SRR2727058.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2727058.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3771211
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	31244	0.8284871888632059	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	24513	0.6500034073935401	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	22062	0.58501102165856	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17293	0.45855296879437396	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC	10246	0.2716899160508388	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG	7998	0.2120804166088824	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6778	0.1797300654882477	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6072	0.1610092885282738	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA	5327	0.1412543609996895	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4697	0.1245488518144437	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4229	0.11213904499111824	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4061	0.10768424254171936	No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA	4009	0.10630537511690542	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTTAG	435	15.735633	1
TCTAGCG	755	15.192054	28
AACCGCG	430	15.058139	7
CTAGCGG	765	14.751634	29
ACGAACG	430	14.627907	15
CGCGGTC	405	14.617284	10
TCGTTAC	510	14.509804	23
CGTTACG	360	14.388888	24
CGGTCCA	840	14.095239	10
AAGACGG	750	14.059999	5
TCTAGAT	725	14.034483	2
CTTATAC	2885	13.850953	37
CGCAATA	815	13.846625	36
CTAGACA	335	13.805969	4
TACTTAC	780	13.756411	31
TACGGAT	850	13.494118	27
GTTACGG	720	13.361111	25
GCGCAAT	850	13.276471	35
CGCCGGT	845	13.136094	7
CGGCGCA	1090	13.068808	33