##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727054.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4849568 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.22258188770628 33.0 31.0 34.0 30.0 34.0 2 32.40860587994642 34.0 31.0 34.0 31.0 34.0 3 32.523473431035505 34.0 31.0 34.0 31.0 34.0 4 36.06476886188626 37.0 35.0 37.0 35.0 37.0 5 35.86252899227313 37.0 35.0 37.0 35.0 37.0 6 35.884823761621654 37.0 35.0 37.0 35.0 37.0 7 35.85335745369485 37.0 35.0 37.0 35.0 37.0 8 35.847368466634556 37.0 35.0 37.0 35.0 37.0 9 37.641849954470175 39.0 37.0 39.0 35.0 39.0 10 37.50054499699767 39.0 37.0 39.0 35.0 39.0 11 37.570657221426735 39.0 37.0 39.0 35.0 39.0 12 37.48907284112729 39.0 37.0 39.0 35.0 39.0 13 37.515251461573484 39.0 37.0 39.0 35.0 39.0 14 38.78852363756937 40.0 38.0 41.0 35.0 41.0 15 38.700870675491096 40.0 38.0 41.0 35.0 41.0 16 38.67008710878989 40.0 38.0 41.0 35.0 41.0 17 38.67646705850913 40.0 38.0 41.0 35.0 41.0 18 38.669347661482426 40.0 38.0 41.0 35.0 41.0 19 38.722870573213946 40.0 38.0 41.0 35.0 41.0 20 38.674817014628935 40.0 38.0 41.0 34.0 41.0 21 38.58321256656263 40.0 38.0 41.0 34.0 41.0 22 38.5423594431504 40.0 38.0 41.0 34.0 41.0 23 38.46743565612442 40.0 38.0 41.0 34.0 41.0 24 38.39174499666775 40.0 38.0 41.0 34.0 41.0 25 38.35425279117645 40.0 38.0 41.0 34.0 41.0 26 38.17082284442655 40.0 38.0 41.0 34.0 41.0 27 38.07268008201968 40.0 38.0 41.0 33.0 41.0 28 37.97478414572185 40.0 37.0 41.0 33.0 41.0 29 37.87388629255224 40.0 37.0 41.0 33.0 41.0 30 37.80083957993784 40.0 37.0 41.0 33.0 41.0 31 37.7353250846261 40.0 37.0 41.0 33.0 41.0 32 37.60558198173528 40.0 37.0 41.0 33.0 41.0 33 37.46304763640803 40.0 37.0 41.0 32.0 41.0 34 37.390065671828914 40.0 36.0 41.0 32.0 41.0 35 37.29926892457225 40.0 36.0 41.0 32.0 41.0 36 37.12260535371398 39.0 36.0 41.0 31.0 41.0 37 37.07184062580419 39.0 36.0 41.0 31.0 41.0 38 36.99791486581898 39.0 36.0 41.0 31.0 41.0 39 36.87025297923444 39.0 36.0 41.0 31.0 41.0 40 36.74197742974219 39.0 35.0 41.0 30.0 41.0 41 36.64846415185848 39.0 35.0 41.0 30.0 41.0 42 36.420935019366674 39.0 35.0 41.0 30.0 41.0 43 35.18309465915315 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 9.0 10 8.0 11 24.0 12 22.0 13 21.0 14 23.0 15 47.0 16 88.0 17 146.0 18 219.0 19 442.0 20 859.0 21 1575.0 22 2921.0 23 4792.0 24 7961.0 25 12612.0 26 18965.0 27 27691.0 28 39520.0 29 53602.0 30 71312.0 31 91125.0 32 117992.0 33 152866.0 34 206812.0 35 283118.0 36 413473.0 37 677040.0 38 1284021.0 39 1380260.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.22402160357376 18.11082966565269 12.068580129199137 25.59656860157441 2 17.85561105648998 20.904026915387103 36.044983800618944 25.19537822750398 3 19.968294083101835 23.787314663904084 29.29609400259982 26.94829725039426 4 14.202419679443611 15.05824848728794 34.4612551056094 36.27807672765904 5 14.614023352183123 37.14730879121604 33.33253601145504 14.906131845145795 6 34.48311272261776 34.50416614428337 16.172162138978152 14.840558994120714 7 28.88319124507585 30.88466849005932 21.757010108941664 18.475130155923168 8 27.2663049574725 34.11211060449096 20.242483454196332 18.37910098384021 9 27.849490923727636 13.929426291166552 19.598694151726505 38.6223886333793 10 17.29737576625382 26.155731809513753 32.592964981623105 23.95392744260932 11 36.134331965238964 21.589840579614513 21.43467211924856 20.84115533589796 12 21.807839378682804 25.372796092352967 29.982773723350203 22.836590805614026 13 30.093051587275404 19.3380111383117 25.76470728939155 24.804229985021344 14 22.751263617707803 20.415735999577695 25.90302888834634 30.929971494368157 15 25.564338926683778 27.093526681139434 