##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727055.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3697162 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.18499595094832 33.0 31.0 34.0 30.0 34.0 2 32.34739835581995 34.0 31.0 34.0 30.0 34.0 3 32.45008171132344 34.0 31.0 34.0 30.0 34.0 4 36.008764019537146 37.0 35.0 37.0 35.0 37.0 5 35.80723944474167 37.0 35.0 37.0 35.0 37.0 6 35.84518395461167 37.0 35.0 37.0 35.0 37.0 7 35.80577778306712 37.0 35.0 37.0 35.0 37.0 8 35.81659094191707 37.0 35.0 37.0 35.0 37.0 9 37.5930527253066 39.0 37.0 39.0 35.0 39.0 10 37.45205295304885 39.0 37.0 39.0 35.0 39.0 11 37.518618605297796 39.0 37.0 39.0 35.0 39.0 12 37.449181831902415 39.0 37.0 39.0 35.0 39.0 13 37.477711011851795 39.0 37.0 39.0 35.0 39.0 14 38.699959861104276 40.0 38.0 41.0 35.0 41.0 15 38.60710918266497 40.0 38.0 41.0 34.0 41.0 16 38.56027217633417 40.0 38.0 41.0 34.0 41.0 17 38.61515427238514 40.0 38.0 41.0 34.0 41.0 18 38.62111451973162 40.0 38.0 41.0 35.0 41.0 19 38.68281914614507 40.0 38.0 41.0 34.0 41.0 20 38.65283344359809 40.0 38.0 41.0 34.0 41.0 21 38.55826090390413 40.0 38.0 41.0 34.0 41.0 22 38.51722780878955 40.0 38.0 41.0 34.0 41.0 23 38.424710358918546 40.0 38.0 41.0 34.0 41.0 24 38.34253976428406 40.0 38.0 41.0 34.0 41.0 25 38.299046403701 40.0 38.0 41.0 34.0 41.0 26 38.089879751009015 40.0 37.0 41.0 33.0 41.0 27 37.96890804352095 40.0 37.0 41.0 33.0 41.0 28 37.861666597244046 40.0 37.0 41.0 33.0 41.0 29 37.738216502279315 40.0 37.0 41.0 33.0 41.0 30 37.61682934099182 40.0 37.0 41.0 33.0 41.0 31 37.5034085604039 39.0 36.0 41.0 33.0 41.0 32 37.309498474776056 39.0 36.0 41.0 32.0 41.0 33 37.13291167657787 39.0 35.0 41.0 32.0 41.0 34 37.027204380008236 39.0 35.0 41.0 31.0 41.0 35 36.89287540010419 39.0 35.0 41.0 31.0 41.0 36 36.66848788340895 39.0 35.0 41.0 31.0 41.0 37 36.56820123110646 39.0 35.0 41.0 30.0 41.0 38 36.445079225633066 39.0 35.0 41.0 30.0 41.0 39 36.26473440979865 39.0 35.0 40.0 30.0 41.0 40 36.076733992181026 39.0 35.0 40.0 29.0 41.0 41 35.91744613841644 39.0 35.0 40.0 28.0 41.0 42 35.6139089928978 39.0 35.0 40.0 26.0 41.0 43 34.395063294494534 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 11.0 11 17.0 12 29.0 13 22.0 14 26.0 15 53.0 16 81.0 17 118.0 18 228.0 19 398.0 20 733.0 21 1365.0 22 2519.0 23 4345.0 24 7273.0 25 11329.0 26 17288.0 27 25603.0 28 35788.0 29 48088.0 30 61898.0 31 78246.0 32 98860.0 33 127749.0 34 169859.0 35 226649.0 36 332826.0 37 549969.0 38 945219.0 39 950569.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.658318461565926 18.061448213521615 12.14474778221782 24.13548554269464 2 17.693192778677265 22.09299998214847 35.3712928997972 24.842514339377068 3 20.729927441643074 24.945755690445807 29.35992526159254 24.964391606318575 4 14.360339092525564 15.308309454657385 33.436836146211604 36.89451530660545 5 14.120506485785583 38.437942400143676 32.49903574687828 14.942515367192458 6 33.86716622100952 33.801629466060724 16.528515656062677 15.802688656867078 7 28.1345799832412 31.66685690267291 21.79190416865693 18.40665894542895 8 28.411224609578916 33.01627031761119 20.44957727034953 18.122927802460374 9 28.490799158922435 13.33271303773002 20.031499836901926 38.14498796644561 10 17.75323883562581 27.09407918830714 31.81169772923123 23.340984246835816 11 34.92505873423994 22.227075794893487 21.21348753449267 21.634377936373898 12 21.9975213420456 26.771453347189006 29.643088401319716 21.587936909445677 13 30.20892782085286 19.269428821349997 26.496702064989307 24.024941292807835 14 22.825832354654732 21.106080826320298 26.93016968150165 29.137917137523324 15 25.943169382353275 26.758010603809083 23.95061401150396 23.348206002333683 16 23.23268496214123 25.710774913298362 27.00695831018495 24.049581814375458 17 23.153921845999715 26.619607147320025 26.580279684796064 23.646191321884192 