SRR2727057.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2727057.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3907760
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	32563	0.8332906831535201	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	25243	0.6459710934141298	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	22638	0.5793088623661637	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17183	0.4397148238376973	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6027	0.15423158024034228	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5851	0.1497277212520728	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4369	0.11180318136221262	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4342	0.11111224844923945	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4145	0.10607099719532417	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTATAC	2795	0.0	15.355993	37
AAGACGG	785	0.0	15.318471	5
GTTACGG	510	0.0	15.235295	25
TCTTATA	4460	0.0	14.476458	37
TACGGAT	745	0.0	14.154362	27
GTATTAC	210	1.364242E-10	14.095238	1
TTACGGA	785	0.0	13.904459	26
ACGGATG	775	0.0	13.845162	28
CAAGACG	925	0.0	13.6	4
ACGGACC	900	0.0	13.566666	8
GTATACG	150	1.3076824E-6	13.566666	1
AGACGGA	955	0.0	13.560209	6
CGTTACG	330	0.0	13.454545	24
GAGCGAA	910	0.0	13.417582	16
ATACCGT	765	0.0	13.300653	6
TCTAGCG	600	0.0	13.258332	28
CTATACT	420	0.0	13.214285	4
GTATTAG	800	0.0	13.181251	1
GCATTCG	760	0.0	13.144737	22
GGACCGT	255	1.6370905E-11	13.058825	6