22.790627948716256 24.55150644346053 16 24.536185491161273 25.69055635471036 25.199069277923314 24.574188876205056 17 23.86130063543804 26.170557872371315 25.588526648146804 24.37961484404384 18 24.05898834700328 24.584643415660942 27.13165378854364 24.224714448792138 19 24.530597364548758 25.05674732264812 27.022551287042475 23.390104025760643 20 24.25444905608087 24.42137114068717 26.95623610185485 24.36794370137711 21 25.004474625368694 24.836067872437297 26.978918534599373 23.18053896759464 22 24.82544836983418 24.360066711096742 26.50304109561924 24.311443823449842 23 23.729556941979162 24.764762552045873 27.028531201129667 24.477149304845298 24 23.74314578123247 25.451937162237957 26.750073408600517 24.054843647929054 25 24.26884209067694 24.86972035447281 26.390659951566818 24.470777603283427 26 23.979950379085313 25.519139024341964 26.718586067872437 23.78232452870029 27 24.60433589136187 25.287448284053344 26.114037374050636 23.99417845053415 28 23.66342734033217 25.55644131601 26.74271192815525 24.037419415502576 29 23.58698754198312 25.75899544041861 26.97700083801279 23.67701617958548 30 23.882663363004706 25.78986416934457 26.839895842268835 23.48757662538189 31 24.155759853248785 25.370734053012555 26.39511395654211 24.07839213719655 32 23.3963932457489 25.644511016238976 26.47594589868623 24.483149839325893 33 23.23588410349128 25.182820407920868 26.888601211489355 24.692694277098497 34 24.06247319348857 25.26233264488713 27.085299144171195 23.5898950174531 35 24.153697813908373 25.24156790872919 27.000941114754962 23.603793162607474 36 23.322695959722598 25.60378573926585 26.868888115395023 24.204630185616534 37 23.619196596480347 25.08345073210645 27.19215402279131 24.105198648621897 38 23.33348042547295 24.69632346633762 27.527482860329002 24.44271324786043 39 23.360225075718084 24.549629987660758 27.65068971091858 24.439455225702577 40 23.591379685778197 24.60975905482715 27.978203419356117 23.820657840038535 41 22.484291384304747 25.031796646629147 28.296582293515627 24.18732967555048 42 23.128080686774574 25.122938785475323 28.024784888056008 23.72419563969409 43 22.37145659159744 24.435207424661332 28.015938739285644 25.17739724445559 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1026.0 1 1257.5 2 1489.0 3 4479.5 4 7470.0 5 7470.0 6 9822.0 7 12174.0 8 11232.5 9 10291.0 10 14183.0 11 18075.0 12 18075.0 13 27062.5 14 36050.0 15 44297.5 16 52545.0 17 46716.5 18 40888.0 19 40888.0 20 43688.0 21 46488.0 22 40420.5 23 34353.0 24 40406.0 25 46459.0 26 46459.0 27 54100.5 28 61742.0 29 69153.0 30 76564.0 31 86861.0 32 97158.0 33 97158.0 34 113709.5 35 130261.0 36 152602.5 37 174944.0 38 200171.5 39 225399.0 40 225399.0 41 246469.0 42 267539.0 43 286953.0 44 306367.0 45 333911.5 46 361456.0 47 361456.0 48 389096.5 49 416737.0 50 421354.0 51 425971.0 52 413286.5 53 400602.0 54 400602.0 55 385484.5 56 370367.0 57 350376.0 58 330385.0 59 305589.5 60 280794.0 61 280794.0 62 239299.0 63 197804.0 64 172040.0 65 146276.0 66 124050.0 67 101824.0 68 101824.0 69 83419.5 70 65015.0 71 55078.5 72 45142.0 73 34204.5 74 23267.0 75 23267.0 76 18480.5 77 13694.0 78 11494.5 79 9295.0 80 7493.0 81 5691.0 82 5691.0 83 4765.0 84 3839.0 85 3171.5 86 2504.0 87 1688.5 88 873.0 89 873.0 90 659.5 91 446.0 92 298.5 93 151.0 94 142.0 95 133.0 96 133.0 97 71.5 98 10.0 99 10.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4849568.