##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727059.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3846167 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.24790733215693 33.0 31.0 34.0 30.0 34.0 2 32.41531919960834 34.0 31.0 34.0 31.0 34.0 3 32.523446849811776 34.0 31.0 34.0 31.0 34.0 4 36.066146633778516 37.0 35.0 37.0 35.0 37.0 5 35.87005556440997 37.0 35.0 37.0 35.0 37.0 6 35.90653421965297 37.0 35.0 37.0 35.0 37.0 7 35.86823297064324 37.0 35.0 37.0 35.0 37.0 8 35.87556572556522 37.0 35.0 37.0 35.0 37.0 9 37.66812777500301 39.0 37.0 39.0 35.0 39.0 10 37.52934414964301 39.0 37.0 39.0 35.0 39.0 11 37.59409614819117 39.0 37.0 39.0 35.0 39.0 12 37.523644189136874 39.0 37.0 39.0 35.0 39.0 13 37.55164401337748 39.0 37.0 39.0 35.0 39.0 14 38.80971003079169 40.0 38.0 41.0 35.0 41.0 15 38.72181733138473 40.0 38.0 41.0 35.0 41.0 16 38.679979574469854 40.0 38.0 41.0 35.0 41.0 17 38.72094711436087 40.0 38.0 41.0 35.0 41.0 18 38.71761236576571 40.0 38.0 41.0 35.0 41.0 19 38.76309635021048 40.0 38.0 41.0 35.0 41.0 20 38.72798945027608 40.0 38.0 41.0 35.0 41.0 21 38.63255807665138 40.0 38.0 41.0 34.0 41.0 22 38.59288429233572 40.0 38.0 41.0 34.0 41.0 23 38.50172886408728 40.0 38.0 41.0 34.0 41.0 24 38.4178092110925 40.0 38.0 41.0 34.0 41.0 25 38.37786918768738 40.0 38.0 41.0 34.0 41.0 26 38.185202046609 40.0 38.0 41.0 34.0 41.0 27 38.07239519240844 40.0 37.0 41.0 33.0 41.0 28 37.96394306331472 40.0 37.0 41.0 33.0 41.0 29 37.85217360556627 40.0 37.0 41.0 33.0 41.0 30 37.74440085414908 40.0 37.0 41.0 33.0 41.0 31 37.64968369808175 40.0 37.0 41.0 33.0 41.0 32 37.477410367256546 40.0 36.0 41.0 33.0 41.0 33 37.312206932252295 40.0 36.0 41.0 32.0 41.0 34 37.20807936836856 39.0 36.0 41.0 32.0 41.0 35 37.08209419923784 39.0 36.0 41.0 31.0 41.0 36 36.87317659373605 39.0 35.0 41.0 31.0 41.0 37 36.77940531443382 39.0 35.0 41.0 31.0 41.0 38 36.671017665119585 39.0 35.0 41.0 31.0 41.0 39 36.50729232506025 39.0 35.0 41.0 30.0 41.0 40 36.33195386471778 39.0 35.0 41.0 30.0 41.0 41 36.190753027624645 39.0 35.0 41.0 30.0 41.0 42 35.91432535300729 39.0 35.0 40.0 28.0 41.0 43 34.68251534579752 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 19.0 11 39.0 12 29.0 13 28.0 14 24.0 15 48.0 16 106.0 17 124.0 18 190.0 19 374.0 20 691.0 21 1351.0 22 2304.0 23 4011.0 24 6664.0 25 10595.0 26 16325.0 27 24033.0 28 33802.0 29 45903.0 30 59845.0 31 75424.0 32 96120.0 33 124397.0 34 167877.0 35 227456.0 36 336437.0 37 556011.0 38 1003439.0 39 1052497.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.08207781929386 18.05847224002494 12.120274548661044 24.73917539202016 2 17.64988363739796 21.831839335109475 35.47924466098326 25.039032366509307 3 20.516815832489854 24.736471401267806 29.171874232190127 25.574838534052212 4 14.412868707989018 15.25183383872827 33.60527506995926 36.730022383323444 5 14.326809002313212 37.845340568935256 32.758431966162675 15.069418462588857 6 34.06773548834463 33.861322194278095 16.462857697026674 15.6080846203506 7 28.256755361896662 31.26655706837483 22.06409654078983 18.41259102893868 8 27.780098992061447 33.31407606585985 20.714025158033962 18.191799784044736 9 28.227947460419685 13.586097535546429 20.04634744149175 38.13960756254214 10 17.630955702131498 26.522145294263094 32.07154031533212 23.775358688273286 11 35.21529356369601 22.001098756242254 21.36813092099225 21.415476759069485 12 21.871385199862615 26.236380271579474 29.778582157249023 22.113652371308888 13 29.922387665434186 19.20439232097826 26.438581580050997 24.434638433536556 14 22.723688284986064 20.918982457079995 26.534235252915433 29.823094005018504 15 25.911485382719988 26.716234630477565 23.520325560486583 23.851954426315864 16 23.628173191647683 25.76853787160048 26.48025943751272 24.123029499239113 17 23.47903770169106 26.454025527232698 