SRR2727059.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2727059.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3846167
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	30741	0.7992632665196284	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	23569	0.6127919042516874	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	21755	0.5656280655520157	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17114	0.44496247822832447	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6595	0.17146941357460557	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6267	0.1629414427402658	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC	5796	0.1506954846214426	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG	5061	0.13158554997741906	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4717	0.12264158056579447	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4375	0.11374961097633046	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3920	0.1019196514347921	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGACGG	845	0.0	18.171597	5
CAAGACG	875	0.0	17.971428	4
CTTATAC	3385	0.0	16.013294	37
GACGGAC	1005	0.0	15.094528	7
GTATTAG	890	0.0	14.966293	1
TCGTTAC	585	0.0	14.863248	23
ACGGACC	1030	0.0	14.728154	8
ACGTATG	80	0.0063021653	13.875	1
GTTACGG	965	0.0	13.803109	25
GGCGCAA	1060	0.0	13.787736	34
CGCAAGA	1130	0.0	13.752213	2
TCGTTTA	755	0.0	13.721855	30
CGTTACG	580	0.0	13.715517	24
CGCTTCG	770	0.0	13.694806	32
TCTAGCG	635	0.0	13.692913	28
CTAGCGG	640	0.0	13.5859375	29
CTAGACA	355	0.0	13.549295	4
GCGCAAG	1150	0.0	13.513043	1
TACTTAC	945	0.0	13.507936	31
ACGCTTC	850	0.0	13.494117	31