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.94454747548096 #Duplication Level Percentage of deduplicated Percentage of total 1 82.5990244926902 42.90568949188961 2 8.932030447901697 9.279405593069425 3 2.969139027444844 4.626917495172363 4 1.4842015626940785 3.0838471414618245 5 0.8606907940569654 2.235409690680073 6 0.5948021510122692 1.8538037143065007 7 0.42004989392892295 1.5273511160083177 8 0.2943373460806191 1.2231376197833432 9 0.24486689292951067 1.1447549950455433 >10 1.4263200013032127 13.594204045471797 >50 0.0999803594166324 3.542269099355564 >100 0.060710001554787764 6.1570576232066765 >500 0.009139040053508424 3.296223544819691 >1k 0.004510174271949095 3.9344068981445455 >5k 3.9562932210060655E-5 0.1054255327163277 >10k+ 1.5825172884024262E-4 1.4900963988685163 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 23070 0.47571247583289894 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 19389 0.3998088077123571 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 17336 0.357475140053712 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12713 0.2621470613464952 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5130 0.10578261816310236 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.062039340411352E-5 2 0.0 0.0 0.0 0.0 2.062039340411352E-5 3 0.0 0.0 0.0 0.0 2.062039340411352E-5 4 0.0 0.0 0.0 2.062039340411352E-5 2.062039340411352E-5 5 0.0 0.0 0.0 2.062039340411352E-5 2.062039340411352E-5 6 0.0 0.0 0.0 2.062039340411352E-5 4.124078680822704E-5 7 0.0 0.0 0.0 2.062039340411352E-5 4.124078680822704E-5 8 0.0 0.0 0.0 2.062039340411352E-5 1.4434275382879466E-4 9 0.0 0.0 0.0 4.124078680822704E-5 1.6496314723290817E-4 10 0.0 0.0 0.0 1.031019670205676E-4 1.6496314723290817E-4 11 0.0 0.0 0.0 1.2372236042468111E-4 1.6496314723290817E-4 12 0.0 0.0 0.0 1.6496314723290817E-4 1.6496314723290817E-4 13 0.0 0.0 0.0 2.062039340411352E-4 1.6496314723290817E-4 14 0.0 0.0 0.0 4.124078680822704E-4 2.062039340411352E-4 15 0.0 0.0 0.0 8.866769163768814E-4 2.4744472084936223E-4 16 2.062039340411352E-5 0.0 0.0 0.0019176965865825575 2.886855076575893E-4 17 2.062039340411352E-5 0.0 0.0 0.002845614289767666 2.886855076575893E-4 18 2.062039340411352E-5 0.0 0.0 0.0033405037314663904 3.2992629446581634E-4 19 2.062039340411352E-5 0.0 0.0 0.004474625368692634 3.2992629446581634E-4 20 2.062039340411352E-5 0.0 0.0 0.005608747005918878 3.2992629446581634E-4 21 2.062039340411352E-5 0.0 0.0 0.007918231067179591 3.2992629446581634E-4 22 2.062039340411352E-5 0.0 0.0 0.011341216372262437 3.2992629446581634E-4 23 2.062039340411352E-5 0.0 0.0 0.018475872490085716 3.505466878699299E-4 24 2.062039340411352E-5 0.0 0.0 0.028579865258101342 3.7116708127404337E-4 25 2.062039340411352E-5 0.0 0.0 0.03326069456083511 3.917874746781569E-4 26 2.062039340411352E-5 0.0 0.0 0.040147905957809024 4.124078680822704E-4 27 2.062039340411352E-5 0.0 0.0 0.06509858197678639 4.3302826148638394E-4 28 2.062039340411352E-5 0.0 0.0 0.1279289206791203 4.536486548904975E-4 29 2.062039340411352E-5 0.0 0.0 0.2119982645876911 4.536486548904975E-4 30 2.062039340411352E-5 0.0 0.0 0.3266682723079664 4.536486548904975E-4 31 2.062039340411352E-5 0.0 0.0 0.6391497139539027 4.536486548904975E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAC 575 0.0 16.086956 23 CTTATAC 3775 0.0 15.437086 37 TAGATCG 110 1.4537069E-5 15.136364 5 TATACCG 220 1.8189894E-12 15.136364 5 TCTAGCG 825 0.0 14.575758 28 GTTACGG 865 0.0 13.901733 25 GTATTAC 365 0.0 13.684932 1 CAAGACG 1210 0.0 13.607439 4 CGTCGAT 110 2.4589174E-4 13.454545 26 CTAGCGG 895 0.0 13.435755 29 TCTTATA 5720 0.0 13.131118 37 CGTTACG 565 0.0 13.097344 24 ATACCGT 905 0.0 13.082872 6 GCGTTAT 775 0.0 12.890322 1 AAGACGG 1225 0.0 12.836734 5 CGTATAC 130 7.006863E-5 12.807693 3 GTCCTAA 440 0.0 12.613636 1 CGCAATA 955 0.0 12.591622 36 CGAGCCG 1135 0.0 12.550661 15 GTCCTAT 1170 0.0 12.491453 1 >>END_MODULE