26.239344261442625 23.827592509633615 18 23.647413125847113 24.24247309074203 28.378096946908443 23.73201683650242 19 23.984579972736494 25.20501579884597 28.319675146711 22.49072908170654 20 23.65500509988256 24.468984316073637 28.24097341587092 23.635037168172886 21 24.454112366935703 25.027098407323443 28.289775248968645 22.2290139767722 22 24.273490984660835 24.57342595888322 27.19473699399948 23.958346062456467 23 22.789000061619788 25.081022222903997 28.24367740662327 23.88630030885294 24 22.909405649832678 26.20310038539668 27.718375203156803 23.169118761613834 25 23.49622364291514 25.245809659330966 27.229992873424376 24.02797382432952 26 23.296622325551645 25.87836149600368 27.844136773052234 22.980879405392436 27 23.879670331527468 25.672520199980912 26.998073666588063 23.449735801903557 28 22.69105839658028 26.278734126729287 27.951490405902813 23.07871707078762 29 22.885147732794753 26.098190744187654 28.19794356303301 22.81871795998458 30 22.96436946185644 26.56018316417358 28.045220085347307 22.430227288622675 31 23.602719278700064 26.054276894373018 27.093649339719256 23.249354487207654 32 22.215988021320968 26.523705288927914 27.46141808195016 23.79888860780096 33 22.20317006515838 26.02078900890159 27.950164410437715 23.825876515502316 34 22.931505574250934 26.119328671895943 28.028424142789433 22.92074161106369 35 23.125412911087846 26.250836222140123 28.019168174444843 22.60458269232719 36 22.483449106604056 26.540605231130108 27.54680178993788 23.429143872327955 37 22.56963881183526 26.24826223094317 28.046364081434845 23.135734875786724 38 22.541688907423936 25.667580216875656 28.250411383593065 23.540319492107336 39 22.438027261946765 25.336497349179066 28.28803325492627 23.937442133947904 40 22.76255815205112 25.61402040005023 28.56992429085893 23.053497157039722 41 21.501224465812328 26.044370928251425 28.862241291134783 23.59216331480146 42 22.39575140653019 26.254710208891087 28.530092427083897 22.819445957494825 43 21.533386355818664 25.371051231004788 28.495330545969534 24.600231867207015 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 825.0 1 1155.5 2 1486.0 3 5166.5 4 8847.0 5 8847.0 6 12449.5 7 16052.0 8 15097.5 9 14143.0 10 19422.0 11 24701.0 12 24701.0 13 36590.5 14 48480.0 15 59435.0 16 70390.0 17 60126.5 18 49863.0 19 49863.0 20 51276.0 21 52689.0 22 42760.0 23 32831.0 24 37446.5 25 42062.0 26 42062.0 27 46977.5 28 51893.0 29 56252.0 30 60611.0 31 66507.0 32 72403.0 33 72403.0 34 84455.0 35 96507.0 36 113719.5 37 130932.0 38 150623.5 39 170315.0 40 170315.0 41 185442.5 42 200570.0 43 214976.5 44 229383.0 45 254705.5 46 280028.0 47 280028.0 48 312115.5 49 344203.0 50 346567.5 51 348932.0 52 323166.0 53 297400.0 54 297400.0 55 285110.0 56 272820.0 57 258864.5 58 244909.0 59 228077.5 60 211246.0 61 211246.0 62 178995.5 63 146745.0 64 128156.0 65 109567.0 66 93203.0 67 76839.0 68 76839.0 69 64069.5 70 51300.0 71 44113.0 72 36926.0 73 27932.0 74 18938.0 75 18938.0 76 15162.0 77 11386.0 78 9590.5 79 7795.0 80 6389.0 81 4983.0 82 4983.0 83 4200.5 84 3418.0 85 2845.5 86 2273.0 87 1542.5 88 812.0 89 812.0 90 597.5 91 383.0 92 265.0 93 147.0 94 132.0 95 117.0 96 117.0 97 63.0 98 9.0 99 8.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3846167.