164 1.7611927384694588 7 0.3968149698398117 1.4330723468349362 8 0.2934339815016103 1.2111067416386936 9 0.21451577686895437 0.9960560464142424 >10 1.3575361792590244 12.88397403493477 >50 0.10286546677041504 3.672035440403016 >100 0.0673905285222368 7.037089768877329 >500 0.008867112735486923 3.113857466852981 >1k 0.004204592822075532 3.4937948891180786 >5k 1.665185276069417E-4 0.5264360586159259 >10k+ 1.665185276069417E-4 2.383685119558098 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 35980 0.7754452398373677 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 29239 0.6301624059923512 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 26397 0.5689112839351582 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19369 0.41744299195136114 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7019 0.15127432291324303 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6886 0.1484078910928325 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5399 0.11635989021350607 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5207 0.11222188337501873 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4694 0.10116564635343536 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.465635685136473E-5 2 0.0 0.0 0.0 0.0 6.465635685136473E-5 3 0.0 0.0 0.0 0.0 6.465635685136473E-5 4 0.0 0.0 0.0 2.155211895045491E-5 1.0776059475227455E-4 5 0.0 0.0 0.0 2.155211895045491E-5 1.0776059475227455E-4 6 0.0 0.0 0.0 2.155211895045491E-5 1.2931271370272945E-4 7 2.155211895045491E-5 0.0 0.0 6.465635685136473E-5 1.5086483265318437E-4 8 6.465635685136473E-5 0.0 0.0 1.0776059475227455E-4 1.5086483265318437E-4 9 6.465635685136473E-5 0.0 0.0 1.0776059475227455E-4 1.939690705540942E-4 10 6.465635685136473E-5 0.0 0.0 1.939690705540942E-4 1.939690705540942E-4 11 8.620847580181964E-5 0.0 0.0 5.388029737613728E-4 1.939690705540942E-4 12 8.620847580181964E-5 0.0 0.0 7.758762822163768E-4 2.155211895045491E-4 13 8.620847580181964E-5 0.0 0.0 0.0010776059475227455 2.3707330845500402E-4 14 1.2931271370272945E-4 0.0 0.0 0.0015517525644327536 2.3707330845500402E-4 15 1.2931271370272945E-4 0.0 0.0 0.002694014868806864 2.586254274054589E-4 16 1.2931271370272945E-4 0.0 0.0 0.005215612786010088 3.663860221577335E-4 17 1.2931271370272945E-4 0.0 0.0 0.007801867060064678 3.663860221577335E-4 18 1.2931271370272945E-4 0.0 0.0 0.009202754791844247 4.0949026005864333E-4 19 1.2931271370272945E-4 0.0 0.0 0.011681248471146563 4.0949026005864333E-4 20 1.2931271370272945E-4 0.0 0.0 0.013771804009340688 4.0949026005864333E-4 21 1.2931271370272945E-4 0.0 0.0 0.019504667650161695 4.0949026005864333E-4 22 1.2931271370272945E-4 0.0 0.0 0.02883673515570867 4.0949026005864333E-4 23 1.2931271370272945E-4 0.0 0.0 0.04444046927583803 5.172508548109178E-4 24 1.2931271370272945E-4 0.0 0.0 0.0682124564781898 5.388029737613728E-4 25 1.2931271370272945E-4 0.0 0.0 0.07717813796157903 5.388029737613728E-4 26 1.2931271370272945E-4 0.0 0.0 0.09021716992660427 5.603550927118277E-4 27 1.2931271370272945E-4 0.0 0.0 0.12379537125141302 5.603550927118277E-4 28 1.2931271370272945E-4 0.0 0.0 0.20957280467422357 5.603550927118277E-4 29 1.2931271370272945E-4 0.0 0.0 0.3122255472352403 5.819072116622826E-4 30 1.5086483265318437E-4 0.0 0.0 0.46386625617064103 5.819072116622826E-4 31 1.5086483265318437E-4 0.0 0.0 0.8496707375027345 6.034593306127375E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACTTAC 1320 0.0 15.136365 31 TACGCGT 110 1.4536799E-5 15.136364 5 CAAGACG 820 0.0 15.115853 4 CTTATAC 4630 0.0 14.544276 37 AGTGTAC 1555 0.0 14.514468 27 AAGACGG 885 0.0 14.423728 5 GTCTAAT 320 0.0 13.875001 1 CTACAGT 1820 0.0 13.417582 23 GGAGTGT 1820 0.0 12.807692 6 GTCCTAT 975 0.0 12.71282 1 TCTTATA 6890 0.0 12.566037 37 TACGGAT 1215 0.0 12.333333 27 CGCAATA 765 0.0 12.333333 36 GTGTACT 1705 0.0 12.260997 28 GTATAGG 470 0.0 12.202128 1 TAGTACT 335 0.0 12.149253 4 AACGCCG 770 0.0 12.012986 5 TTACGGA 1205 0.0 11.975102 26 GGCGCAA 1210 0.0 11.925619 34 CATGGGT 3235 0.0 11.894899 4 >>END_MODULE