18 23.118435167298593 24.199886291160624 28.967110448500772 23.71456809304001 19 23.550009439672916 25.087594214156695 29.273751055539353 22.088645290631028 20 23.423371764612966 24.49946742934175 29.07505811214115 23.002102693904135 21 24.1199330729895 24.84081032965285 29.098697866092966 21.940558731264684 22 23.929138079424163 24.70833033553845 27.98414026758903 23.378391317448358 23 22.622379003138082 25.231948180793808 28.940441343928125 23.20523147213998 24 22.46038988824401 26.43343732300613 28.3653786336655 22.74079415508436 25 23.04751590544315 25.54088784857142 28.02365706452679 23.38793918145864 26 22.994556365125465 26.016685230455145 28.50337637355355 22.485382030865836 27 23.164957337547015 25.98576962545866 27.840922307434727 23.00835072955959 28 22.299022872138146 26.48912868843724 28.74688747747597 22.464960961948652 29 22.462012754648025 26.363843402047298 28.839904770199414 22.334239073105262 30 22.447623339199094 27.02280830539749 28.697444147700317 21.832124207703096 31 23.072399856971373 26.545604439296955 27.818121034458322 22.56387466927335 32 21.709597794199983 27.044419476344288 28.22489249862462 23.021090230831106 33 21.772051102981152 26.583660656471096 28.63058205185491 23.01370618869284 34 22.34035186989372 26.655878211449757 28.633449115835337 22.37032080282119 35 22.445675899514274 26.89443957283992 28.619871133588408 22.040013394057386 36 21.894712755351268 27.149500076004244 28.117512838225643 22.838274330418844 37 22.009719887849112 26.9360390483295 28.4864174196316 22.567823644189787 38 21.901258316514127 26.48220445844678 28.707992779326414 22.908544445712682 39 21.929388000850384 26.098396553897285 28.735608555968064 23.236606889284268 40 22.094974469606687 26.384129232097486 29.02442468033589 22.496471617959937 41 21.000459271192337 26.806101544914725 29.240482294257053 22.95295688963589 42 21.75181936847777 26.965196548054966 28.912906710606677 22.37007737286059 43 21.057313690879653 26.195633299271172 28.85499742775675 23.892055582092425 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 460.0 1 788.0 2 1116.0 3 4661.0 4 8206.0 5 8206.0 6 11914.5 7 15623.0 8 14736.5 9 13850.0 10 19265.0 11 24680.0 12 24680.0 13 38206.0 14 51732.0 15 67307.0 16 82882.0 17 70844.0 18 58806.0 19 58806.0 20 60788.5 21 62771.0 22 49112.0 23 35453.0 24 40665.0 25 45877.0 26 45877.0 27 50847.5 28 55818.0 29 60147.0 30 64476.0 31 69887.0 32 75298.0 33 75298.0 34 85543.0 35 95788.0 36 111472.0 37 127156.0 38 144672.0 39 162188.0 40 162188.0 41 176886.5 42 191585.0 43 206128.0 44 220671.0 45 243087.0 46 265503.0 47 265503.0 48 294030.5 49 322558.0 50 322388.0 51 322218.0 52 300487.0 53 278756.0 54 278756.0 55 266985.0 56 255214.0 57 241675.5 58 228137.0 59 212166.0 60 196195.0 61 196195.0 62 167131.0 63 138067.0 64 119973.0 65 101879.0 66 86518.5 67 71158.0 68 71158.0 69 58624.5 70 46091.0 71 39011.0 72 31931.0 73 24685.5 74 17440.0 75 17440.0 76 13832.0 77 10224.0 78 8519.0 79 6814.0 80 5637.5 81 4461.0 82 4461.0 83 3683.0 84 2905.0 85 2408.0 86 1911.0 87 1292.5 88 674.0 89 674.0 90 502.5 91 331.0 92 232.0 93 133.0 94 119.0 95 105.0 96 105.0 97 58.5 98 12.0 99 10.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3697162.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.02961205011923 #Duplication Level Percentage of deduplicated Percentage of total 1 82.92230472056244 42.31493040192071 2 8.958507840137587 9.142983592603454 3 2.8841290667133617 4.415279621305658 4 1.4367977278169826 2.932769225799737 5 0.8450016027920936 2.1560051986104742 6 0.5675869426923118 1.737824489418116 7 0.400113798294709 1.4292356332015064 8 0.29551181143090416 1.2063882474837622 9 0.2281623161744409 1.0478731030954527 >10 1.2901770621551638 11.982666313283264 >50 0.08669963417609604 3.0235192850957664 >100 0.07013805624498565 7.46067191591262 >500 