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.367624893378355 #Duplication Level Percentage of deduplicated Percentage of total 1 82.27533904230825 40.61738075816201 2 9.178109122972856 9.062028968268356 3 3.0836619610623113 4.56699200975111 4 1.4883297904188744 2.9390122724415764 5 0.8874028356928729 2.1904485160903002 6 0.5806104827979424 1.7198016314359275 7 0.41429061731968625 1.43167806548791 8 0.30595198607198393 1.2083298307028656 9 0.22896091649459763 1.0172930976674477 >10 1.3658434116261684 12.269125827898995 >50 0.09937065233437148 3.372894362432191 >100 0.0735306527555058 7.502046021142335 >500 0.012102140859999755 4.098197867658912 >1k 0.006077265524478062 4.981343423997297 >5k 2.0956088015441592E-4 0.6134636455734032 >10k+ 2.0956088015441592E-4 2.409963701289436 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 30741 0.7992632665196284 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23569 0.6127919042516874 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 21755 0.5656280655520157 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17114 0.44496247822832447 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6595 0.17146941357460557 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6267 0.1629414427402658 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 5796 0.1506954846214426 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 5061 0.13158554997741906 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4717 0.12264158056579447 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4375 0.11374961097633046 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3920 0.1019196514347921 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 2.5999911080304105E-5 0.0 4 0.0 0.0 0.0 5.199982216060821E-5 0.0 5 0.0 0.0 0.0 5.199982216060821E-5 0.0 6 0.0 0.0 0.0 5.199982216060821E-5 0.0 7 2.5999911080304105E-5 0.0 0.0 5.199982216060821E-5 2.5999911080304105E-5 8 5.199982216060821E-5 0.0 0.0 7.799973324091232E-5 2.5999911080304105E-5 9 5.199982216060821E-5 0.0 0.0 1.2999955540152054E-4 7.799973324091232E-5 10 5.199982216060821E-5 0.0 0.0 1.5599946648182464E-4 7.799973324091232E-5 11 5.199982216060821E-5 0.0 0.0 3.379988440439534E-4 7.799973324091232E-5 12 5.199982216060821E-5 0.0 0.0 6.239978659272986E-4 7.799973324091232E-5 13 5.199982216060821E-5 0.0 0.0 7.799973324091232E-4 7.799973324091232E-5 14 5.199982216060821E-5 0.0 0.0 0.0011179961764530765 1.5599946648182464E-4 15 5.199982216060821E-5 0.0 0.0 0.001507994842657638 1.5599946648182464E-4 16 5.199982216060821E-5 0.0 0.0 0.0036139876401622708 1.5599946648182464E-4 17 5.199982216060821E-5 0.0 0.0 0.0050699826606593005 1.5599946648182464E-4 18 5.199982216060821E-5 0.0 0.0 0.006343978303594202 1.5599946648182464E-4 19 5.199982216060821E-5 0.0 0.0 0.008709970211901875 1.5599946648182464E-4 20 5.199982216060821E-5 0.0 0.0 0.010919962653727725 1.5599946648182464E-4 21 5.199982216060821E-5 0.0 0.0 0.01627594433627037 1.5599946648182464E-4 22 5.199982216060821E-5 0.0 0.0 0.023763918727397953 1.5599946648182464E-4 23 5.199982216060821E-5 0.0 0.0 0.038401868665609164 2.0799928864243284E-4 24 5.199982216060821E-5 0.0 0.0 0.059435796729575184 2.0799928864243284E-4 25 5.199982216060821E-5 0.0 0.0 0.06952376222873317 2.3399919972273695E-4 26 5.199982216060821E-5 0.0 0.0 0.08452571092206865 2.3399919972273695E-4 27 5.199982216060821E-5 0.0 0.0 0.11611560288463814 2.3399919972273695E-4 28 5.199982216060821E-5 0.0 0.0 0.18920135293137297 2.3399919972273695E-4 29 5.199982216060821E-5 0.0 0.0 0.2773670514046842 2.3399919972273695E-4 30 5.199982216060821E-5 0.0 0.0 0.40627461054083197 2.3399919972273695E-4 31 5.199982216060821E-5 0.0 0.0 0.7248255210967178 2.599991108030411E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 845 0.0 18.171597 5 CAAGACG 875 0.0 17.971428 4 CTTATAC 3385 0.0 16.013294 37 GACGGAC 1005 0.0 15.094528 7 GTATTAG 890 0.0 14.966293 1 TCGTTAC 585 0.0 14.863248 23 ACGGACC 1030 0.0 14.728154 8 ACGTATG 80 0.0063021653 13.875 1 GTTACGG 965 0.0 13.803109 25 GGCGCAA 1060 0.0 13.787736 34 CGCAAGA 1130 0.0 13.752213 2 TCGTTTA 755 0.0 13.721855 30 CGTTACG 580 0.0 13.715517 24 CGCTTCG 770 0.0 13.694806 32 TCTAGCG 635 0.0 13.692913 28 CTAGCGG 640 0.0 13.5859375 29 CTAGACA 355 0.0 13.549295 4 GCGCAAG 1150 0.0 13.513043 1 TACTTAC 945 0.0 13.507936 31 ACGCTTC 850 0.0 13.494117 31 >>END_MODULE