0.00991294721072304 3.519747234391145 >1k 0.004640102943105495 4.128897512721367 >5k 1.0545688507057941E-4 0.35046523364741483 >10k+ 2.1091377014115882E-4 3.150742991509507 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 38874 1.0514551431611598 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 30795 0.832936181860573 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 27550 0.745166157176775 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19878 0.5376556396500883 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6583 0.17805549229381887 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6442 0.1742417562443842 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4977 0.13461676821302393 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4901 0.13256113743460524 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 4599 0.12439270986773097 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 4593 0.12423042322732951 No Hit GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA 4565 0.12347308557212261 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4402 0.11906429850788254 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 3839 0.10383640208354407 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.409554680049184E-5 2 0.0 0.0 0.0 0.0 5.409554680049184E-5 3 0.0 0.0 0.0 0.0 5.409554680049184E-5 4 0.0 0.0 0.0 5.409554680049184E-5 5.409554680049184E-5 5 0.0 0.0 0.0 5.409554680049184E-5 5.409554680049184E-5 6 0.0 0.0 0.0 5.409554680049184E-5 8.114332020073776E-5 7 0.0 0.0 0.0 5.409554680049184E-5 8.114332020073776E-5 8 0.0 0.0 0.0 5.409554680049184E-5 8.114332020073776E-5 9 0.0 0.0 0.0 5.409554680049184E-5 1.3523886700122958E-4 10 0.0 0.0 0.0 1.3523886700122958E-4 1.3523886700122958E-4 11 0.0 0.0 0.0 3.7866882760344284E-4 1.3523886700122958E-4 12 0.0 0.0 0.0 5.680032414051643E-4 1.3523886700122958E-4 13 0.0 0.0 0.0 6.220987882056561E-4 1.3523886700122958E-4 14 0.0 0.0 0.0 0.0011089587094100827 1.8933441380172142E-4 15 0.0 0.0 0.0 0.0017581052710159847 2.1638218720196735E-4 16 0.0 0.0 0.0 0.0035162105420319693 2.1638218720196735E-4 17 0.0 0.0 0.0 0.005328411359848446 2.1638218720196735E-4 18 2.704777340024592E-5 0.0 0.0 0.006302131202257299 2.1638218720196735E-4 19 2.704777340024592E-5 0.0 0.0 0.008709383034879186 2.1638218720196735E-4 20 2.704777340024592E-5 0.0 0.0 0.010386344985694433 2.1638218720196735E-4 21 2.704777340024592E-5 0.0 0.0 0.015092657557337222 2.4342996060221326E-4 22 2.704777340024592E-5 0.0 0.0 0.022287365281802637 2.4342996060221326E-4 23 2.704777340024592E-5 0.0 0.0 0.034999818779918215 2.975255074027051E-4 24 2.704777340024592E-5 0.0 0.0 0.05477174113549799 2.975255074027051E-4 25 2.704777340024592E-5 0.0 0.0 0.06459008287978725 3.24573280802951E-4 26 2.704777340024592E-5 0.0 0.0 0.07668043758969718 3.24573280802951E-4 27 2.704777340024592E-5 0.0 0.0 0.09896780287149981 3.24573280802951E-4 28 2.704777340024592E-5 0.0 0.0 0.14776198608554345 3.24573280802951E-4 29 2.704777340024592E-5 0.0 0.0 0.20888995397009924 3.24573280802951E-4 30 2.704777340024592E-5 0.0 0.0 0.3081282345756015 3.24573280802951E-4 31 2.704777340024592E-5 0.0 0.0 0.5723849806960041 3.24573280802951E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 740 0.0 15.75 5 ATACCGT 580 0.0 15.310345 6 CTTATAC 2345 0.0 15.147121 37 TCTAGCG 560 0.0 14.866072 28 CTAGCGG 580 0.0 14.672414 29 TCTTATA 3885 0.0 14.666667 37 CAAGACG 815 0.0 14.527607 4 TCGTTAC 385 0.0 14.4155855 23 TCTAACG 90 8.280134E-4 14.388888 2 CGCAATA 625 0.0 14.208 36 TACCGTC 535 0.0 13.831776 7 CATGGGT 2655 0.0 13.58757 4 GCGTTAT 600 0.0 13.566667 1 TAGCGGC 615 0.0 13.536585 30 CGATCGG 315 0.0 13.507937 36 ACGGACC 865 0.0 13.473988 8 TATACCG 110 2.4586712E-4 13.454544 5 ATTAGAC 155 1.8905448E-6 13.129032 3 GACGGAC 890 0.0 13.095505 7 GCGCAAG 910 0.0 13.010988 1 >>END_MODULE